RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PRG4Q92954 1404 aaPredicted RBP41.58■■■■■ 4.25
HLA-C-209ENST00000495835 TRHP20396 242 aaPredicted RBP41.57■■■■■ 4.25
HLA-C-209ENST00000495835 CARMIL1Q5VZK9 1371 aa41.57■■■■■ 4.25
HLA-C-209ENST00000495835 KIAA0586Q9BVV6 1533 aa41.55■■■■■ 4.24
HLA-C-209ENST00000495835 RAPGEF2Q9Y4G8 1499 aa41.27■■■■■ 4.2
HLA-C-209ENST00000495835 IQGAP2Q13576 1575 aa41.19■■■■■ 4.18
HLA-C-209ENST00000495835 CARMIL2Q6F5E8 1435 aa41.14■■■■■ 4.18
HLA-C-209ENST00000495835 NPM1P06748 294 aaKnown RBP eCLIP41.07■■■■■ 4.17
HLA-C-209ENST00000495835 PTPRGP23470 1445 aa41.03■■■■■ 4.16
HLA-C-209ENST00000495835 TNIKQ9UKE5 1360 aa41.03■■■■■ 4.16
HLA-C-209ENST00000495835 ADCY10Q96PN6 1610 aa41.01■■■■■ 4.16
HLA-C-209ENST00000495835 UGGT2Q9NYU1 1516 aa40.98■■■■■ 4.15
HLA-C-209ENST00000495835 PRXQ9BXM0 1461 aa40.97■■■■■ 4.15
HLA-C-209ENST00000495835 MAPKBP1O60336 1514 aa40.95■■■■■ 4.15
HLA-C-209ENST00000495835 DISP1Q96F81 1524 aa40.93■■■■■ 4.14
HLA-C-209ENST00000495835 CTTNBP2Q8WZ74 1663 aa40.9■■■■■ 4.14
HLA-C-209ENST00000495835 KIF13AQ9H1H9 1805 aa40.88■■■■■ 4.13
HLA-C-209ENST00000495835 ABCC10Q5T3U5 1492 aa40.83■■■■■ 4.13
HLA-C-209ENST00000495835 EEA1Q15075 1411 aa40.8■■■■■ 4.12
HLA-C-209ENST00000495835 CSRNP3Q8WYN3 585 aa40.8■■■■■ 4.12
HLA-C-209ENST00000495835 UHRF1BP1LA0JNW5 1464 aa40.79■■■■■ 4.12
HLA-C-209ENST00000495835 KIAA0556O60303 1618 aa40.78■■■■■ 4.12
HLA-C-209ENST00000495835 ABCC2Q92887 1545 aa40.76■■■■■ 4.12
HLA-C-209ENST00000495835 TTBK1Q5TCY1 1321 aaPredicted RBP40.75■■■■■ 4.11
HLA-C-209ENST00000495835 UACAQ9BZF9 1416 aa40.75■■■■■ 4.11
HLA-C-209ENST00000495835 GOLGA3Q08378 1498 aa40.74■■■■■ 4.11
HLA-C-209ENST00000495835 FAM69CQ0P6D2 419 aa40.72■■■■■ 4.11
HLA-C-209ENST00000495835 DIP2BQ9P265 1576 aa40.69■■■■■ 4.11
HLA-C-209ENST00000495835 PLB1Q6P1J6 1458 aa40.58■■■■■ 4.09
HLA-C-209ENST00000495835 KDM5BQ9UGL1 1544 aa40.57■■■■■ 4.09
HLA-C-209ENST00000495835 ASXL2Q76L83 1435 aa40.52■■■■■ 4.08
HLA-C-209ENST00000495835 CHIC1Q5VXU3 224 aa40.45■■■■■ 4.07
HLA-C-209ENST00000495835 FAM9AQ8IZU1 332 aaPredicted RBP40.44■■■■■ 4.06
HLA-C-209ENST00000495835 GLI2P10070 1586 aa40.44■■■■■ 4.06
HLA-C-209ENST00000495835 ZCCHC11Q5TAX3 1644 aaKnown RBP40.42■■■■■ 4.06
HLA-C-209ENST00000495835 ABCA8O94911 1581 aa40.4■■■■■ 4.06
HLA-C-209ENST00000495835 KIF21BO75037 1637 aa40.36■■■■■ 4.05
HLA-C-209ENST00000495835 SAMD9Q5K651 1589 aa40.34■■■■■ 4.05
HLA-C-209ENST00000495835 TSPOAP1O95153 1857 aa40.33■■■■■ 4.05
HLA-C-209ENST00000495835 EPRSP07814 1512 aaKnown RBP40.3■■■■■ 4.04
HLA-C-209ENST00000495835 WDR7Q9Y4E6 1490 aa40.24■■■■■ 4.03
HLA-C-209ENST00000495835 P3H3Q8IVL6 736 aa40.23■■■■■ 4.03
HLA-C-209ENST00000495835 KDM6BO15054 1643 aa40.21■■■■■ 4.03
HLA-C-209ENST00000495835 MAP3K4Q9Y6R4 1608 aa40.18■■■■■ 4.02
HLA-C-209ENST00000495835 PPRC1Q5VV67 1664 aaKnown RBP40.17■■■■■ 4.02
HLA-C-209ENST00000495835 TEX14Q8IWB6 1497 aa40.08■■■■■ 4.01
HLA-C-209ENST00000495835 EFCAB5A4FU69 1503 aa40.08■■■■■ 4.01
HLA-C-209ENST00000495835 RAPGEF6Q8TEU7 1601 aa40.07■■■■■ 4.01
HLA-C-209ENST00000495835 ATP10BO94823 1461 aa40.07■■■■■ 4
HLA-C-209ENST00000495835 CFAP43Q8NDM7 1665 aa40.01■■■■■ 4
HLA-C-209ENST00000495835 RANGAP1P46060 587 aaPredicted RBP40■■■■□ 3.99
HLA-C-209ENST00000495835 FHOD3Q2V2M9 1422 aa39.99■■■■□ 3.99
HLA-C-209ENST00000495835 UBTFP17480 764 aaKnown RBP39.99■■■■□ 3.99
HLA-C-209ENST00000495835 KCNH8Q96L42 1107 aa39.98■■■■□ 3.99
HLA-C-209ENST00000495835 AEBP2Q6ZN18 517 aaPredicted RBP39.96■■■■□ 3.99
HLA-C-209ENST00000495835 CD109Q6YHK3 1445 aa39.94■■■■□ 3.98
HLA-C-209ENST00000495835 MAGI3Q5TCQ9 1506 aa39.94■■■■□ 3.98
HLA-C-209ENST00000495835 NUP153P49790 1475 aaKnown RBP39.9■■■■□ 3.98
HLA-C-209ENST00000495835 ARID3CA6NKF2 412 aa39.88■■■■□ 3.97
HLA-C-209ENST00000495835 COL17A1Q9UMD9 1497 aaPredicted RBP39.82■■■■□ 3.97
HLA-C-209ENST00000495835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.81■■■■□ 3.96
HLA-C-209ENST00000495835 HNRNPUL2Q1KMD3 747 aaKnown RBP39.81■■■■□ 3.96
HLA-C-209ENST00000495835 ABCA9Q8IUA7 1624 aa39.78■■■■□ 3.96
HLA-C-209ENST00000495835 EHMT2Q96KQ7 1210 aa39.78■■■■□ 3.96
HLA-C-209ENST00000495835 FMN1Q68DA7 1419 aa39.74■■■■□ 3.95
HLA-C-209ENST00000495835 ARHGAP35Q9NRY4 1499 aa39.73■■■■□ 3.95
HLA-C-209ENST00000495835 PLEKHD1A6NEE1 506 aa39.71■■■■□ 3.95
HLA-C-209ENST00000495835 PHLDB1Q86UU1 1377 aa39.69■■■■□ 3.94
HLA-C-209ENST00000495835 ARAP3Q8WWN8 1544 aa39.62■■■■□ 3.93
HLA-C-209ENST00000495835 HECW1Q76N89 1606 aa39.57■■■■□ 3.92
HLA-C-209ENST00000495835 NEO1Q92859 1461 aa39.56■■■■□ 3.92
HLA-C-209ENST00000495835 KDM4FA0A1W2PPD8 638 aa39.54■■■■□ 3.92
HLA-C-209ENST00000495835 CDK13Q14004 1512 aaKnown RBP39.5■■■■□ 3.91
HLA-C-209ENST00000495835 CDK11AQ9UQ88 783 aaPredicted RBP39.46■■■■□ 3.91
HLA-C-209ENST00000495835 ATP1B4Q9UN42 357 aaPredicted RBP39.45■■■■□ 3.91
HLA-C-209ENST00000495835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.45■■■■□ 3.91
HLA-C-209ENST00000495835 CFAP74Q9C0B2 1584 aa39.37■■■■□ 3.89
HLA-C-209ENST00000495835 ADGRL1O94910 1474 aa39.36■■■■□ 3.89
HLA-C-209ENST00000495835 TTC37Q6PGP7 1564 aa39.34■■■■□ 3.89
HLA-C-209ENST00000495835 CASKIN1Q8WXD9 1431 aa39.33■■■■□ 3.89
HLA-C-209ENST00000495835 FANCAO15360 1455 aa39.31■■■■□ 3.88
HLA-C-209ENST00000495835 CLIP1P30622 1438 aa39.3■■■■□ 3.88
HLA-C-209ENST00000495835 AKNAQ7Z591 1439 aa39.29■■■■□ 3.88
HLA-C-209ENST00000495835 RAPGEF3O95398 923 aa39.28■■■■□ 3.88
HLA-C-209ENST00000495835 CCDC18Q5T9S5 1454 aa39.27■■■■□ 3.88
HLA-C-209ENST00000495835 LRRIQ1Q96JM4 1722 aa39.26■■■■□ 3.88
HLA-C-209ENST00000495835 PLCH2O75038 1416 aa39.26■■■■□ 3.88
HLA-C-209ENST00000495835 TROQ12816 1431 aaPredicted RBP39.26■■■■□ 3.88
HLA-C-209ENST00000495835 DENND4BO75064 1496 aaPredicted RBP39.24■■■■□ 3.87
HLA-C-209ENST00000495835 PCF11O94913 1555 aaKnown RBP39.22■■■■□ 3.87
HLA-C-209ENST00000495835 FRMPD1Q5SYB0 1578 aa39.21■■■■□ 3.87
HLA-C-209ENST00000495835 KIF14Q15058 1648 aa39.21■■■■□ 3.87
HLA-C-209ENST00000495835 FYCO1Q9BQS8 1478 aa39.2■■■■□ 3.87
HLA-C-209ENST00000495835 RICTORQ6R327 1708 aa39.17■■■■□ 3.86
HLA-C-209ENST00000495835 MYO5CQ9NQX4 1742 aa39.17■■■■□ 3.86
HLA-C-209ENST00000495835 EFCAB2Q5VUJ9 269 aa39.13■■■■□ 3.85
HLA-C-209ENST00000495835 ZMYM4Q5VZL5 1548 aa39.06■■■■□ 3.84
HLA-C-209ENST00000495835 SCAPERQ9BY12 1400 aa39.04■■■■□ 3.84
HLA-C-209ENST00000495835 MAGI2Q86UL8 1455 aa39.04■■■■□ 3.84
HLA-C-209ENST00000495835 ARHGEF40Q8TER5 1519 aa39.01■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms