RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
GTF2B-207ENST00000494819 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
GTF2B-207ENST00000494819 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
GTF2B-207ENST00000494819 ABCC9O60706 1549 aa23.78■■□□□ 1.4
GTF2B-207ENST00000494819 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
GTF2B-207ENST00000494819 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
GTF2B-207ENST00000494819 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
GTF2B-207ENST00000494819 NACADO15069 1562 aa22.12■■□□□ 1.13
GTF2B-207ENST00000494819 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
GTF2B-207ENST00000494819 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.09
GTF2B-207ENST00000494819 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
GTF2B-207ENST00000494819 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
GTF2B-207ENST00000494819 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
GTF2B-207ENST00000494819 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
GTF2B-207ENST00000494819 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
GTF2B-207ENST00000494819 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
GTF2B-207ENST00000494819 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
GTF2B-207ENST00000494819 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
GTF2B-207ENST00000494819 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
GTF2B-207ENST00000494819 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
GTF2B-207ENST00000494819 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
GTF2B-207ENST00000494819 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
GTF2B-207ENST00000494819 CUX2O14529 1486 aa20.65■□□□□ 0.9
GTF2B-207ENST00000494819 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
GTF2B-207ENST00000494819 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
GTF2B-207ENST00000494819 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
GTF2B-207ENST00000494819 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
GTF2B-207ENST00000494819 NESP48681 1621 aa20.32■□□□□ 0.84
GTF2B-207ENST00000494819 HMGXB3Q12766 1538 aa20.27■□□□□ 0.83
GTF2B-207ENST00000494819 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
GTF2B-207ENST00000494819 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
GTF2B-207ENST00000494819 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
GTF2B-207ENST00000494819 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
GTF2B-207ENST00000494819 LAMC3Q9Y6N6 1575 aa20.05■□□□□ 0.8
GTF2B-207ENST00000494819 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
GTF2B-207ENST00000494819 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
GTF2B-207ENST00000494819 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
GTF2B-207ENST00000494819 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
GTF2B-207ENST00000494819 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
GTF2B-207ENST00000494819 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
GTF2B-207ENST00000494819 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.76
GTF2B-207ENST00000494819 WDR62O43379 1518 aa19.81■□□□□ 0.76
GTF2B-207ENST00000494819 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
GTF2B-207ENST00000494819 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
GTF2B-207ENST00000494819 WIZO95785 1651 aa19.6■□□□□ 0.73
GTF2B-207ENST00000494819 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
GTF2B-207ENST00000494819 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
GTF2B-207ENST00000494819 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
GTF2B-207ENST00000494819 CFTRP13569 1480 aa19.5■□□□□ 0.71
GTF2B-207ENST00000494819 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
GTF2B-207ENST00000494819 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
GTF2B-207ENST00000494819 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
GTF2B-207ENST00000494819 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
GTF2B-207ENST00000494819 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
GTF2B-207ENST00000494819 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
GTF2B-207ENST00000494819 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
GTF2B-207ENST00000494819 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
GTF2B-207ENST00000494819 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
GTF2B-207ENST00000494819 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
GTF2B-207ENST00000494819 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
GTF2B-207ENST00000494819 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
GTF2B-207ENST00000494819 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
GTF2B-207ENST00000494819 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
GTF2B-207ENST00000494819 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
GTF2B-207ENST00000494819 CHD1O14646 1710 aa19.09■□□□□ 0.65
GTF2B-207ENST00000494819 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
GTF2B-207ENST00000494819 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
GTF2B-207ENST00000494819 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
GTF2B-207ENST00000494819 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
GTF2B-207ENST00000494819 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
GTF2B-207ENST00000494819 FBLN2P98095 1184 aa18.98■□□□□ 0.63
GTF2B-207ENST00000494819 FOXD1Q16676 465 aa18.97■□□□□ 0.63
GTF2B-207ENST00000494819 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
GTF2B-207ENST00000494819 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
GTF2B-207ENST00000494819 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
GTF2B-207ENST00000494819 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
GTF2B-207ENST00000494819 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
GTF2B-207ENST00000494819 SOGA1O94964 1423 aa18.83■□□□□ 0.61
GTF2B-207ENST00000494819 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
GTF2B-207ENST00000494819 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
GTF2B-207ENST00000494819 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
GTF2B-207ENST00000494819 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
GTF2B-207ENST00000494819 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
GTF2B-207ENST00000494819 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
GTF2B-207ENST00000494819 SYNJ2O15056 1496 aa18.72■□□□□ 0.59
GTF2B-207ENST00000494819 CUX1P39880 1505 aa18.71■□□□□ 0.59
GTF2B-207ENST00000494819 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
GTF2B-207ENST00000494819 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
GTF2B-207ENST00000494819 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
GTF2B-207ENST00000494819 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
GTF2B-207ENST00000494819 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
GTF2B-207ENST00000494819 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
GTF2B-207ENST00000494819 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
GTF2B-207ENST00000494819 NUP160Q12769 1436 aa18.48■□□□□ 0.55
GTF2B-207ENST00000494819 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
GTF2B-207ENST00000494819 ADRA2BP18089 450 aa18.45■□□□□ 0.54
GTF2B-207ENST00000494819 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
GTF2B-207ENST00000494819 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
GTF2B-207ENST00000494819 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
GTF2B-207ENST00000494819 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms