RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 KIAA0586Q9BVV6 1533 aa22.85■■□□□ 1.25
RBM28-208ENST00000495327 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
RBM28-208ENST00000495327 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
RBM28-208ENST00000495327 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
RBM28-208ENST00000495327 IQGAP2Q13576 1575 aa22.74■■□□□ 1.23
RBM28-208ENST00000495327 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
RBM28-208ENST00000495327 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
RBM28-208ENST00000495327 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
RBM28-208ENST00000495327 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
RBM28-208ENST00000495327 CARMIL2Q6F5E8 1435 aa22.58■■□□□ 1.21
RBM28-208ENST00000495327 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
RBM28-208ENST00000495327 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
RBM28-208ENST00000495327 EEA1Q15075 1411 aa22.56■■□□□ 1.2
RBM28-208ENST00000495327 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
RBM28-208ENST00000495327 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
RBM28-208ENST00000495327 KIF13AQ9H1H9 1805 aa22.51■■□□□ 1.19
RBM28-208ENST00000495327 MAPKBP1O60336 1514 aa22.51■■□□□ 1.19
RBM28-208ENST00000495327 PTPRGP23470 1445 aa22.48■■□□□ 1.19
RBM28-208ENST00000495327 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
RBM28-208ENST00000495327 UHRF1BP1LA0JNW5 1464 aa22.42■■□□□ 1.18
RBM28-208ENST00000495327 GOLGA3Q08378 1498 aa22.42■■□□□ 1.18
RBM28-208ENST00000495327 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
RBM28-208ENST00000495327 KIF21BO75037 1637 aa22.4■■□□□ 1.18
RBM28-208ENST00000495327 DIP2BQ9P265 1576 aa22.39■■□□□ 1.18
RBM28-208ENST00000495327 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
RBM28-208ENST00000495327 ABCC10Q5T3U5 1492 aa22.37■■□□□ 1.17
RBM28-208ENST00000495327 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
RBM28-208ENST00000495327 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
RBM28-208ENST00000495327 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
RBM28-208ENST00000495327 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
RBM28-208ENST00000495327 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
RBM28-208ENST00000495327 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
RBM28-208ENST00000495327 ABCA8O94911 1581 aa22.29■■□□□ 1.16
RBM28-208ENST00000495327 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
RBM28-208ENST00000495327 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
RBM28-208ENST00000495327 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
RBM28-208ENST00000495327 GLI2P10070 1586 aa22.22■■□□□ 1.15
RBM28-208ENST00000495327 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
RBM28-208ENST00000495327 TSPOAP1O95153 1857 aa22.18■■□□□ 1.14
RBM28-208ENST00000495327 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
RBM28-208ENST00000495327 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.14
RBM28-208ENST00000495327 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.14
RBM28-208ENST00000495327 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
RBM28-208ENST00000495327 EPRSP07814 1512 aaKnown RBP22.13■■□□□ 1.13
RBM28-208ENST00000495327 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
RBM28-208ENST00000495327 P3H3Q8IVL6 736 aa22.08■■□□□ 1.13
RBM28-208ENST00000495327 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
RBM28-208ENST00000495327 KDM6BO15054 1643 aa22.07■■□□□ 1.12
RBM28-208ENST00000495327 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
RBM28-208ENST00000495327 ATP10BO94823 1461 aa22.03■■□□□ 1.12
RBM28-208ENST00000495327 NUP153P49790 1475 aaKnown RBP22.01■■□□□ 1.11
RBM28-208ENST00000495327 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
RBM28-208ENST00000495327 TEX14Q8IWB6 1497 aa21.98■■□□□ 1.11
RBM28-208ENST00000495327 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
RBM28-208ENST00000495327 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
RBM28-208ENST00000495327 ABCA9Q8IUA7 1624 aa21.94■■□□□ 1.1
RBM28-208ENST00000495327 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
RBM28-208ENST00000495327 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
RBM28-208ENST00000495327 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
RBM28-208ENST00000495327 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
RBM28-208ENST00000495327 CD109Q6YHK3 1445 aa21.89■■□□□ 1.09
RBM28-208ENST00000495327 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
RBM28-208ENST00000495327 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
RBM28-208ENST00000495327 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.08
RBM28-208ENST00000495327 CDK13Q14004 1512 aaKnown RBP21.82■■□□□ 1.08
RBM28-208ENST00000495327 LRRIQ1Q96JM4 1722 aa21.81■■□□□ 1.08
RBM28-208ENST00000495327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
RBM28-208ENST00000495327 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
RBM28-208ENST00000495327 PCF11O94913 1555 aaKnown RBP21.78■■□□□ 1.08
RBM28-208ENST00000495327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
RBM28-208ENST00000495327 ARAP3Q8WWN8 1544 aa21.75■■□□□ 1.07
RBM28-208ENST00000495327 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
RBM28-208ENST00000495327 CLIP1P30622 1438 aa21.73■■□□□ 1.07
RBM28-208ENST00000495327 NEO1Q92859 1461 aa21.73■■□□□ 1.07
RBM28-208ENST00000495327 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
RBM28-208ENST00000495327 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
RBM28-208ENST00000495327 PHLDB1Q86UU1 1377 aa21.72■■□□□ 1.07
RBM28-208ENST00000495327 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
RBM28-208ENST00000495327 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
RBM28-208ENST00000495327 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
RBM28-208ENST00000495327 KIF14Q15058 1648 aa21.68■■□□□ 1.06
RBM28-208ENST00000495327 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
RBM28-208ENST00000495327 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.05
RBM28-208ENST00000495327 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
RBM28-208ENST00000495327 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
RBM28-208ENST00000495327 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
RBM28-208ENST00000495327 RICTORQ6R327 1708 aa21.62■■□□□ 1.05
RBM28-208ENST00000495327 FANCAO15360 1455 aa21.62■■□□□ 1.05
RBM28-208ENST00000495327 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
RBM28-208ENST00000495327 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
RBM28-208ENST00000495327 PLCH2O75038 1416 aa21.57■■□□□ 1.04
RBM28-208ENST00000495327 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
RBM28-208ENST00000495327 ADGRL1O94910 1474 aa21.55■■□□□ 1.04
RBM28-208ENST00000495327 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
RBM28-208ENST00000495327 DENND4BO75064 1496 aaPredicted RBP21.53■■□□□ 1.04
RBM28-208ENST00000495327 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
RBM28-208ENST00000495327 ZMYM4Q5VZL5 1548 aa21.53■■□□□ 1.04
RBM28-208ENST00000495327 KDM4FA0A1W2PPD8 638 aa21.52■■□□□ 1.04
RBM28-208ENST00000495327 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
RBM28-208ENST00000495327 CDC42BPAQ5VT25 1732 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms