RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
COMMD6-212ENST00000497707 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
COMMD6-212ENST00000497707 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
COMMD6-212ENST00000497707 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
COMMD6-212ENST00000497707 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
COMMD6-212ENST00000497707 CLIP1P30622 1438 aa17.56■□□□□ 0.4
COMMD6-212ENST00000497707 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
COMMD6-212ENST00000497707 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
COMMD6-212ENST00000497707 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
COMMD6-212ENST00000497707 CTTNBP2Q8WZ74 1663 aa17.54■□□□□ 0.4
COMMD6-212ENST00000497707 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
COMMD6-212ENST00000497707 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
COMMD6-212ENST00000497707 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
COMMD6-212ENST00000497707 FBLN2P98095 1184 aa17.47■□□□□ 0.39
COMMD6-212ENST00000497707 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
COMMD6-212ENST00000497707 NUP160Q12769 1436 aa17.46■□□□□ 0.39
COMMD6-212ENST00000497707 CHD1O14646 1710 aa17.44■□□□□ 0.38
COMMD6-212ENST00000497707 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
COMMD6-212ENST00000497707 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
COMMD6-212ENST00000497707 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
COMMD6-212ENST00000497707 SAMD9Q5K651 1589 aa17.39■□□□□ 0.37
COMMD6-212ENST00000497707 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
COMMD6-212ENST00000497707 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
COMMD6-212ENST00000497707 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
COMMD6-212ENST00000497707 FHOD3Q2V2M9 1422 aa17.34■□□□□ 0.37
COMMD6-212ENST00000497707 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
COMMD6-212ENST00000497707 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
COMMD6-212ENST00000497707 PPARGC1BQ86YN6 1023 aaKnown RBP17.29■□□□□ 0.36
COMMD6-212ENST00000497707 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
COMMD6-212ENST00000497707 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
COMMD6-212ENST00000497707 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
COMMD6-212ENST00000497707 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
COMMD6-212ENST00000497707 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
COMMD6-212ENST00000497707 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
COMMD6-212ENST00000497707 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
COMMD6-212ENST00000497707 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
COMMD6-212ENST00000497707 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
COMMD6-212ENST00000497707 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
COMMD6-212ENST00000497707 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
COMMD6-212ENST00000497707 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
COMMD6-212ENST00000497707 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
COMMD6-212ENST00000497707 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
COMMD6-212ENST00000497707 APLP2Q06481 763 aa17.12■□□□□ 0.33
COMMD6-212ENST00000497707 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-212ENST00000497707 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-212ENST00000497707 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
COMMD6-212ENST00000497707 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
COMMD6-212ENST00000497707 PLB1Q6P1J6 1458 aa17.08■□□□□ 0.32
COMMD6-212ENST00000497707 PTPRGP23470 1445 aa17.07■□□□□ 0.32
COMMD6-212ENST00000497707 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
COMMD6-212ENST00000497707 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
COMMD6-212ENST00000497707 ABCA8O94911 1581 aa17.06■□□□□ 0.32
COMMD6-212ENST00000497707 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
COMMD6-212ENST00000497707 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
COMMD6-212ENST00000497707 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
COMMD6-212ENST00000497707 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
COMMD6-212ENST00000497707 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
COMMD6-212ENST00000497707 MAGI3Q5TCQ9 1506 aa17.01■□□□□ 0.31
COMMD6-212ENST00000497707 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-212ENST00000497707 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
COMMD6-212ENST00000497707 ARID3CA6NKF2 412 aa17■□□□□ 0.31
COMMD6-212ENST00000497707 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
COMMD6-212ENST00000497707 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
COMMD6-212ENST00000497707 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
COMMD6-212ENST00000497707 ATP10BO94823 1461 aa16.97■□□□□ 0.31
COMMD6-212ENST00000497707 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
COMMD6-212ENST00000497707 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
COMMD6-212ENST00000497707 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
COMMD6-212ENST00000497707 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
COMMD6-212ENST00000497707 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
COMMD6-212ENST00000497707 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
COMMD6-212ENST00000497707 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
COMMD6-212ENST00000497707 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
COMMD6-212ENST00000497707 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
COMMD6-212ENST00000497707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
COMMD6-212ENST00000497707 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
COMMD6-212ENST00000497707 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
COMMD6-212ENST00000497707 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
COMMD6-212ENST00000497707 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
COMMD6-212ENST00000497707 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
COMMD6-212ENST00000497707 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
COMMD6-212ENST00000497707 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
COMMD6-212ENST00000497707 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
COMMD6-212ENST00000497707 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
COMMD6-212ENST00000497707 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
COMMD6-212ENST00000497707 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
COMMD6-212ENST00000497707 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
COMMD6-212ENST00000497707 KIF14Q15058 1648 aa16.79■□□□□ 0.28
COMMD6-212ENST00000497707 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.28
COMMD6-212ENST00000497707 MYOM3Q5VTT5 1437 aa16.77■□□□□ 0.27
COMMD6-212ENST00000497707 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
COMMD6-212ENST00000497707 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
COMMD6-212ENST00000497707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
COMMD6-212ENST00000497707 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
COMMD6-212ENST00000497707 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
COMMD6-212ENST00000497707 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
COMMD6-212ENST00000497707 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
COMMD6-212ENST00000497707 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
COMMD6-212ENST00000497707 CDC42BPAQ5VT25 1732 aa16.69■□□□□ 0.26
COMMD6-212ENST00000497707 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms