RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
PSMB4-207ENST00000495805 CCDC180Q9P1Z9 1646 aa28.97■■■□□ 2.23
PSMB4-207ENST00000495805 ABCC9O60706 1549 aa28.33■■■□□ 2.13
PSMB4-207ENST00000495805 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
PSMB4-207ENST00000495805 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
PSMB4-207ENST00000495805 NACADO15069 1562 aa27.26■■□□□ 1.96
PSMB4-207ENST00000495805 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
PSMB4-207ENST00000495805 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
PSMB4-207ENST00000495805 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
PSMB4-207ENST00000495805 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
PSMB4-207ENST00000495805 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
PSMB4-207ENST00000495805 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
PSMB4-207ENST00000495805 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
PSMB4-207ENST00000495805 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
PSMB4-207ENST00000495805 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
PSMB4-207ENST00000495805 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
PSMB4-207ENST00000495805 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
PSMB4-207ENST00000495805 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
PSMB4-207ENST00000495805 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
PSMB4-207ENST00000495805 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
PSMB4-207ENST00000495805 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
PSMB4-207ENST00000495805 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
PSMB4-207ENST00000495805 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
PSMB4-207ENST00000495805 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
PSMB4-207ENST00000495805 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
PSMB4-207ENST00000495805 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
PSMB4-207ENST00000495805 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PSMB4-207ENST00000495805 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
PSMB4-207ENST00000495805 WIZO95785 1651 aa24.81■■□□□ 1.56
PSMB4-207ENST00000495805 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
PSMB4-207ENST00000495805 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
PSMB4-207ENST00000495805 NESP48681 1621 aa24.49■■□□□ 1.51
PSMB4-207ENST00000495805 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
PSMB4-207ENST00000495805 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
PSMB4-207ENST00000495805 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
PSMB4-207ENST00000495805 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
PSMB4-207ENST00000495805 CFTRP13569 1480 aa24.27■■□□□ 1.48
PSMB4-207ENST00000495805 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
PSMB4-207ENST00000495805 CUX2O14529 1486 aa24.2■■□□□ 1.47
PSMB4-207ENST00000495805 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
PSMB4-207ENST00000495805 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
PSMB4-207ENST00000495805 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
PSMB4-207ENST00000495805 THOC2Q8NI27 1593 aaKnown RBP24.11■■□□□ 1.45
PSMB4-207ENST00000495805 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
PSMB4-207ENST00000495805 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
PSMB4-207ENST00000495805 WDR62O43379 1518 aa23.97■■□□□ 1.43
PSMB4-207ENST00000495805 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
PSMB4-207ENST00000495805 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
PSMB4-207ENST00000495805 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
PSMB4-207ENST00000495805 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
PSMB4-207ENST00000495805 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
PSMB4-207ENST00000495805 CUX1P39880 1505 aa23.54■■□□□ 1.36
PSMB4-207ENST00000495805 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
PSMB4-207ENST00000495805 SOGA1O94964 1423 aa23.49■■□□□ 1.35
PSMB4-207ENST00000495805 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
PSMB4-207ENST00000495805 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
PSMB4-207ENST00000495805 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
PSMB4-207ENST00000495805 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
PSMB4-207ENST00000495805 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
PSMB4-207ENST00000495805 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
PSMB4-207ENST00000495805 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
PSMB4-207ENST00000495805 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
PSMB4-207ENST00000495805 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.335e-8■■■■■ 79.9
PSMB4-207ENST00000495805 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
PSMB4-207ENST00000495805 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
PSMB4-207ENST00000495805 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
PSMB4-207ENST00000495805 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
PSMB4-207ENST00000495805 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
PSMB4-207ENST00000495805 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
PSMB4-207ENST00000495805 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
PSMB4-207ENST00000495805 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
PSMB4-207ENST00000495805 FBLN2P98095 1184 aa23.15■■□□□ 1.3
PSMB4-207ENST00000495805 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
PSMB4-207ENST00000495805 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
PSMB4-207ENST00000495805 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
PSMB4-207ENST00000495805 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
PSMB4-207ENST00000495805 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
PSMB4-207ENST00000495805 CHD1O14646 1710 aa23.05■■□□□ 1.28
PSMB4-207ENST00000495805 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
PSMB4-207ENST00000495805 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
PSMB4-207ENST00000495805 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
PSMB4-207ENST00000495805 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
PSMB4-207ENST00000495805 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
PSMB4-207ENST00000495805 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
PSMB4-207ENST00000495805 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
PSMB4-207ENST00000495805 IGF1RP08069 1367 aa22.86■■□□□ 1.25
PSMB4-207ENST00000495805 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
PSMB4-207ENST00000495805 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
PSMB4-207ENST00000495805 CUL7Q14999 1698 aa22.79■■□□□ 1.24
PSMB4-207ENST00000495805 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
PSMB4-207ENST00000495805 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
PSMB4-207ENST00000495805 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
PSMB4-207ENST00000495805 NUP160Q12769 1436 aa22.76■■□□□ 1.23
PSMB4-207ENST00000495805 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
PSMB4-207ENST00000495805 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
PSMB4-207ENST00000495805 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
PSMB4-207ENST00000495805 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
PSMB4-207ENST00000495805 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PSMB4-207ENST00000495805 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
PSMB4-207ENST00000495805 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms