RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
ATG4B-224ENST00000494132 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
ATG4B-224ENST00000494132 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
ATG4B-224ENST00000494132 RAPGEF2Q9Y4G8 1499 aa24.9■■□□□ 1.58
ATG4B-224ENST00000494132 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
ATG4B-224ENST00000494132 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
ATG4B-224ENST00000494132 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
ATG4B-224ENST00000494132 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
ATG4B-224ENST00000494132 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
ATG4B-224ENST00000494132 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
ATG4B-224ENST00000494132 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
ATG4B-224ENST00000494132 ADCY10Q96PN6 1610 aa24.7■■□□□ 1.54
ATG4B-224ENST00000494132 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
ATG4B-224ENST00000494132 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
ATG4B-224ENST00000494132 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
ATG4B-224ENST00000494132 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
ATG4B-224ENST00000494132 KIAA0556O60303 1618 aa24.65■■□□□ 1.54
ATG4B-224ENST00000494132 PTPRGP23470 1445 aa24.63■■□□□ 1.53
ATG4B-224ENST00000494132 EEA1Q15075 1411 aa24.63■■□□□ 1.53
ATG4B-224ENST00000494132 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
ATG4B-224ENST00000494132 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
ATG4B-224ENST00000494132 NPM1P06748 294 aaKnown RBP eCLIP24.53■■□□□ 1.52
ATG4B-224ENST00000494132 KIF21BO75037 1637 aa24.51■■□□□ 1.51
ATG4B-224ENST00000494132 MAPKBP1O60336 1514 aa24.5■■□□□ 1.51
ATG4B-224ENST00000494132 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
ATG4B-224ENST00000494132 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
ATG4B-224ENST00000494132 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
ATG4B-224ENST00000494132 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
ATG4B-224ENST00000494132 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
ATG4B-224ENST00000494132 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
ATG4B-224ENST00000494132 P3H3Q8IVL6 736 aa24.43■■□□□ 1.5
ATG4B-224ENST00000494132 UHRF1BP1LA0JNW5 1464 aa24.43■■□□□ 1.5
ATG4B-224ENST00000494132 PLB1Q6P1J6 1458 aa24.41■■□□□ 1.5
ATG4B-224ENST00000494132 SAMD9Q5K651 1589 aa24.41■■□□□ 1.5
ATG4B-224ENST00000494132 ABCC10Q5T3U5 1492 aa24.4■■□□□ 1.5
ATG4B-224ENST00000494132 ZCCHC11Q5TAX3 1644 aaKnown RBP24.4■■□□□ 1.5
ATG4B-224ENST00000494132 TSPOAP1O95153 1857 aa24.38■■□□□ 1.49
ATG4B-224ENST00000494132 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
ATG4B-224ENST00000494132 ABCA8O94911 1581 aa24.36■■□□□ 1.49
ATG4B-224ENST00000494132 KDM5BQ9UGL1 1544 aa24.35■■□□□ 1.49
ATG4B-224ENST00000494132 ASXL2Q76L83 1435 aa24.34■■□□□ 1.49
ATG4B-224ENST00000494132 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
ATG4B-224ENST00000494132 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
ATG4B-224ENST00000494132 ARID3CA6NKF2 412 aa24.26■■□□□ 1.47
ATG4B-224ENST00000494132 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
ATG4B-224ENST00000494132 EFCAB5A4FU69 1503 aa24.21■■□□□ 1.47
ATG4B-224ENST00000494132 PPRC1Q5VV67 1664 aaKnown RBP24.19■■□□□ 1.46
ATG4B-224ENST00000494132 GLI2P10070 1586 aa24.19■■□□□ 1.46
ATG4B-224ENST00000494132 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
ATG4B-224ENST00000494132 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
ATG4B-224ENST00000494132 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
ATG4B-224ENST00000494132 ATP10BO94823 1461 aa24.13■■□□□ 1.45
ATG4B-224ENST00000494132 KDM6BO15054 1643 aa24.11■■□□□ 1.45
ATG4B-224ENST00000494132 ARHGAP35Q9NRY4 1499 aa24.11■■□□□ 1.45
ATG4B-224ENST00000494132 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
ATG4B-224ENST00000494132 NUP153P49790 1475 aaKnown RBP24.1■■□□□ 1.45
ATG4B-224ENST00000494132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
ATG4B-224ENST00000494132 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
ATG4B-224ENST00000494132 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
ATG4B-224ENST00000494132 CDK13Q14004 1512 aaKnown RBP23.99■■□□□ 1.43
ATG4B-224ENST00000494132 FMN1Q68DA7 1419 aa23.96■■□□□ 1.43
ATG4B-224ENST00000494132 CD109Q6YHK3 1445 aa23.96■■□□□ 1.43
ATG4B-224ENST00000494132 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
ATG4B-224ENST00000494132 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
ATG4B-224ENST00000494132 HECW1Q76N89 1606 aa23.95■■□□□ 1.43
ATG4B-224ENST00000494132 TEX14Q8IWB6 1497 aa23.95■■□□□ 1.42
ATG4B-224ENST00000494132 ABCA9Q8IUA7 1624 aa23.94■■□□□ 1.42
ATG4B-224ENST00000494132 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
ATG4B-224ENST00000494132 MAGI3Q5TCQ9 1506 aa23.9■■□□□ 1.42
ATG4B-224ENST00000494132 CLIP1P30622 1438 aa23.89■■□□□ 1.41
ATG4B-224ENST00000494132 PCF11O94913 1555 aaKnown RBP23.89■■□□□ 1.41
ATG4B-224ENST00000494132 PLEKHD1A6NEE1 506 aa23.86■■□□□ 1.41
ATG4B-224ENST00000494132 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
ATG4B-224ENST00000494132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.81■■□□□ 1.4
ATG4B-224ENST00000494132 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
ATG4B-224ENST00000494132 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
ATG4B-224ENST00000494132 KIF14Q15058 1648 aa23.77■■□□□ 1.4
ATG4B-224ENST00000494132 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
ATG4B-224ENST00000494132 FYCO1Q9BQS8 1478 aa23.72■■□□□ 1.39
ATG4B-224ENST00000494132 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
ATG4B-224ENST00000494132 CCDC18Q5T9S5 1454 aa23.7■■□□□ 1.38
ATG4B-224ENST00000494132 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
ATG4B-224ENST00000494132 NEO1Q92859 1461 aa23.68■■□□□ 1.38
ATG4B-224ENST00000494132 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
ATG4B-224ENST00000494132 CDK11AQ9UQ88 783 aaPredicted RBP23.68■■□□□ 1.38
ATG4B-224ENST00000494132 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
ATG4B-224ENST00000494132 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
ATG4B-224ENST00000494132 FANCAO15360 1455 aa23.66■■□□□ 1.38
ATG4B-224ENST00000494132 FRMPD1Q5SYB0 1578 aa23.65■■□□□ 1.38
ATG4B-224ENST00000494132 RAPGEF3O95398 923 aa23.64■■□□□ 1.37
ATG4B-224ENST00000494132 RICTORQ6R327 1708 aa23.62■■□□□ 1.37
ATG4B-224ENST00000494132 AKNAQ7Z591 1439 aa23.61■■□□□ 1.37
ATG4B-224ENST00000494132 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
ATG4B-224ENST00000494132 PLCH2O75038 1416 aa23.59■■□□□ 1.37
ATG4B-224ENST00000494132 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
ATG4B-224ENST00000494132 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
ATG4B-224ENST00000494132 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
ATG4B-224ENST00000494132 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
ATG4B-224ENST00000494132 ADGRL1O94910 1474 aa23.56■■□□□ 1.36
ATG4B-224ENST00000494132 ARHGAP5Q13017 1502 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms