RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
SRRM1-220ENST00000496882 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
SRRM1-220ENST00000496882 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
SRRM1-220ENST00000496882 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SRRM1-220ENST00000496882 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
SRRM1-220ENST00000496882 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
SRRM1-220ENST00000496882 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
SRRM1-220ENST00000496882 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-220ENST00000496882 NUP160Q12769 1436 aa13.52□□□□□ -0.25
SRRM1-220ENST00000496882 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
SRRM1-220ENST00000496882 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
SRRM1-220ENST00000496882 CUL7Q14999 1698 aa13.43□□□□□ -0.26
SRRM1-220ENST00000496882 IGF1RP08069 1367 aa13.42□□□□□ -0.26
SRRM1-220ENST00000496882 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
SRRM1-220ENST00000496882 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
SRRM1-220ENST00000496882 PRG4Q92954 1404 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-220ENST00000496882 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
SRRM1-220ENST00000496882 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
SRRM1-220ENST00000496882 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
SRRM1-220ENST00000496882 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
SRRM1-220ENST00000496882 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
SRRM1-220ENST00000496882 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
SRRM1-220ENST00000496882 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SRRM1-220ENST00000496882 MSH5O43196 834 aa13.33□□□□□ -0.28
SRRM1-220ENST00000496882 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
SRRM1-220ENST00000496882 CARMIL2Q6F5E8 1435 aa13.29□□□□□ -0.28
SRRM1-220ENST00000496882 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
SRRM1-220ENST00000496882 IQGAP2Q13576 1575 aa13.25□□□□□ -0.29
SRRM1-220ENST00000496882 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
SRRM1-220ENST00000496882 PTPRGP23470 1445 aa13.23□□□□□ -0.29
SRRM1-220ENST00000496882 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
SRRM1-220ENST00000496882 ADCY10Q96PN6 1610 aa13.19□□□□□ -0.3
SRRM1-220ENST00000496882 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
SRRM1-220ENST00000496882 ZBTB22O15209 634 aa13.17□□□□□ -0.3
SRRM1-220ENST00000496882 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
SRRM1-220ENST00000496882 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
SRRM1-220ENST00000496882 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
SRRM1-220ENST00000496882 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-220ENST00000496882 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
SRRM1-220ENST00000496882 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
SRRM1-220ENST00000496882 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
SRRM1-220ENST00000496882 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
SRRM1-220ENST00000496882 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
SRRM1-220ENST00000496882 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
SRRM1-220ENST00000496882 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
SRRM1-220ENST00000496882 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
SRRM1-220ENST00000496882 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
SRRM1-220ENST00000496882 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
SRRM1-220ENST00000496882 EEA1Q15075 1411 aa13.1□□□□□ -0.31
SRRM1-220ENST00000496882 PLB1Q6P1J6 1458 aa13.09□□□□□ -0.31
SRRM1-220ENST00000496882 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
SRRM1-220ENST00000496882 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-220ENST00000496882 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
SRRM1-220ENST00000496882 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
SRRM1-220ENST00000496882 ZCCHC11Q5TAX3 1644 aaKnown RBP13.01□□□□□ -0.33
SRRM1-220ENST00000496882 TSPOAP1O95153 1857 aa13.01□□□□□ -0.33
SRRM1-220ENST00000496882 KDM6BO15054 1643 aa13□□□□□ -0.33
SRRM1-220ENST00000496882 P3H3Q8IVL6 736 aa13□□□□□ -0.33
SRRM1-220ENST00000496882 GLI2P10070 1586 aa12.99□□□□□ -0.33
SRRM1-220ENST00000496882 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
SRRM1-220ENST00000496882 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
SRRM1-220ENST00000496882 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
SRRM1-220ENST00000496882 ABCA8O94911 1581 aa12.97□□□□□ -0.33
SRRM1-220ENST00000496882 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
SRRM1-220ENST00000496882 TEX14Q8IWB6 1497 aa12.96□□□□□ -0.34
SRRM1-220ENST00000496882 KIF21BO75037 1637 aa12.93□□□□□ -0.34
SRRM1-220ENST00000496882 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
SRRM1-220ENST00000496882 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
SRRM1-220ENST00000496882 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
SRRM1-220ENST00000496882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-220ENST00000496882 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
SRRM1-220ENST00000496882 MAP3K4Q9Y6R4 1608 aa12.91□□□□□ -0.34
SRRM1-220ENST00000496882 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
SRRM1-220ENST00000496882 CD109Q6YHK3 1445 aa12.89□□□□□ -0.35
SRRM1-220ENST00000496882 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
SRRM1-220ENST00000496882 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
SRRM1-220ENST00000496882 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
SRRM1-220ENST00000496882 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
SRRM1-220ENST00000496882 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
SRRM1-220ENST00000496882 ATP10BO94823 1461 aa12.87□□□□□ -0.35
SRRM1-220ENST00000496882 MAGI3Q5TCQ9 1506 aa12.85□□□□□ -0.35
SRRM1-220ENST00000496882 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
SRRM1-220ENST00000496882 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
SRRM1-220ENST00000496882 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
SRRM1-220ENST00000496882 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
SRRM1-220ENST00000496882 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
SRRM1-220ENST00000496882 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
SRRM1-220ENST00000496882 ABCA9Q8IUA7 1624 aa12.78□□□□□ -0.36
SRRM1-220ENST00000496882 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
SRRM1-220ENST00000496882 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-220ENST00000496882 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
SRRM1-220ENST00000496882 NEO1Q92859 1461 aa12.74□□□□□ -0.37
SRRM1-220ENST00000496882 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
SRRM1-220ENST00000496882 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SRRM1-220ENST00000496882 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
SRRM1-220ENST00000496882 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
SRRM1-220ENST00000496882 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
SRRM1-220ENST00000496882 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
SRRM1-220ENST00000496882 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
SRRM1-220ENST00000496882 CLIP1P30622 1438 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms