RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
APTX-230ENST00000494649 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
APTX-230ENST00000494649 EEA1Q15075 1411 aa18.45■□□□□ 0.54
APTX-230ENST00000494649 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
APTX-230ENST00000494649 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
APTX-230ENST00000494649 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
APTX-230ENST00000494649 KIAA0586Q9BVV6 1533 aa18.39■□□□□ 0.53
APTX-230ENST00000494649 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
APTX-230ENST00000494649 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
APTX-230ENST00000494649 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
APTX-230ENST00000494649 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
APTX-230ENST00000494649 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
APTX-230ENST00000494649 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
APTX-230ENST00000494649 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
APTX-230ENST00000494649 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
APTX-230ENST00000494649 KIF21BO75037 1637 aa18.29■□□□□ 0.52
APTX-230ENST00000494649 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
APTX-230ENST00000494649 P3H3Q8IVL6 736 aa18.24■□□□□ 0.51
APTX-230ENST00000494649 DISP1Q96F81 1524 aa18.22■□□□□ 0.51
APTX-230ENST00000494649 CARMIL2Q6F5E8 1435 aa18.2■□□□□ 0.5
APTX-230ENST00000494649 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
APTX-230ENST00000494649 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
APTX-230ENST00000494649 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
APTX-230ENST00000494649 PTPRGP23470 1445 aa18.15■□□□□ 0.5
APTX-230ENST00000494649 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
APTX-230ENST00000494649 FHOD3Q2V2M9 1422 aa18.08■□□□□ 0.49
APTX-230ENST00000494649 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
APTX-230ENST00000494649 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
APTX-230ENST00000494649 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
APTX-230ENST00000494649 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
APTX-230ENST00000494649 UACAQ9BZF9 1416 aa18.02■□□□□ 0.47
APTX-230ENST00000494649 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
APTX-230ENST00000494649 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
APTX-230ENST00000494649 TRHP20396 242 aaPredicted RBP18■□□□□ 0.47
APTX-230ENST00000494649 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
APTX-230ENST00000494649 ABCC2Q92887 1545 aa17.96■□□□□ 0.47
APTX-230ENST00000494649 CLIP1P30622 1438 aa17.96■□□□□ 0.46
APTX-230ENST00000494649 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
APTX-230ENST00000494649 ABCA8O94911 1581 aa17.94■□□□□ 0.46
APTX-230ENST00000494649 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
APTX-230ENST00000494649 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
APTX-230ENST00000494649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
APTX-230ENST00000494649 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
APTX-230ENST00000494649 RAPGEF6Q8TEU7 1601 aa17.89■□□□□ 0.45
APTX-230ENST00000494649 ZCCHC11Q5TAX3 1644 aaKnown RBP17.88■□□□□ 0.45
APTX-230ENST00000494649 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
APTX-230ENST00000494649 NUP153P49790 1475 aaKnown RBP17.85■□□□□ 0.45
APTX-230ENST00000494649 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
APTX-230ENST00000494649 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
APTX-230ENST00000494649 MAPKBP1O60336 1514 aa17.84■□□□□ 0.45
APTX-230ENST00000494649 ATP10BO94823 1461 aa17.83■□□□□ 0.44
APTX-230ENST00000494649 FAM69CQ0P6D2 419 aa17.83■□□□□ 0.44
APTX-230ENST00000494649 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
APTX-230ENST00000494649 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
APTX-230ENST00000494649 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
APTX-230ENST00000494649 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
APTX-230ENST00000494649 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
APTX-230ENST00000494649 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
APTX-230ENST00000494649 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
APTX-230ENST00000494649 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
APTX-230ENST00000494649 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
APTX-230ENST00000494649 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
APTX-230ENST00000494649 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
APTX-230ENST00000494649 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
APTX-230ENST00000494649 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
APTX-230ENST00000494649 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
APTX-230ENST00000494649 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
APTX-230ENST00000494649 CCDC18Q5T9S5 1454 aa17.62■□□□□ 0.41
APTX-230ENST00000494649 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
APTX-230ENST00000494649 GLI2P10070 1586 aa17.62■□□□□ 0.41
APTX-230ENST00000494649 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
APTX-230ENST00000494649 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
APTX-230ENST00000494649 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
APTX-230ENST00000494649 KIF14Q15058 1648 aa17.58■□□□□ 0.41
APTX-230ENST00000494649 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
APTX-230ENST00000494649 PPRC1Q5VV67 1664 aaKnown RBP17.57■□□□□ 0.4
APTX-230ENST00000494649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
APTX-230ENST00000494649 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
APTX-230ENST00000494649 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
APTX-230ENST00000494649 ABCA9Q8IUA7 1624 aa17.55■□□□□ 0.4
APTX-230ENST00000494649 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
APTX-230ENST00000494649 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
APTX-230ENST00000494649 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
APTX-230ENST00000494649 APLP2Q06481 763 aa17.5■□□□□ 0.39
APTX-230ENST00000494649 TEX14Q8IWB6 1497 aa17.49■□□□□ 0.39
APTX-230ENST00000494649 KDM6BO15054 1643 aa17.47■□□□□ 0.39
APTX-230ENST00000494649 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
APTX-230ENST00000494649 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
APTX-230ENST00000494649 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
APTX-230ENST00000494649 FANCAO15360 1455 aa17.44■□□□□ 0.38
APTX-230ENST00000494649 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
APTX-230ENST00000494649 PLCH2O75038 1416 aa17.43■□□□□ 0.38
APTX-230ENST00000494649 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
APTX-230ENST00000494649 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
APTX-230ENST00000494649 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
APTX-230ENST00000494649 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
APTX-230ENST00000494649 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
APTX-230ENST00000494649 NCOA2Q15596 1464 aa17.39■□□□□ 0.38
APTX-230ENST00000494649 AKNAQ7Z591 1439 aa17.39■□□□□ 0.37
APTX-230ENST00000494649 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms