RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
GTF2B-207ENST00000494819 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
GTF2B-207ENST00000494819 ABCC10Q5T3U5 1492 aa18.27■□□□□ 0.52
GTF2B-207ENST00000494819 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
GTF2B-207ENST00000494819 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
GTF2B-207ENST00000494819 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
GTF2B-207ENST00000494819 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
GTF2B-207ENST00000494819 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
GTF2B-207ENST00000494819 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
GTF2B-207ENST00000494819 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
GTF2B-207ENST00000494819 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
GTF2B-207ENST00000494819 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
GTF2B-207ENST00000494819 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
GTF2B-207ENST00000494819 KDM6BO15054 1643 aa18.17■□□□□ 0.5
GTF2B-207ENST00000494819 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
GTF2B-207ENST00000494819 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
GTF2B-207ENST00000494819 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
GTF2B-207ENST00000494819 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
GTF2B-207ENST00000494819 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
GTF2B-207ENST00000494819 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
GTF2B-207ENST00000494819 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
GTF2B-207ENST00000494819 PPRC1Q5VV67 1664 aaKnown RBP17.96■□□□□ 0.47
GTF2B-207ENST00000494819 PTPRGP23470 1445 aa17.94■□□□□ 0.46
GTF2B-207ENST00000494819 IGF1RP08069 1367 aa17.93■□□□□ 0.46
GTF2B-207ENST00000494819 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
GTF2B-207ENST00000494819 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
GTF2B-207ENST00000494819 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
GTF2B-207ENST00000494819 GLI2P10070 1586 aa17.91■□□□□ 0.46
GTF2B-207ENST00000494819 CUL7Q14999 1698 aa17.9■□□□□ 0.46
GTF2B-207ENST00000494819 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
GTF2B-207ENST00000494819 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
GTF2B-207ENST00000494819 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
GTF2B-207ENST00000494819 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
GTF2B-207ENST00000494819 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
GTF2B-207ENST00000494819 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.45
GTF2B-207ENST00000494819 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
GTF2B-207ENST00000494819 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
GTF2B-207ENST00000494819 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
GTF2B-207ENST00000494819 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
GTF2B-207ENST00000494819 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
GTF2B-207ENST00000494819 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
GTF2B-207ENST00000494819 DISP1Q96F81 1524 aa17.77■□□□□ 0.44
GTF2B-207ENST00000494819 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.43
GTF2B-207ENST00000494819 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
GTF2B-207ENST00000494819 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
GTF2B-207ENST00000494819 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
GTF2B-207ENST00000494819 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
GTF2B-207ENST00000494819 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
GTF2B-207ENST00000494819 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
GTF2B-207ENST00000494819 KIF21BO75037 1637 aa17.59■□□□□ 0.41
GTF2B-207ENST00000494819 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.41
GTF2B-207ENST00000494819 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
GTF2B-207ENST00000494819 CFAP43Q8NDM7 1665 aa17.57■□□□□ 0.4
GTF2B-207ENST00000494819 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
GTF2B-207ENST00000494819 ABCA8O94911 1581 aa17.53■□□□□ 0.4
GTF2B-207ENST00000494819 KCNH8Q96L42 1107 aa17.51■□□□□ 0.39
GTF2B-207ENST00000494819 PTPRMP28827 1452 aa17.48■□□□□ 0.39
GTF2B-207ENST00000494819 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
GTF2B-207ENST00000494819 ADAMTSL3P82987 1691 aa17.45■□□□□ 0.38
GTF2B-207ENST00000494819 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
GTF2B-207ENST00000494819 MSH5O43196 834 aa17.45■□□□□ 0.38
GTF2B-207ENST00000494819 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
GTF2B-207ENST00000494819 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
GTF2B-207ENST00000494819 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
GTF2B-207ENST00000494819 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
GTF2B-207ENST00000494819 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
GTF2B-207ENST00000494819 ATP10BO94823 1461 aa17.37■□□□□ 0.37
GTF2B-207ENST00000494819 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
GTF2B-207ENST00000494819 ABCA9Q8IUA7 1624 aa17.37■□□□□ 0.37
GTF2B-207ENST00000494819 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
GTF2B-207ENST00000494819 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
GTF2B-207ENST00000494819 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.36
GTF2B-207ENST00000494819 NEO1Q92859 1461 aa17.32■□□□□ 0.36
GTF2B-207ENST00000494819 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
GTF2B-207ENST00000494819 ARID4BQ4LE39 1312 aaPredicted RBP17.28■□□□□ 0.36
GTF2B-207ENST00000494819 ARHGEF40Q8TER5 1519 aa17.28■□□□□ 0.36
GTF2B-207ENST00000494819 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
GTF2B-207ENST00000494819 RIMS1Q86UR5 1692 aaKnown RBP17.28■□□□□ 0.36
GTF2B-207ENST00000494819 HSPA2P54652 639 aa17.26■□□□□ 0.35
GTF2B-207ENST00000494819 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
GTF2B-207ENST00000494819 SAMD9Q5K651 1589 aa17.22■□□□□ 0.35
GTF2B-207ENST00000494819 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
GTF2B-207ENST00000494819 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
GTF2B-207ENST00000494819 RICTORQ6R327 1708 aa17.2■□□□□ 0.34
GTF2B-207ENST00000494819 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
GTF2B-207ENST00000494819 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
GTF2B-207ENST00000494819 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
GTF2B-207ENST00000494819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
GTF2B-207ENST00000494819 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
GTF2B-207ENST00000494819 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
GTF2B-207ENST00000494819 AKNAQ7Z591 1439 aa17.16■□□□□ 0.34
GTF2B-207ENST00000494819 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
GTF2B-207ENST00000494819 FANCAO15360 1455 aa17.16■□□□□ 0.34
GTF2B-207ENST00000494819 ZMYM4Q5VZL5 1548 aa17.16■□□□□ 0.34
GTF2B-207ENST00000494819 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
GTF2B-207ENST00000494819 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
GTF2B-207ENST00000494819 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
GTF2B-207ENST00000494819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
GTF2B-207ENST00000494819 ILDR2Q71H61 639 aa17.12■□□□□ 0.33
GTF2B-207ENST00000494819 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms