RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
PRPF3-207ENST00000496202 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
PRPF3-207ENST00000496202 ABCC9O60706 1549 aa19.81■□□□□ 0.76
PRPF3-207ENST00000496202 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
PRPF3-207ENST00000496202 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
PRPF3-207ENST00000496202 NACADO15069 1562 aa19.17■□□□□ 0.66
PRPF3-207ENST00000496202 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
PRPF3-207ENST00000496202 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
PRPF3-207ENST00000496202 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
PRPF3-207ENST00000496202 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
PRPF3-207ENST00000496202 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
PRPF3-207ENST00000496202 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
PRPF3-207ENST00000496202 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
PRPF3-207ENST00000496202 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
PRPF3-207ENST00000496202 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
PRPF3-207ENST00000496202 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
PRPF3-207ENST00000496202 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
PRPF3-207ENST00000496202 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
PRPF3-207ENST00000496202 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
PRPF3-207ENST00000496202 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
PRPF3-207ENST00000496202 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
PRPF3-207ENST00000496202 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
PRPF3-207ENST00000496202 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
PRPF3-207ENST00000496202 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
PRPF3-207ENST00000496202 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
PRPF3-207ENST00000496202 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
PRPF3-207ENST00000496202 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
PRPF3-207ENST00000496202 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
PRPF3-207ENST00000496202 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
PRPF3-207ENST00000496202 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
PRPF3-207ENST00000496202 WIZO95785 1651 aa17.6■□□□□ 0.41
PRPF3-207ENST00000496202 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
PRPF3-207ENST00000496202 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
PRPF3-207ENST00000496202 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
PRPF3-207ENST00000496202 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
PRPF3-207ENST00000496202 NESP48681 1621 aa17.18■□□□□ 0.34
PRPF3-207ENST00000496202 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
PRPF3-207ENST00000496202 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
PRPF3-207ENST00000496202 CFTRP13569 1480 aa17.09■□□□□ 0.33
PRPF3-207ENST00000496202 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
PRPF3-207ENST00000496202 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
PRPF3-207ENST00000496202 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
PRPF3-207ENST00000496202 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
PRPF3-207ENST00000496202 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
PRPF3-207ENST00000496202 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
PRPF3-207ENST00000496202 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
PRPF3-207ENST00000496202 CUX2O14529 1486 aa16.83■□□□□ 0.28
PRPF3-207ENST00000496202 WDR62O43379 1518 aa16.8■□□□□ 0.28
PRPF3-207ENST00000496202 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
PRPF3-207ENST00000496202 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
PRPF3-207ENST00000496202 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
PRPF3-207ENST00000496202 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
PRPF3-207ENST00000496202 CUX1P39880 1505 aa16.66■□□□□ 0.26
PRPF3-207ENST00000496202 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
PRPF3-207ENST00000496202 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
PRPF3-207ENST00000496202 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PRPF3-207ENST00000496202 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
PRPF3-207ENST00000496202 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
PRPF3-207ENST00000496202 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
PRPF3-207ENST00000496202 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
PRPF3-207ENST00000496202 SYNJ1O43426 1573 aa16.58■□□□□ 0.24
PRPF3-207ENST00000496202 SOGA1O94964 1423 aa16.53■□□□□ 0.24
PRPF3-207ENST00000496202 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
PRPF3-207ENST00000496202 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
PRPF3-207ENST00000496202 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
PRPF3-207ENST00000496202 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
PRPF3-207ENST00000496202 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
PRPF3-207ENST00000496202 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
PRPF3-207ENST00000496202 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
PRPF3-207ENST00000496202 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.222e-7■■■■■ 37.6
PRPF3-207ENST00000496202 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
PRPF3-207ENST00000496202 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PRPF3-207ENST00000496202 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
PRPF3-207ENST00000496202 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
PRPF3-207ENST00000496202 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
PRPF3-207ENST00000496202 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
PRPF3-207ENST00000496202 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
PRPF3-207ENST00000496202 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
PRPF3-207ENST00000496202 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
PRPF3-207ENST00000496202 CHD1O14646 1710 aa16.23■□□□□ 0.19
PRPF3-207ENST00000496202 FBLN2P98095 1184 aa16.22■□□□□ 0.19
PRPF3-207ENST00000496202 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
PRPF3-207ENST00000496202 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
PRPF3-207ENST00000496202 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
PRPF3-207ENST00000496202 CUL7Q14999 1698 aa16.18■□□□□ 0.18
PRPF3-207ENST00000496202 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
PRPF3-207ENST00000496202 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.18
PRPF3-207ENST00000496202 IGF1RP08069 1367 aa16.14■□□□□ 0.17
PRPF3-207ENST00000496202 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
PRPF3-207ENST00000496202 EEA1Q15075 1411 aa16.11■□□□□ 0.17
PRPF3-207ENST00000496202 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
PRPF3-207ENST00000496202 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
PRPF3-207ENST00000496202 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
PRPF3-207ENST00000496202 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
PRPF3-207ENST00000496202 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
PRPF3-207ENST00000496202 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
PRPF3-207ENST00000496202 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
PRPF3-207ENST00000496202 NUP160Q12769 1436 aa16.02■□□□□ 0.15
PRPF3-207ENST00000496202 CLASP1Q7Z460 1538 aa16.01■□□□□ 0.15
PRPF3-207ENST00000496202 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms