RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
PSMB4-207ENST00000495805 KIAA0586Q9BVV6 1533 aa22.58■■□□□ 1.21
PSMB4-207ENST00000495805 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
PSMB4-207ENST00000495805 EEA1Q15075 1411 aa22.56■■□□□ 1.2
PSMB4-207ENST00000495805 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
PSMB4-207ENST00000495805 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
PSMB4-207ENST00000495805 PRXQ9BXM0 1461 aa22.48■■□□□ 1.19
PSMB4-207ENST00000495805 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
PSMB4-207ENST00000495805 IQGAP2Q13576 1575 aa22.44■■□□□ 1.18
PSMB4-207ENST00000495805 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
PSMB4-207ENST00000495805 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
PSMB4-207ENST00000495805 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.17
PSMB4-207ENST00000495805 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
PSMB4-207ENST00000495805 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
PSMB4-207ENST00000495805 PTPRGP23470 1445 aa22.28■■□□□ 1.16
PSMB4-207ENST00000495805 KIF21BO75037 1637 aa22.26■■□□□ 1.15
PSMB4-207ENST00000495805 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
PSMB4-207ENST00000495805 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
PSMB4-207ENST00000495805 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
PSMB4-207ENST00000495805 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
PSMB4-207ENST00000495805 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
PSMB4-207ENST00000495805 KIAA0556O60303 1618 aa22.2■■□□□ 1.14
PSMB4-207ENST00000495805 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
PSMB4-207ENST00000495805 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
PSMB4-207ENST00000495805 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
PSMB4-207ENST00000495805 UACAQ9BZF9 1416 aa22.11■■□□□ 1.13
PSMB4-207ENST00000495805 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
PSMB4-207ENST00000495805 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.13
PSMB4-207ENST00000495805 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
PSMB4-207ENST00000495805 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
PSMB4-207ENST00000495805 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
PSMB4-207ENST00000495805 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
PSMB4-207ENST00000495805 EFCAB5A4FU69 1503 aa22■■□□□ 1.11
PSMB4-207ENST00000495805 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
PSMB4-207ENST00000495805 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
PSMB4-207ENST00000495805 ABCA8O94911 1581 aa21.96■■□□□ 1.11
PSMB4-207ENST00000495805 ABCC10Q5T3U5 1492 aa21.94■■□□□ 1.1
PSMB4-207ENST00000495805 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
PSMB4-207ENST00000495805 FHOD3Q2V2M9 1422 aa21.93■■□□□ 1.1
PSMB4-207ENST00000495805 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
PSMB4-207ENST00000495805 ZCCHC11Q5TAX3 1644 aaKnown RBP21.9■■□□□ 1.1
PSMB4-207ENST00000495805 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
PSMB4-207ENST00000495805 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
PSMB4-207ENST00000495805 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
PSMB4-207ENST00000495805 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
PSMB4-207ENST00000495805 FMN1Q68DA7 1419 aa21.83■■□□□ 1.09
PSMB4-207ENST00000495805 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
PSMB4-207ENST00000495805 ATP10BO94823 1461 aa21.8■■□□□ 1.08
PSMB4-207ENST00000495805 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
PSMB4-207ENST00000495805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
PSMB4-207ENST00000495805 HNRNPUL2Q1KMD3 747 aaKnown RBP21.8■■□□□ 1.08
PSMB4-207ENST00000495805 GLI2P10070 1586 aa21.78■■□□□ 1.08
PSMB4-207ENST00000495805 EPRSP07814 1512 aaKnown RBP21.77■■□□□ 1.08
PSMB4-207ENST00000495805 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.07
PSMB4-207ENST00000495805 CLIP1P30622 1438 aa21.76■■□□□ 1.07
PSMB4-207ENST00000495805 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
PSMB4-207ENST00000495805 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
PSMB4-207ENST00000495805 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
PSMB4-207ENST00000495805 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
PSMB4-207ENST00000495805 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
PSMB4-207ENST00000495805 TSPOAP1O95153 1857 aa21.66■■□□□ 1.06
PSMB4-207ENST00000495805 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
PSMB4-207ENST00000495805 MAP3K4Q9Y6R4 1608 aa21.65■■□□□ 1.06
PSMB4-207ENST00000495805 CEP162Q5TB80 1403 aa21.64■■□□□ 1.06
PSMB4-207ENST00000495805 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
PSMB4-207ENST00000495805 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
PSMB4-207ENST00000495805 CASKIN1Q8WXD9 1431 aa21.63■■□□□ 1.05
PSMB4-207ENST00000495805 CFAP43Q8NDM7 1665 aa21.61■■□□□ 1.05
PSMB4-207ENST00000495805 CDK13Q14004 1512 aaKnown RBP21.6■■□□□ 1.05
PSMB4-207ENST00000495805 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.04
PSMB4-207ENST00000495805 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
PSMB4-207ENST00000495805 MAGI3Q5TCQ9 1506 aa21.56■■□□□ 1.04
PSMB4-207ENST00000495805 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
PSMB4-207ENST00000495805 PPRC1Q5VV67 1664 aaKnown RBP21.56■■□□□ 1.04
PSMB4-207ENST00000495805 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
PSMB4-207ENST00000495805 KDM6BO15054 1643 aa21.55■■□□□ 1.04
PSMB4-207ENST00000495805 TROQ12816 1431 aaPredicted RBP21.48■■□□□ 1.03
PSMB4-207ENST00000495805 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
PSMB4-207ENST00000495805 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
PSMB4-207ENST00000495805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.45■■□□□ 1.022e-13■■■□□ 17.2
PSMB4-207ENST00000495805 KIF14Q15058 1648 aa21.43■■□□□ 1.02
PSMB4-207ENST00000495805 NEO1Q92859 1461 aa21.42■■□□□ 1.02
PSMB4-207ENST00000495805 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
PSMB4-207ENST00000495805 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.02
PSMB4-207ENST00000495805 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.01
PSMB4-207ENST00000495805 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.01
PSMB4-207ENST00000495805 PLCH2O75038 1416 aa21.38■■□□□ 1.01
PSMB4-207ENST00000495805 CFAP74Q9C0B2 1584 aa21.37■■□□□ 1.01
PSMB4-207ENST00000495805 FANCAO15360 1455 aa21.37■■□□□ 1.01
PSMB4-207ENST00000495805 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
PSMB4-207ENST00000495805 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
PSMB4-207ENST00000495805 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
PSMB4-207ENST00000495805 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
PSMB4-207ENST00000495805 RAPGEF3O95398 923 aa21.28■■□□□ 1
PSMB4-207ENST00000495805 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
PSMB4-207ENST00000495805 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
PSMB4-207ENST00000495805 APLP2Q06481 763 aa21.27■■□□□ 1
PSMB4-207ENST00000495805 EHBP1L1Q8N3D4 1523 aa21.26■□□□□ 0.99
PSMB4-207ENST00000495805 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
PSMB4-207ENST00000495805 TIAM1Q13009 1591 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms