RNA–Protein interactions for RNA: ENST00000497056.6

PDCD10-218, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-218ENST00000497056 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
PDCD10-218ENST00000497056 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
PDCD10-218ENST00000497056 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
PDCD10-218ENST00000497056 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
PDCD10-218ENST00000497056 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
PDCD10-218ENST00000497056 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
PDCD10-218ENST00000497056 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
PDCD10-218ENST00000497056 ABCC9O60706 1549 aa18.47■□□□□ 0.55
PDCD10-218ENST00000497056 FOXD1Q16676 465 aa17.76■□□□□ 0.43
PDCD10-218ENST00000497056 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
PDCD10-218ENST00000497056 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
PDCD10-218ENST00000497056 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
PDCD10-218ENST00000497056 NACADO15069 1562 aa17.69■□□□□ 0.42
PDCD10-218ENST00000497056 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
PDCD10-218ENST00000497056 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
PDCD10-218ENST00000497056 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
PDCD10-218ENST00000497056 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
PDCD10-218ENST00000497056 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
PDCD10-218ENST00000497056 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
PDCD10-218ENST00000497056 MSH5O43196 834 aa17.14■□□□□ 0.33
PDCD10-218ENST00000497056 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
PDCD10-218ENST00000497056 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
PDCD10-218ENST00000497056 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
PDCD10-218ENST00000497056 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
PDCD10-218ENST00000497056 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
PDCD10-218ENST00000497056 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
PDCD10-218ENST00000497056 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
PDCD10-218ENST00000497056 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
PDCD10-218ENST00000497056 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
PDCD10-218ENST00000497056 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
PDCD10-218ENST00000497056 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
PDCD10-218ENST00000497056 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
PDCD10-218ENST00000497056 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
PDCD10-218ENST00000497056 ADRA2BP18089 450 aa16.3■□□□□ 0.2
PDCD10-218ENST00000497056 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
PDCD10-218ENST00000497056 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
PDCD10-218ENST00000497056 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
PDCD10-218ENST00000497056 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
PDCD10-218ENST00000497056 WIZO95785 1651 aa16.22■□□□□ 0.19
PDCD10-218ENST00000497056 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
PDCD10-218ENST00000497056 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
PDCD10-218ENST00000497056 NESP48681 1621 aa16.01■□□□□ 0.15
PDCD10-218ENST00000497056 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
PDCD10-218ENST00000497056 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
PDCD10-218ENST00000497056 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
PDCD10-218ENST00000497056 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
PDCD10-218ENST00000497056 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
PDCD10-218ENST00000497056 CFTRP13569 1480 aa15.79■□□□□ 0.12
PDCD10-218ENST00000497056 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
PDCD10-218ENST00000497056 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
PDCD10-218ENST00000497056 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
PDCD10-218ENST00000497056 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
PDCD10-218ENST00000497056 CUX2O14529 1486 aa15.67■□□□□ 0.1
PDCD10-218ENST00000497056 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
PDCD10-218ENST00000497056 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
PDCD10-218ENST00000497056 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
PDCD10-218ENST00000497056 WDR62O43379 1518 aa15.6■□□□□ 0.09
PDCD10-218ENST00000497056 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
PDCD10-218ENST00000497056 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
PDCD10-218ENST00000497056 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
PDCD10-218ENST00000497056 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
PDCD10-218ENST00000497056 CUX1P39880 1505 aa15.38■□□□□ 0.05
PDCD10-218ENST00000497056 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
PDCD10-218ENST00000497056 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
PDCD10-218ENST00000497056 IFT140Q96RY7 1462 aa15.33■□□□□ 0.05
PDCD10-218ENST00000497056 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
PDCD10-218ENST00000497056 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
PDCD10-218ENST00000497056 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
PDCD10-218ENST00000497056 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
PDCD10-218ENST00000497056 SYNJ1O43426 1573 aa15.27■□□□□ 0.03
PDCD10-218ENST00000497056 SOGA1O94964 1423 aa15.26■□□□□ 0.03
PDCD10-218ENST00000497056 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
PDCD10-218ENST00000497056 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
PDCD10-218ENST00000497056 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
PDCD10-218ENST00000497056 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.034e-11■■□□□ 13.7
PDCD10-218ENST00000497056 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
PDCD10-218ENST00000497056 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
PDCD10-218ENST00000497056 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
PDCD10-218ENST00000497056 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
PDCD10-218ENST00000497056 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
PDCD10-218ENST00000497056 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
PDCD10-218ENST00000497056 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
PDCD10-218ENST00000497056 GAPVD1Q14C86 1478 aa15.08■□□□□ 0
PDCD10-218ENST00000497056 GRIN2BQ13224 1484 aa15.07■□□□□ 0
PDCD10-218ENST00000497056 PBRM1Q86U86 1689 aa15.05■□□□□ -0
PDCD10-218ENST00000497056 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
PDCD10-218ENST00000497056 CHD1O14646 1710 aa15.03■□□□□ -0
PDCD10-218ENST00000497056 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PDCD10-218ENST00000497056 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
PDCD10-218ENST00000497056 FBLN2P98095 1184 aa15□□□□□ -0.01
PDCD10-218ENST00000497056 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
PDCD10-218ENST00000497056 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
PDCD10-218ENST00000497056 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
PDCD10-218ENST00000497056 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
PDCD10-218ENST00000497056 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
PDCD10-218ENST00000497056 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
PDCD10-218ENST00000497056 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
PDCD10-218ENST00000497056 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
PDCD10-218ENST00000497056 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
PDCD10-218ENST00000497056 IGF1RP08069 1367 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms