RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 KIAA0586Q9BVV6 1533 aa39.35■■■■□ 3.89
CLIC3-203ENST00000494426 ERCC6L2Q5T890 1561 aa39.34■■■■□ 3.89
CLIC3-203ENST00000494426 PRXQ9BXM0 1461 aa39.32■■■■□ 3.89
CLIC3-203ENST00000494426 CYB5RLQ6IPT4 315 aa39.32■■■■□ 3.89
CLIC3-203ENST00000494426 JPH4Q96JJ6 628 aa39.32■■■■□ 3.89
CLIC3-203ENST00000494426 CSRNP3Q8WYN3 585 aa39.29■■■■□ 3.88
CLIC3-203ENST00000494426 EEA1Q15075 1411 aa39.29■■■■□ 3.88
CLIC3-203ENST00000494426 PRG4Q92954 1404 aaPredicted RBP39.23■■■■□ 3.87
CLIC3-203ENST00000494426 FAM9AQ8IZU1 332 aaPredicted RBP39.18■■■■□ 3.86
CLIC3-203ENST00000494426 IQGAP2Q13576 1575 aa39.12■■■■□ 3.85
CLIC3-203ENST00000494426 CTTNBP2Q8WZ74 1663 aa39.05■■■■□ 3.84
CLIC3-203ENST00000494426 UGGT2Q9NYU1 1516 aa38.94■■■■□ 3.82
CLIC3-203ENST00000494426 KIF21BO75037 1637 aa38.92■■■■□ 3.82
CLIC3-203ENST00000494426 DISP1Q96F81 1524 aa38.9■■■■□ 3.82
CLIC3-203ENST00000494426 CARMIL2Q6F5E8 1435 aa38.88■■■■□ 3.81
CLIC3-203ENST00000494426 TNIKQ9UKE5 1360 aa38.79■■■■□ 3.8
CLIC3-203ENST00000494426 KIAA0556O60303 1618 aa38.78■■■■□ 3.8
CLIC3-203ENST00000494426 PTPRGP23470 1445 aa38.75■■■■□ 3.79
CLIC3-203ENST00000494426 TTBK1Q5TCY1 1321 aaPredicted RBP38.68■■■■□ 3.78
CLIC3-203ENST00000494426 GOLGA3Q08378 1498 aa38.68■■■■□ 3.78
CLIC3-203ENST00000494426 EHMT2Q96KQ7 1210 aa38.67■■■■□ 3.78
CLIC3-203ENST00000494426 ADCY10Q96PN6 1610 aa38.65■■■■□ 3.78
CLIC3-203ENST00000494426 SAMD9Q5K651 1589 aa38.57■■■■□ 3.76
CLIC3-203ENST00000494426 UBTFP17480 764 aaKnown RBP38.56■■■■□ 3.76
CLIC3-203ENST00000494426 P3H3Q8IVL6 736 aa38.51■■■■□ 3.76
CLIC3-203ENST00000494426 UACAQ9BZF9 1416 aa38.51■■■■□ 3.76
CLIC3-203ENST00000494426 RANGAP1P46060 587 aaPredicted RBP38.49■■■■□ 3.75
CLIC3-203ENST00000494426 UHRF1BP1LA0JNW5 1464 aa38.47■■■■□ 3.75
CLIC3-203ENST00000494426 TRHP20396 242 aaPredicted RBP38.45■■■■□ 3.75
CLIC3-203ENST00000494426 ABCC2Q92887 1545 aa38.43■■■■□ 3.74
CLIC3-203ENST00000494426 NPM1P06748 294 aaKnown RBP eCLIP38.43■■■■□ 3.74
CLIC3-203ENST00000494426 PLB1Q6P1J6 1458 aa38.4■■■■□ 3.74
CLIC3-203ENST00000494426 ABCA8O94911 1581 aa38.38■■■■□ 3.73
CLIC3-203ENST00000494426 MAPKBP1O60336 1514 aa38.36■■■■□ 3.73
CLIC3-203ENST00000494426 EFCAB5A4FU69 1503 aa38.35■■■■□ 3.73
CLIC3-203ENST00000494426 FHOD3Q2V2M9 1422 aa38.32■■■■□ 3.73
CLIC3-203ENST00000494426 KDM5BQ9UGL1 1544 aa38.3■■■■□ 3.72
CLIC3-203ENST00000494426 ZCCHC11Q5TAX3 1644 aaKnown RBP38.23■■■■□ 3.71
CLIC3-203ENST00000494426 ARHGAP35Q9NRY4 1499 aa38.23■■■■□ 3.71
CLIC3-203ENST00000494426 KIF13AQ9H1H9 1805 aa38.22■■■■□ 3.71
CLIC3-203ENST00000494426 ABCC10Q5T3U5 1492 aa38.18■■■■□ 3.7
CLIC3-203ENST00000494426 RAPGEF6Q8TEU7 1601 aa38.16■■■■□ 3.7
CLIC3-203ENST00000494426 ASXL2Q76L83 1435 aa38.16■■■■□ 3.7
CLIC3-203ENST00000494426 DIP2BQ9P265 1576 aa38.13■■■■□ 3.69
CLIC3-203ENST00000494426 FAM69CQ0P6D2 419 aa38.08■■■■□ 3.69
CLIC3-203ENST00000494426 ATP10BO94823 1461 aa38.06■■■■□ 3.68
CLIC3-203ENST00000494426 LOC105371045A0A1W2PR82 267 aa38.04■■■■□ 3.68
CLIC3-203ENST00000494426 NUP153P49790 1475 aaKnown RBP38.03■■■■□ 3.68
CLIC3-203ENST00000494426 ARID3CA6NKF2 412 aa38.03■■■■□ 3.68
CLIC3-203ENST00000494426 CLIP1P30622 1438 aa37.98■■■■□ 3.67
CLIC3-203ENST00000494426 FMN1Q68DA7 1419 aa37.98■■■■□ 3.67
CLIC3-203ENST00000494426 WDR7Q9Y4E6 1490 aa37.96■■■■□ 3.67
CLIC3-203ENST00000494426 EPRSP07814 1512 aaKnown RBP37.95■■■■□ 3.67
CLIC3-203ENST00000494426 GLI2P10070 1586 aa37.94■■■■□ 3.66
CLIC3-203ENST00000494426 CEP162Q5TB80 1403 aa37.84■■■■□ 3.65
CLIC3-203ENST00000494426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.83■■■■□ 3.65
CLIC3-203ENST00000494426 HNRNPUL2Q1KMD3 747 aaKnown RBP37.83■■■■□ 3.65
CLIC3-203ENST00000494426 TSPOAP1O95153 1857 aa37.83■■■■□ 3.65
CLIC3-203ENST00000494426 HECW1Q76N89 1606 aa37.81■■■■□ 3.64
CLIC3-203ENST00000494426 KCNH8Q96L42 1107 aa37.81■■■■□ 3.64
CLIC3-203ENST00000494426 MAP3K4Q9Y6R4 1608 aa37.78■■■■□ 3.64
CLIC3-203ENST00000494426 CDK13Q14004 1512 aaKnown RBP37.77■■■■□ 3.64
CLIC3-203ENST00000494426 ATP1B4Q9UN42 357 aaPredicted RBP37.77■■■■□ 3.64
CLIC3-203ENST00000494426 PPRC1Q5VV67 1664 aaKnown RBP37.76■■■■□ 3.63
CLIC3-203ENST00000494426 PCF11O94913 1555 aaKnown RBP37.75■■■■□ 3.63
CLIC3-203ENST00000494426 LRRIQ1Q96JM4 1722 aa37.74■■■■□ 3.63
CLIC3-203ENST00000494426 CASKIN1Q8WXD9 1431 aa37.73■■■■□ 3.63
CLIC3-203ENST00000494426 PLEKHD1A6NEE1 506 aa37.68■■■■□ 3.62
CLIC3-203ENST00000494426 CFAP43Q8NDM7 1665 aa37.66■■■■□ 3.62
CLIC3-203ENST00000494426 FYCO1Q9BQS8 1478 aa37.63■■■■□ 3.61
CLIC3-203ENST00000494426 CD109Q6YHK3 1445 aa37.61■■■■□ 3.61
CLIC3-203ENST00000494426 ABCA9Q8IUA7 1624 aa37.61■■■■□ 3.61
CLIC3-203ENST00000494426 MAGI3Q5TCQ9 1506 aa37.55■■■■□ 3.6
CLIC3-203ENST00000494426 CCDC18Q5T9S5 1454 aa37.54■■■■□ 3.6
CLIC3-203ENST00000494426 TEX14Q8IWB6 1497 aa37.52■■■■□ 3.6
CLIC3-203ENST00000494426 CDK11AQ9UQ88 783 aaPredicted RBP37.5■■■■□ 3.59
CLIC3-203ENST00000494426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.48■■■■□ 3.59
CLIC3-203ENST00000494426 KDM6BO15054 1643 aa37.47■■■■□ 3.59
CLIC3-203ENST00000494426 TROQ12816 1431 aaPredicted RBP37.45■■■■□ 3.59
CLIC3-203ENST00000494426 TTC37Q6PGP7 1564 aa37.42■■■■□ 3.58
CLIC3-203ENST00000494426 KIF14Q15058 1648 aa37.39■■■■□ 3.58
CLIC3-203ENST00000494426 COL17A1Q9UMD9 1497 aaPredicted RBP37.39■■■■□ 3.58
CLIC3-203ENST00000494426 VPS8Q8N3P4 1428 aa37.38■■■■□ 3.57
CLIC3-203ENST00000494426 NEO1Q92859 1461 aa37.26■■■■□ 3.55
CLIC3-203ENST00000494426 PLCH2O75038 1416 aa37.24■■■■□ 3.55
CLIC3-203ENST00000494426 AEBP2Q6ZN18 517 aaPredicted RBP37.23■■■■□ 3.55
CLIC3-203ENST00000494426 MYO5CQ9NQX4 1742 aa37.22■■■■□ 3.55
CLIC3-203ENST00000494426 ARAP3Q8WWN8 1544 aa37.22■■■■□ 3.55
CLIC3-203ENST00000494426 PHLDB1Q86UU1 1377 aa37.22■■■■□ 3.55
CLIC3-203ENST00000494426 FANCAO15360 1455 aa37.2■■■■□ 3.54
CLIC3-203ENST00000494426 TIAM1Q13009 1591 aa37.16■■■■□ 3.54
CLIC3-203ENST00000494426 MTUS2Q5JR59 1369 aa37.16■■■■□ 3.54
CLIC3-203ENST00000494426 AKNAQ7Z591 1439 aa37.15■■■■□ 3.54
CLIC3-203ENST00000494426 CFAP74Q9C0B2 1584 aa37.15■■■■□ 3.54
CLIC3-203ENST00000494426 CDC42BPBQ9Y5S2 1711 aa37.11■■■■□ 3.53
CLIC3-203ENST00000494426 EHBP1L1Q8N3D4 1523 aa37.1■■■■□ 3.53
CLIC3-203ENST00000494426 CDC42BPAQ5VT25 1732 aa37.08■■■■□ 3.53
CLIC3-203ENST00000494426 PREX2Q70Z35 1606 aa37.07■■■■□ 3.53
CLIC3-203ENST00000494426 EFCAB2Q5VUJ9 269 aa37.07■■■■□ 3.52
CLIC3-203ENST00000494426 MAP3K1Q13233 1512 aa37.06■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms