RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
ACTB-213ENST00000493945 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
ACTB-213ENST00000493945 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
ACTB-213ENST00000493945 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
ACTB-213ENST00000493945 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
ACTB-213ENST00000493945 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
ACTB-213ENST00000493945 CARMIL2Q6F5E8 1435 aa24.04■■□□□ 1.44
ACTB-213ENST00000493945 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
ACTB-213ENST00000493945 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
ACTB-213ENST00000493945 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
ACTB-213ENST00000493945 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
ACTB-213ENST00000493945 KIAA0556O60303 1618 aa23.94■■□□□ 1.42
ACTB-213ENST00000493945 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
ACTB-213ENST00000493945 SAMD9Q5K651 1589 aa23.93■■□□□ 1.42
ACTB-213ENST00000493945 CLIP1P30622 1438 aa23.9■■□□□ 1.42
ACTB-213ENST00000493945 CEP162Q5TB80 1403 aa23.89■■□□□ 1.41
ACTB-213ENST00000493945 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
ACTB-213ENST00000493945 RANGAP1P46060 587 aaPredicted RBP23.87■■□□□ 1.41
ACTB-213ENST00000493945 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
ACTB-213ENST00000493945 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
ACTB-213ENST00000493945 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
ACTB-213ENST00000493945 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
ACTB-213ENST00000493945 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
ACTB-213ENST00000493945 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
ACTB-213ENST00000493945 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
ACTB-213ENST00000493945 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
ACTB-213ENST00000493945 PTPRGP23470 1445 aa23.76■■□□□ 1.39
ACTB-213ENST00000493945 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
ACTB-213ENST00000493945 P3H3Q8IVL6 736 aa23.72■■□□□ 1.39
ACTB-213ENST00000493945 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
ACTB-213ENST00000493945 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
ACTB-213ENST00000493945 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.38
ACTB-213ENST00000493945 UACAQ9BZF9 1416 aa23.63■■□□□ 1.37
ACTB-213ENST00000493945 HECW1Q76N89 1606 aa23.62■■□□□ 1.37
ACTB-213ENST00000493945 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
ACTB-213ENST00000493945 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
ACTB-213ENST00000493945 UHRF1BP1LA0JNW5 1464 aa23.6■■□□□ 1.37
ACTB-213ENST00000493945 ABCA8O94911 1581 aa23.6■■□□□ 1.37
ACTB-213ENST00000493945 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
ACTB-213ENST00000493945 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
ACTB-213ENST00000493945 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
ACTB-213ENST00000493945 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
ACTB-213ENST00000493945 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
ACTB-213ENST00000493945 NPM1P06748 294 aaKnown RBP eCLIP23.53■■□□□ 1.36
ACTB-213ENST00000493945 CCDC18Q5T9S5 1454 aa23.53■■□□□ 1.36
ACTB-213ENST00000493945 ADCY10Q96PN6 1610 aa23.52■■□□□ 1.36
ACTB-213ENST00000493945 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
ACTB-213ENST00000493945 APLP2Q06481 763 aa23.47■■□□□ 1.35
ACTB-213ENST00000493945 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
ACTB-213ENST00000493945 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
ACTB-213ENST00000493945 ZCCHC11Q5TAX3 1644 aaKnown RBP23.43■■□□□ 1.34
ACTB-213ENST00000493945 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
ACTB-213ENST00000493945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
ACTB-213ENST00000493945 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
ACTB-213ENST00000493945 CDK11AQ9UQ88 783 aaPredicted RBP23.42■■□□□ 1.34
ACTB-213ENST00000493945 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
ACTB-213ENST00000493945 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
ACTB-213ENST00000493945 MAPKBP1O60336 1514 aa23.36■■□□□ 1.33
ACTB-213ENST00000493945 ATP10BO94823 1461 aa23.36■■□□□ 1.33
ACTB-213ENST00000493945 LRRIQ1Q96JM4 1722 aa23.34■■□□□ 1.33
ACTB-213ENST00000493945 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
ACTB-213ENST00000493945 TIAM1Q13009 1591 aa23.33■■□□□ 1.33
ACTB-213ENST00000493945 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
ACTB-213ENST00000493945 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
ACTB-213ENST00000493945 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
ACTB-213ENST00000493945 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
ACTB-213ENST00000493945 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
ACTB-213ENST00000493945 ASXL2Q76L83 1435 aa23.27■■□□□ 1.32
ACTB-213ENST00000493945 KIF14Q15058 1648 aa23.24■■□□□ 1.31
ACTB-213ENST00000493945 TROQ12816 1431 aaPredicted RBP23.24■■□□□ 1.31
ACTB-213ENST00000493945 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
ACTB-213ENST00000493945 LRRC9Q6ZRR7 1453 aa23.19■■□□□ 1.3
ACTB-213ENST00000493945 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
ACTB-213ENST00000493945 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
ACTB-213ENST00000493945 GLI2P10070 1586 aa23.12■■□□□ 1.29
ACTB-213ENST00000493945 MAGI3Q5TCQ9 1506 aa23.11■■□□□ 1.29
ACTB-213ENST00000493945 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
ACTB-213ENST00000493945 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
ACTB-213ENST00000493945 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
ACTB-213ENST00000493945 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
ACTB-213ENST00000493945 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
ACTB-213ENST00000493945 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
ACTB-213ENST00000493945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.286e-78■□□□□ 9.9
ACTB-213ENST00000493945 FAM69CQ0P6D2 419 aa23.04■■□□□ 1.28
ACTB-213ENST00000493945 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
ACTB-213ENST00000493945 TTC37Q6PGP7 1564 aa23.02■■□□□ 1.28
ACTB-213ENST00000493945 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
ACTB-213ENST00000493945 KANK4Q5T7N3 995 aaPredicted RBP23.02■■□□□ 1.28
ACTB-213ENST00000493945 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
ACTB-213ENST00000493945 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
ACTB-213ENST00000493945 ARAP3Q8WWN8 1544 aa23.01■■□□□ 1.27
ACTB-213ENST00000493945 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
ACTB-213ENST00000493945 TEX14Q8IWB6 1497 aa22.99■■□□□ 1.27
ACTB-213ENST00000493945 PREX2Q70Z35 1606 aa22.99■■□□□ 1.27
ACTB-213ENST00000493945 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
ACTB-213ENST00000493945 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.26
ACTB-213ENST00000493945 MYOM3Q5VTT5 1437 aa22.94■■□□□ 1.26
ACTB-213ENST00000493945 PLCH2O75038 1416 aa22.93■■□□□ 1.26
ACTB-213ENST00000493945 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
ACTB-213ENST00000493945 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms