RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 KIAA0586Q9BVV6 1533 aa15.47■□□□□ 0.07
ACTN4-207ENST00000495553 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.07
ACTN4-207ENST00000495553 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
ACTN4-207ENST00000495553 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
ACTN4-207ENST00000495553 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
ACTN4-207ENST00000495553 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
ACTN4-207ENST00000495553 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
ACTN4-207ENST00000495553 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
ACTN4-207ENST00000495553 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
ACTN4-207ENST00000495553 KIF21BO75037 1637 aa15.35■□□□□ 0.05
ACTN4-207ENST00000495553 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
ACTN4-207ENST00000495553 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
ACTN4-207ENST00000495553 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
ACTN4-207ENST00000495553 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
ACTN4-207ENST00000495553 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
ACTN4-207ENST00000495553 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-207ENST00000495553 PTPRGP23470 1445 aa15.28■□□□□ 0.04
ACTN4-207ENST00000495553 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
ACTN4-207ENST00000495553 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
ACTN4-207ENST00000495553 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-207ENST00000495553 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
ACTN4-207ENST00000495553 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
ACTN4-207ENST00000495553 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
ACTN4-207ENST00000495553 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
ACTN4-207ENST00000495553 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
ACTN4-207ENST00000495553 KIAA0556O60303 1618 aa15.18■□□□□ 0.02
ACTN4-207ENST00000495553 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-207ENST00000495553 UACAQ9BZF9 1416 aa15.15■□□□□ 0.02
ACTN4-207ENST00000495553 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
ACTN4-207ENST00000495553 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
ACTN4-207ENST00000495553 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
ACTN4-207ENST00000495553 SAMD9Q5K651 1589 aa15.09■□□□□ 0.01
ACTN4-207ENST00000495553 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
ACTN4-207ENST00000495553 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
ACTN4-207ENST00000495553 PLB1Q6P1J6 1458 aa15.08■□□□□ 0.01
ACTN4-207ENST00000495553 CLIP1P30622 1438 aa15.08■□□□□ 0
ACTN4-207ENST00000495553 ABCC2Q92887 1545 aa15.07■□□□□ 0
ACTN4-207ENST00000495553 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
ACTN4-207ENST00000495553 ARID3CA6NKF2 412 aa15.04■□□□□ -0
ACTN4-207ENST00000495553 ABCA8O94911 1581 aa15.02□□□□□ -0.01
ACTN4-207ENST00000495553 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
ACTN4-207ENST00000495553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-207ENST00000495553 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
ACTN4-207ENST00000495553 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
ACTN4-207ENST00000495553 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-207ENST00000495553 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
ACTN4-207ENST00000495553 FMN1Q68DA7 1419 aa15□□□□□ -0.01
ACTN4-207ENST00000495553 ASXL2Q76L83 1435 aa15□□□□□ -0.01
ACTN4-207ENST00000495553 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
ACTN4-207ENST00000495553 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
ACTN4-207ENST00000495553 ATP10BO94823 1461 aa14.95□□□□□ -0.02
ACTN4-207ENST00000495553 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
ACTN4-207ENST00000495553 NUP153P49790 1475 aaKnown RBP14.94□□□□□ -0.02
ACTN4-207ENST00000495553 ZCCHC11Q5TAX3 1644 aaKnown RBP14.93□□□□□ -0.02
ACTN4-207ENST00000495553 WDR7Q9Y4E6 1490 aa14.92□□□□□ -0.02
ACTN4-207ENST00000495553 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
ACTN4-207ENST00000495553 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-207ENST00000495553 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
ACTN4-207ENST00000495553 EPRSP07814 1512 aaKnown RBP14.88□□□□□ -0.03
ACTN4-207ENST00000495553 APLP2Q06481 763 aa14.88□□□□□ -0.03
ACTN4-207ENST00000495553 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
ACTN4-207ENST00000495553 DIP2BQ9P265 1576 aa14.88□□□□□ -0.03
ACTN4-207ENST00000495553 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
ACTN4-207ENST00000495553 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
ACTN4-207ENST00000495553 GLI2P10070 1586 aa14.83□□□□□ -0.04
ACTN4-207ENST00000495553 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
ACTN4-207ENST00000495553 CD109Q6YHK3 1445 aa14.81□□□□□ -0.04
ACTN4-207ENST00000495553 CCDC18Q5T9S5 1454 aa14.81□□□□□ -0.04
ACTN4-207ENST00000495553 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
ACTN4-207ENST00000495553 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
ACTN4-207ENST00000495553 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
ACTN4-207ENST00000495553 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-207ENST00000495553 MAP3K4Q9Y6R4 1608 aa14.73□□□□□ -0.05
ACTN4-207ENST00000495553 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
ACTN4-207ENST00000495553 MAGI3Q5TCQ9 1506 aa14.72□□□□□ -0.05
ACTN4-207ENST00000495553 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
ACTN4-207ENST00000495553 MAP3K1Q13233 1512 aa14.71□□□□□ -0.06
ACTN4-207ENST00000495553 ABCA9Q8IUA7 1624 aa14.7□□□□□ -0.06
ACTN4-207ENST00000495553 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
ACTN4-207ENST00000495553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.69□□□□□ -0.065e-6■■■■□ 19.7
ACTN4-207ENST00000495553 PHLDB1Q86UU1 1377 aa14.68□□□□□ -0.06
ACTN4-207ENST00000495553 KIF14Q15058 1648 aa14.67□□□□□ -0.06
ACTN4-207ENST00000495553 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
ACTN4-207ENST00000495553 EFCAB2Q5VUJ9 269 aa14.66□□□□□ -0.06
ACTN4-207ENST00000495553 PLCH2O75038 1416 aa14.66□□□□□ -0.06
ACTN4-207ENST00000495553 PPRC1Q5VV67 1664 aaKnown RBP14.65□□□□□ -0.06
ACTN4-207ENST00000495553 LRRIQ1Q96JM4 1722 aa14.65□□□□□ -0.06
ACTN4-207ENST00000495553 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
ACTN4-207ENST00000495553 NEO1Q92859 1461 aa14.64□□□□□ -0.07
ACTN4-207ENST00000495553 KDM6BO15054 1643 aa14.64□□□□□ -0.07
ACTN4-207ENST00000495553 FANCAO15360 1455 aa14.63□□□□□ -0.07
ACTN4-207ENST00000495553 COL17A1Q9UMD9 1497 aaPredicted RBP14.62□□□□□ -0.07
ACTN4-207ENST00000495553 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
ACTN4-207ENST00000495553 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
ACTN4-207ENST00000495553 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
ACTN4-207ENST00000495553 RAPGEF3O95398 923 aa14.6□□□□□ -0.07
ACTN4-207ENST00000495553 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
ACTN4-207ENST00000495553 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
ACTN4-207ENST00000495553 CFDP1Q9UEE9 299 aaPredicted RBP14.59□□□□□ -0.07
ACTN4-207ENST00000495553 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms