RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 KIF21BO75037 1637 aa15.93■□□□□ 0.14
PRPF3-207ENST00000496202 KIAA0586Q9BVV6 1533 aa15.92■□□□□ 0.14
PRPF3-207ENST00000496202 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
PRPF3-207ENST00000496202 IQGAP2Q13576 1575 aa15.9■□□□□ 0.14
PRPF3-207ENST00000496202 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
PRPF3-207ENST00000496202 RIMBP3CA6NJZ7 1639 aa15.89■□□□□ 0.13
PRPF3-207ENST00000496202 RIMBP3BA6NNM3 1639 aa15.89■□□□□ 0.13
PRPF3-207ENST00000496202 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
PRPF3-207ENST00000496202 RIMBP3Q9UFD9 1639 aa15.89■□□□□ 0.13
PRPF3-207ENST00000496202 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
PRPF3-207ENST00000496202 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
PRPF3-207ENST00000496202 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
PRPF3-207ENST00000496202 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
PRPF3-207ENST00000496202 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
PRPF3-207ENST00000496202 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
PRPF3-207ENST00000496202 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
PRPF3-207ENST00000496202 UGGT2Q9NYU1 1516 aa15.78■□□□□ 0.12
PRPF3-207ENST00000496202 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
PRPF3-207ENST00000496202 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
PRPF3-207ENST00000496202 KIAA0556O60303 1618 aa15.72■□□□□ 0.11
PRPF3-207ENST00000496202 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
PRPF3-207ENST00000496202 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
PRPF3-207ENST00000496202 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
PRPF3-207ENST00000496202 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
PRPF3-207ENST00000496202 PTPRGP23470 1445 aa15.68■□□□□ 0.1
PRPF3-207ENST00000496202 EFCAB5A4FU69 1503 aa15.67■□□□□ 0.1
PRPF3-207ENST00000496202 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
PRPF3-207ENST00000496202 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
PRPF3-207ENST00000496202 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
PRPF3-207ENST00000496202 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
PRPF3-207ENST00000496202 CLIP1P30622 1438 aa15.57■□□□□ 0.08
PRPF3-207ENST00000496202 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
PRPF3-207ENST00000496202 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
PRPF3-207ENST00000496202 ADCY10Q96PN6 1610 aa15.57■□□□□ 0.08
PRPF3-207ENST00000496202 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
PRPF3-207ENST00000496202 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
PRPF3-207ENST00000496202 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF3-207ENST00000496202 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
PRPF3-207ENST00000496202 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
PRPF3-207ENST00000496202 ABCA8O94911 1581 aa15.53■□□□□ 0.08
PRPF3-207ENST00000496202 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.08
PRPF3-207ENST00000496202 RAPGEF6Q8TEU7 1601 aa15.51■□□□□ 0.07
PRPF3-207ENST00000496202 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
PRPF3-207ENST00000496202 ZCCHC11Q5TAX3 1644 aaKnown RBP15.46■□□□□ 0.06
PRPF3-207ENST00000496202 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
PRPF3-207ENST00000496202 HECW1Q76N89 1606 aa15.44■□□□□ 0.06
PRPF3-207ENST00000496202 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
PRPF3-207ENST00000496202 ARID3CA6NKF2 412 aa15.43■□□□□ 0.06
PRPF3-207ENST00000496202 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
PRPF3-207ENST00000496202 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
PRPF3-207ENST00000496202 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
PRPF3-207ENST00000496202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
PRPF3-207ENST00000496202 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
PRPF3-207ENST00000496202 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
PRPF3-207ENST00000496202 ASXL2Q76L83 1435 aa15.39■□□□□ 0.05
PRPF3-207ENST00000496202 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
PRPF3-207ENST00000496202 FYCO1Q9BQS8 1478 aa15.39■□□□□ 0.05
PRPF3-207ENST00000496202 ATP10BO94823 1461 aa15.38■□□□□ 0.05
PRPF3-207ENST00000496202 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
PRPF3-207ENST00000496202 WDR7Q9Y4E6 1490 aa15.35■□□□□ 0.05
PRPF3-207ENST00000496202 EPRSP07814 1512 aaKnown RBP15.35■□□□□ 0.05
PRPF3-207ENST00000496202 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PRPF3-207ENST00000496202 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.05
PRPF3-207ENST00000496202 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
PRPF3-207ENST00000496202 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
PRPF3-207ENST00000496202 KIF13AQ9H1H9 1805 aa15.32■□□□□ 0.04
PRPF3-207ENST00000496202 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
PRPF3-207ENST00000496202 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
PRPF3-207ENST00000496202 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
PRPF3-207ENST00000496202 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
PRPF3-207ENST00000496202 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
PRPF3-207ENST00000496202 GLI2P10070 1586 aa15.26■□□□□ 0.03
PRPF3-207ENST00000496202 TSPOAP1O95153 1857 aa15.25■□□□□ 0.03
PRPF3-207ENST00000496202 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
PRPF3-207ENST00000496202 TROQ12816 1431 aaPredicted RBP15.23■□□□□ 0.03
PRPF3-207ENST00000496202 KIF14Q15058 1648 aa15.22■□□□□ 0.03
PRPF3-207ENST00000496202 APLP2Q06481 763 aa15.22■□□□□ 0.03
PRPF3-207ENST00000496202 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.02
PRPF3-207ENST00000496202 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
PRPF3-207ENST00000496202 MAP3K4Q9Y6R4 1608 aa15.21■□□□□ 0.02
PRPF3-207ENST00000496202 TIAM1Q13009 1591 aa15.2■□□□□ 0.02
PRPF3-207ENST00000496202 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
PRPF3-207ENST00000496202 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
PRPF3-207ENST00000496202 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
PRPF3-207ENST00000496202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.025e-7■■□□□ 12.4
PRPF3-207ENST00000496202 TTC37Q6PGP7 1564 aa15.16■□□□□ 0.02
PRPF3-207ENST00000496202 TEX14Q8IWB6 1497 aa15.16■□□□□ 0.02
PRPF3-207ENST00000496202 MAP3K1Q13233 1512 aa15.16■□□□□ 0.02
PRPF3-207ENST00000496202 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
PRPF3-207ENST00000496202 PPRC1Q5VV67 1664 aaKnown RBP15.14■□□□□ 0.01
PRPF3-207ENST00000496202 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
PRPF3-207ENST00000496202 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
PRPF3-207ENST00000496202 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
PRPF3-207ENST00000496202 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
PRPF3-207ENST00000496202 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0
PRPF3-207ENST00000496202 FANCAO15360 1455 aa15.08■□□□□ 0
PRPF3-207ENST00000496202 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
PRPF3-207ENST00000496202 PREX2Q70Z35 1606 aa15.07■□□□□ 0
PRPF3-207ENST00000496202 PLCH2O75038 1416 aa15.07■□□□□ 0
PRPF3-207ENST00000496202 NCOA2Q15596 1464 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms