RNA–Protein interactions for RNA: ENST00000497056.6

PDCD10-218, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-218ENST00000497056 CLASP1Q7Z460 1538 aa14.88□□□□□ -0.03
PDCD10-218ENST00000497056 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
PDCD10-218ENST00000497056 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
PDCD10-218ENST00000497056 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
PDCD10-218ENST00000497056 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
PDCD10-218ENST00000497056 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
PDCD10-218ENST00000497056 NUP160Q12769 1436 aa14.83□□□□□ -0.04
PDCD10-218ENST00000497056 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
PDCD10-218ENST00000497056 CUL7Q14999 1698 aa14.8□□□□□ -0.04
PDCD10-218ENST00000497056 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
PDCD10-218ENST00000497056 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
PDCD10-218ENST00000497056 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
PDCD10-218ENST00000497056 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
PDCD10-218ENST00000497056 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
PDCD10-218ENST00000497056 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PDCD10-218ENST00000497056 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
PDCD10-218ENST00000497056 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
PDCD10-218ENST00000497056 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
PDCD10-218ENST00000497056 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
PDCD10-218ENST00000497056 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
PDCD10-218ENST00000497056 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
PDCD10-218ENST00000497056 POTEHQ6S545 545 aa14.64□□□□□ -0.07
PDCD10-218ENST00000497056 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
PDCD10-218ENST00000497056 EEA1Q15075 1411 aa14.61□□□□□ -0.07
PDCD10-218ENST00000497056 IQGAP2Q13576 1575 aa14.59□□□□□ -0.07
PDCD10-218ENST00000497056 CTTNBP2Q8WZ74 1663 aa14.54□□□□□ -0.08
PDCD10-218ENST00000497056 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
PDCD10-218ENST00000497056 UGGT2Q9NYU1 1516 aa14.52□□□□□ -0.08
PDCD10-218ENST00000497056 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
PDCD10-218ENST00000497056 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
PDCD10-218ENST00000497056 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
PDCD10-218ENST00000497056 KIF21BO75037 1637 aa14.5□□□□□ -0.09
PDCD10-218ENST00000497056 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
PDCD10-218ENST00000497056 KIAA0556O60303 1618 aa14.48□□□□□ -0.09
PDCD10-218ENST00000497056 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
PDCD10-218ENST00000497056 TNIKQ9UKE5 1360 aa14.46□□□□□ -0.1
PDCD10-218ENST00000497056 PTPRGP23470 1445 aa14.45□□□□□ -0.1
PDCD10-218ENST00000497056 ADCY10Q96PN6 1610 aa14.44□□□□□ -0.1
PDCD10-218ENST00000497056 GOLGA3Q08378 1498 aa14.42□□□□□ -0.1
PDCD10-218ENST00000497056 RANGAP1P46060 587 aaPredicted RBP14.41□□□□□ -0.1
PDCD10-218ENST00000497056 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
PDCD10-218ENST00000497056 SAMD9Q5K651 1589 aa14.39□□□□□ -0.11
PDCD10-218ENST00000497056 UACAQ9BZF9 1416 aa14.36□□□□□ -0.11
PDCD10-218ENST00000497056 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
PDCD10-218ENST00000497056 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
PDCD10-218ENST00000497056 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
PDCD10-218ENST00000497056 UHRF1BP1LA0JNW5 1464 aa14.34□□□□□ -0.11
PDCD10-218ENST00000497056 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
PDCD10-218ENST00000497056 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.11
PDCD10-218ENST00000497056 ABCA8O94911 1581 aa14.32□□□□□ -0.12
PDCD10-218ENST00000497056 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
PDCD10-218ENST00000497056 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDCD10-218ENST00000497056 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
PDCD10-218ENST00000497056 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
PDCD10-218ENST00000497056 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
PDCD10-218ENST00000497056 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
PDCD10-218ENST00000497056 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
PDCD10-218ENST00000497056 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
PDCD10-218ENST00000497056 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
PDCD10-218ENST00000497056 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
PDCD10-218ENST00000497056 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
PDCD10-218ENST00000497056 ABCC10Q5T3U5 1492 aa14.24□□□□□ -0.13
PDCD10-218ENST00000497056 RAPGEF6Q8TEU7 1601 aa14.23□□□□□ -0.13
PDCD10-218ENST00000497056 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
PDCD10-218ENST00000497056 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
PDCD10-218ENST00000497056 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
PDCD10-218ENST00000497056 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
PDCD10-218ENST00000497056 ATP10BO94823 1461 aa14.2□□□□□ -0.14
PDCD10-218ENST00000497056 NUP153P49790 1475 aaKnown RBP14.2□□□□□ -0.14
PDCD10-218ENST00000497056 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
PDCD10-218ENST00000497056 CLIP1P30622 1438 aa14.16□□□□□ -0.14
PDCD10-218ENST00000497056 EPRSP07814 1512 aaKnown RBP14.16□□□□□ -0.14
PDCD10-218ENST00000497056 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
PDCD10-218ENST00000497056 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
PDCD10-218ENST00000497056 GLI2P10070 1586 aa14.13□□□□□ -0.15
PDCD10-218ENST00000497056 CDK13Q14004 1512 aaKnown RBP14.13□□□□□ -0.15
PDCD10-218ENST00000497056 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
PDCD10-218ENST00000497056 PCF11O94913 1555 aaKnown RBP14.11□□□□□ -0.15
PDCD10-218ENST00000497056 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
PDCD10-218ENST00000497056 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
PDCD10-218ENST00000497056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
PDCD10-218ENST00000497056 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
PDCD10-218ENST00000497056 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
PDCD10-218ENST00000497056 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
PDCD10-218ENST00000497056 TSPOAP1O95153 1857 aa14.1□□□□□ -0.15
PDCD10-218ENST00000497056 HECW1Q76N89 1606 aa14.09□□□□□ -0.15
PDCD10-218ENST00000497056 LRRIQ1Q96JM4 1722 aa14.09□□□□□ -0.15
PDCD10-218ENST00000497056 MAP3K4Q9Y6R4 1608 aa14.08□□□□□ -0.15
PDCD10-218ENST00000497056 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
PDCD10-218ENST00000497056 CD109Q6YHK3 1445 aa14.03□□□□□ -0.16
PDCD10-218ENST00000497056 FYCO1Q9BQS8 1478 aa14.02□□□□□ -0.16
PDCD10-218ENST00000497056 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
PDCD10-218ENST00000497056 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
PDCD10-218ENST00000497056 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
PDCD10-218ENST00000497056 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
PDCD10-218ENST00000497056 TTC37Q6PGP7 1564 aa13.99□□□□□ -0.17
PDCD10-218ENST00000497056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDCD10-218ENST00000497056 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
PDCD10-218ENST00000497056 KDM6BO15054 1643 aa13.98□□□□□ -0.17
PDCD10-218ENST00000497056 CCDC18Q5T9S5 1454 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms