RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 IGF1RP08069 1367 aa22.51■■□□□ 1.19
FN1-226ENST00000496542 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
FN1-226ENST00000496542 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
FN1-226ENST00000496542 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
FN1-226ENST00000496542 ADCY10Q96PN6 1610 aa22.28■■□□□ 1.16
FN1-226ENST00000496542 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
FN1-226ENST00000496542 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
FN1-226ENST00000496542 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
FN1-226ENST00000496542 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
FN1-226ENST00000496542 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
FN1-226ENST00000496542 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
FN1-226ENST00000496542 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
FN1-226ENST00000496542 PTPRGP23470 1445 aa22.19■■□□□ 1.14
FN1-226ENST00000496542 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
FN1-226ENST00000496542 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
FN1-226ENST00000496542 FAM69CQ0P6D2 419 aa22.14■■□□□ 1.13
FN1-226ENST00000496542 DIP2BQ9P265 1576 aa22.13■■□□□ 1.13
FN1-226ENST00000496542 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
FN1-226ENST00000496542 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
FN1-226ENST00000496542 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
FN1-226ENST00000496542 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
FN1-226ENST00000496542 CTTNBP2Q8WZ74 1663 aa22.05■■□□□ 1.12
FN1-226ENST00000496542 KIAA0556O60303 1618 aa22.05■■□□□ 1.12
FN1-226ENST00000496542 UACAQ9BZF9 1416 aa22.02■■□□□ 1.12
FN1-226ENST00000496542 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
FN1-226ENST00000496542 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.12
FN1-226ENST00000496542 PRXQ9BXM0 1461 aa21.99■■□□□ 1.11
FN1-226ENST00000496542 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
FN1-226ENST00000496542 PLB1Q6P1J6 1458 aa21.95■■□□□ 1.1
FN1-226ENST00000496542 KDM5BQ9UGL1 1544 aa21.92■■□□□ 1.1
FN1-226ENST00000496542 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
FN1-226ENST00000496542 KDM6BO15054 1643 aa21.91■■□□□ 1.1
FN1-226ENST00000496542 ZCCHC11Q5TAX3 1644 aaKnown RBP21.91■■□□□ 1.1
FN1-226ENST00000496542 GLI2P10070 1586 aa21.88■■□□□ 1.09
FN1-226ENST00000496542 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
FN1-226ENST00000496542 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
FN1-226ENST00000496542 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
FN1-226ENST00000496542 ABCA8O94911 1581 aa21.82■■□□□ 1.08
FN1-226ENST00000496542 MAP3K4Q9Y6R4 1608 aa21.79■■□□□ 1.08
FN1-226ENST00000496542 EEA1Q15075 1411 aa21.79■■□□□ 1.08
FN1-226ENST00000496542 WDR7Q9Y4E6 1490 aa21.78■■□□□ 1.08
FN1-226ENST00000496542 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
FN1-226ENST00000496542 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
FN1-226ENST00000496542 TEX14Q8IWB6 1497 aa21.72■■□□□ 1.07
FN1-226ENST00000496542 SAMD9Q5K651 1589 aa21.72■■□□□ 1.07
FN1-226ENST00000496542 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
FN1-226ENST00000496542 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
FN1-226ENST00000496542 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
FN1-226ENST00000496542 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
FN1-226ENST00000496542 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
FN1-226ENST00000496542 COL17A1Q9UMD9 1497 aaPredicted RBP21.65■■□□□ 1.06
FN1-226ENST00000496542 KIF21BO75037 1637 aa21.63■■□□□ 1.05
FN1-226ENST00000496542 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
FN1-226ENST00000496542 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
FN1-226ENST00000496542 ATP10BO94823 1461 aa21.62■■□□□ 1.05
FN1-226ENST00000496542 KDM4FA0A1W2PPD8 638 aa21.6■■□□□ 1.05
FN1-226ENST00000496542 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
FN1-226ENST00000496542 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
FN1-226ENST00000496542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
FN1-226ENST00000496542 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
FN1-226ENST00000496542 NUP153P49790 1475 aaKnown RBP21.53■■□□□ 1.04
FN1-226ENST00000496542 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
FN1-226ENST00000496542 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
FN1-226ENST00000496542 ADGRL1O94910 1474 aa21.51■■□□□ 1.03
FN1-226ENST00000496542 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
FN1-226ENST00000496542 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
FN1-226ENST00000496542 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
FN1-226ENST00000496542 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
FN1-226ENST00000496542 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
FN1-226ENST00000496542 NEO1Q92859 1461 aa21.37■■□□□ 1.01
FN1-226ENST00000496542 CDK13Q14004 1512 aaKnown RBP21.36■■□□□ 1.01
FN1-226ENST00000496542 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
FN1-226ENST00000496542 FMN1Q68DA7 1419 aa21.32■■□□□ 1
FN1-226ENST00000496542 RAPGEF3O95398 923 aa21.32■■□□□ 1
FN1-226ENST00000496542 HECW1Q76N89 1606 aa21.32■■□□□ 1
FN1-226ENST00000496542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.31■■□□□ 1
FN1-226ENST00000496542 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
FN1-226ENST00000496542 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
FN1-226ENST00000496542 FRMPD1Q5SYB0 1578 aa21.29■■□□□ 1
FN1-226ENST00000496542 CFAP74Q9C0B2 1584 aa21.27■■□□□ 1
FN1-226ENST00000496542 FANCAO15360 1455 aa21.26■□□□□ 0.99
FN1-226ENST00000496542 AKNAQ7Z591 1439 aa21.24■□□□□ 0.99
FN1-226ENST00000496542 DENND4BO75064 1496 aaPredicted RBP21.23■□□□□ 0.99
FN1-226ENST00000496542 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
FN1-226ENST00000496542 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
FN1-226ENST00000496542 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
FN1-226ENST00000496542 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
FN1-226ENST00000496542 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
FN1-226ENST00000496542 KIF14Q15058 1648 aa21.17■□□□□ 0.98
FN1-226ENST00000496542 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
FN1-226ENST00000496542 PLCH2O75038 1416 aa21.16■□□□□ 0.98
FN1-226ENST00000496542 PCF11O94913 1555 aaKnown RBP21.15■□□□□ 0.98
FN1-226ENST00000496542 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
FN1-226ENST00000496542 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
FN1-226ENST00000496542 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
FN1-226ENST00000496542 BCORL1Q5H9F3 1711 aa21.13■□□□□ 0.97
FN1-226ENST00000496542 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
FN1-226ENST00000496542 CLIP1P30622 1438 aa21.12■□□□□ 0.97
FN1-226ENST00000496542 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
FN1-226ENST00000496542 SCAPERQ9BY12 1400 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms