RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 EEA1Q15075 1411 aa35.05■■■■□ 3.2
SMIM29-208ENST00000495581 JPH4Q96JJ6 628 aa35.04■■■■□ 3.2
SMIM29-208ENST00000495581 ARAP1Q96P48 1450 aa35.03■■■■□ 3.2
SMIM29-208ENST00000495581 SHROOM2Q13796 1616 aa35.03■■■■□ 3.2
SMIM29-208ENST00000495581 CSRNP3Q8WYN3 585 aa35■■■■□ 3.19
SMIM29-208ENST00000495581 PRXQ9BXM0 1461 aa34.95■■■■□ 3.19
SMIM29-208ENST00000495581 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
SMIM29-208ENST00000495581 ERCC6L2Q5T890 1561 aa34.89■■■■□ 3.18
SMIM29-208ENST00000495581 FAM9AQ8IZU1 332 aaPredicted RBP34.86■■■■□ 3.17
SMIM29-208ENST00000495581 IQGAP2Q13576 1575 aa34.83■■■■□ 3.17
SMIM29-208ENST00000495581 CARMIL2Q6F5E8 1435 aa34.72■■■■□ 3.15
SMIM29-208ENST00000495581 CTTNBP2Q8WZ74 1663 aa34.67■■■■□ 3.14
SMIM29-208ENST00000495581 UGGT2Q9NYU1 1516 aa34.65■■■■□ 3.14
SMIM29-208ENST00000495581 KIF21BO75037 1637 aa34.59■■■■□ 3.13
SMIM29-208ENST00000495581 TNIKQ9UKE5 1360 aa34.58■■■■□ 3.13
SMIM29-208ENST00000495581 DISP1Q96F81 1524 aa34.56■■■■□ 3.12
SMIM29-208ENST00000495581 PTPRGP23470 1445 aa34.55■■■■□ 3.12
SMIM29-208ENST00000495581 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
SMIM29-208ENST00000495581 TTBK1Q5TCY1 1321 aaPredicted RBP34.47■■■■□ 3.11
SMIM29-208ENST00000495581 KIAA0556O60303 1618 aa34.47■■■■□ 3.11
SMIM29-208ENST00000495581 NPM1P06748 294 aaKnown RBP eCLIP34.41■■■■□ 3.1
SMIM29-208ENST00000495581 UBTFP17480 764 aaKnown RBP34.41■■■■□ 3.1
SMIM29-208ENST00000495581 EHMT2Q96KQ7 1210 aa34.38■■■■□ 3.09
SMIM29-208ENST00000495581 TRHP20396 242 aaPredicted RBP34.36■■■■□ 3.09
SMIM29-208ENST00000495581 ADCY10Q96PN6 1610 aa34.33■■■■□ 3.09
SMIM29-208ENST00000495581 UACAQ9BZF9 1416 aa34.31■■■■□ 3.08
SMIM29-208ENST00000495581 RANGAP1P46060 587 aaPredicted RBP34.28■■■■□ 3.08
SMIM29-208ENST00000495581 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
SMIM29-208ENST00000495581 P3H3Q8IVL6 736 aa34.26■■■■□ 3.08
SMIM29-208ENST00000495581 SAMD9Q5K651 1589 aa34.25■■■■□ 3.07
SMIM29-208ENST00000495581 ABCC2Q92887 1545 aa34.21■■■■□ 3.07
SMIM29-208ENST00000495581 EFCAB5A4FU69 1503 aa34.17■■■■□ 3.06
SMIM29-208ENST00000495581 MAPKBP1O60336 1514 aa34.15■■■■□ 3.06
SMIM29-208ENST00000495581 PLB1Q6P1J6 1458 aa34.14■■■■□ 3.06
SMIM29-208ENST00000495581 ABCA8O94911 1581 aa34.1■■■■□ 3.05
SMIM29-208ENST00000495581 FHOD3Q2V2M9 1422 aa34.08■■■■□ 3.05
SMIM29-208ENST00000495581 KDM5BQ9UGL1 1544 aa34.08■■■■□ 3.05
SMIM29-208ENST00000495581 ABCC10Q5T3U5 1492 aa34.01■■■■□ 3.03
SMIM29-208ENST00000495581 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
SMIM29-208ENST00000495581 FAM69CQ0P6D2 419 aa33.98■■■■□ 3.03
SMIM29-208ENST00000495581 ZCCHC11Q5TAX3 1644 aaKnown RBP33.97■■■■□ 3.03
SMIM29-208ENST00000495581 ARHGAP35Q9NRY4 1499 aa33.96■■■■□ 3.03
SMIM29-208ENST00000495581 RAPGEF6Q8TEU7 1601 aa33.93■■■■□ 3.02
SMIM29-208ENST00000495581 DIP2BQ9P265 1576 aa33.9■■■■□ 3.02
SMIM29-208ENST00000495581 KIF13AQ9H1H9 1805 aa33.9■■■■□ 3.02
SMIM29-208ENST00000495581 FMN1Q68DA7 1419 aa33.88■■■■□ 3.01
SMIM29-208ENST00000495581 ARID3CA6NKF2 412 aa33.85■■■■□ 3.01
SMIM29-208ENST00000495581 ATP10BO94823 1461 aa33.84■■■■□ 3.01
SMIM29-208ENST00000495581 CLIP1P30622 1438 aa33.83■■■■□ 3.01
SMIM29-208ENST00000495581 WDR7Q9Y4E6 1490 aa33.82■■■■□ 3.01
SMIM29-208ENST00000495581 NUP153P49790 1475 aaKnown RBP33.82■■■■□ 3
SMIM29-208ENST00000495581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.8■■■■□ 3
SMIM29-208ENST00000495581 HNRNPUL2Q1KMD3 747 aaKnown RBP33.8■■■■□ 3
SMIM29-208ENST00000495581 EPRSP07814 1512 aaKnown RBP33.78■■■■□ 3
SMIM29-208ENST00000495581 GLI2P10070 1586 aa33.77■■■■□ 3
SMIM29-208ENST00000495581 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
SMIM29-208ENST00000495581 KCNH8Q96L42 1107 aa33.71■■■□□ 2.99
SMIM29-208ENST00000495581 ATP1B4Q9UN42 357 aaPredicted RBP33.71■■■□□ 2.99
SMIM29-208ENST00000495581 CEP162Q5TB80 1403 aa33.66■■■□□ 2.98
SMIM29-208ENST00000495581 HECW1Q76N89 1606 aa33.66■■■□□ 2.98
SMIM29-208ENST00000495581 PLEKHD1A6NEE1 506 aa33.65■■■□□ 2.98
SMIM29-208ENST00000495581 CASKIN1Q8WXD9 1431 aa33.6■■■□□ 2.97
SMIM29-208ENST00000495581 TSPOAP1O95153 1857 aa33.59■■■□□ 2.97
SMIM29-208ENST00000495581 MAP3K4Q9Y6R4 1608 aa33.57■■■□□ 2.97
SMIM29-208ENST00000495581 CDK11AQ9UQ88 783 aaPredicted RBP33.56■■■□□ 2.96
SMIM29-208ENST00000495581 CDK13Q14004 1512 aaKnown RBP33.55■■■□□ 2.96
SMIM29-208ENST00000495581 CD109Q6YHK3 1445 aa33.53■■■□□ 2.96
SMIM29-208ENST00000495581 CFAP43Q8NDM7 1665 aa33.52■■■□□ 2.96
SMIM29-208ENST00000495581 PCF11O94913 1555 aaKnown RBP33.51■■■□□ 2.96
SMIM29-208ENST00000495581 TEX14Q8IWB6 1497 aa33.51■■■□□ 2.96
SMIM29-208ENST00000495581 FYCO1Q9BQS8 1478 aa33.5■■■□□ 2.95
SMIM29-208ENST00000495581 CCDC18Q5T9S5 1454 aa33.47■■■□□ 2.95
SMIM29-208ENST00000495581 PPRC1Q5VV67 1664 aaKnown RBP33.46■■■□□ 2.95
SMIM29-208ENST00000495581 MAGI3Q5TCQ9 1506 aa33.44■■■□□ 2.94
SMIM29-208ENST00000495581 ABCA9Q8IUA7 1624 aa33.44■■■□□ 2.94
SMIM29-208ENST00000495581 KDM6BO15054 1643 aa33.38■■■□□ 2.93
SMIM29-208ENST00000495581 LRRIQ1Q96JM4 1722 aa33.37■■■□□ 2.93
SMIM29-208ENST00000495581 TROQ12816 1431 aaPredicted RBP33.36■■■□□ 2.93
SMIM29-208ENST00000495581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.31■■■□□ 2.92
SMIM29-208ENST00000495581 PHLDB1Q86UU1 1377 aa33.28■■■□□ 2.92
SMIM29-208ENST00000495581 VPS8Q8N3P4 1428 aa33.27■■■□□ 2.92
SMIM29-208ENST00000495581 KIF14Q15058 1648 aa33.25■■■□□ 2.91
SMIM29-208ENST00000495581 TTC37Q6PGP7 1564 aa33.23■■■□□ 2.91
SMIM29-208ENST00000495581 NEO1Q92859 1461 aa33.22■■■□□ 2.91
SMIM29-208ENST00000495581 COL17A1Q9UMD9 1497 aaPredicted RBP33.2■■■□□ 2.91
SMIM29-208ENST00000495581 PLCH2O75038 1416 aa33.17■■■□□ 2.9
SMIM29-208ENST00000495581 MTUS2Q5JR59 1369 aa33.16■■■□□ 2.9
SMIM29-208ENST00000495581 ARAP3Q8WWN8 1544 aa33.16■■■□□ 2.9
SMIM29-208ENST00000495581 FANCAO15360 1455 aa33.14■■■□□ 2.9
SMIM29-208ENST00000495581 CFAP74Q9C0B2 1584 aa33.13■■■□□ 2.89
SMIM29-208ENST00000495581 EFCAB2Q5VUJ9 269 aa33.1■■■□□ 2.89
SMIM29-208ENST00000495581 MYO5CQ9NQX4 1742 aa33.1■■■□□ 2.89
SMIM29-208ENST00000495581 AKNAQ7Z591 1439 aa33.09■■■□□ 2.89
SMIM29-208ENST00000495581 EHBP1L1Q8N3D4 1523 aa33.03■■■□□ 2.88
SMIM29-208ENST00000495581 TIAM1Q13009 1591 aa33.02■■■□□ 2.88
SMIM29-208ENST00000495581 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
SMIM29-208ENST00000495581 APLP2Q06481 763 aa33■■■□□ 2.87
SMIM29-208ENST00000495581 DENND4BO75064 1496 aaPredicted RBP32.99■■■□□ 2.87
SMIM29-208ENST00000495581 MAP3K1Q13233 1512 aa32.99■■■□□ 2.87
SMIM29-208ENST00000495581 RAPGEF3O95398 923 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms