RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
VEGFA-214ENST00000493786 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
VEGFA-214ENST00000493786 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
VEGFA-214ENST00000493786 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
VEGFA-214ENST00000493786 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
VEGFA-214ENST00000493786 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
VEGFA-214ENST00000493786 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
VEGFA-214ENST00000493786 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
VEGFA-214ENST00000493786 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-214ENST00000493786 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
VEGFA-214ENST00000493786 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-214ENST00000493786 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
VEGFA-214ENST00000493786 ARHGEF11O15085 1522 aa12.27□□□□□ -0.45
VEGFA-214ENST00000493786 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.45
VEGFA-214ENST00000493786 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
VEGFA-214ENST00000493786 RIMBP3CA6NJZ7 1639 aa12.23□□□□□ -0.45
VEGFA-214ENST00000493786 RIMBP3BA6NNM3 1639 aa12.23□□□□□ -0.45
VEGFA-214ENST00000493786 RIMBP3Q9UFD9 1639 aa12.23□□□□□ -0.45
VEGFA-214ENST00000493786 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
VEGFA-214ENST00000493786 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
VEGFA-214ENST00000493786 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.46
VEGFA-214ENST00000493786 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
VEGFA-214ENST00000493786 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-214ENST00000493786 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
VEGFA-214ENST00000493786 PTPRGP23470 1445 aa12.19□□□□□ -0.46
VEGFA-214ENST00000493786 CLIP1P30622 1438 aa12.19□□□□□ -0.46
VEGFA-214ENST00000493786 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
VEGFA-214ENST00000493786 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
VEGFA-214ENST00000493786 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
VEGFA-214ENST00000493786 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
VEGFA-214ENST00000493786 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
VEGFA-214ENST00000493786 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
VEGFA-214ENST00000493786 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
VEGFA-214ENST00000493786 UACAQ9BZF9 1416 aa12.11□□□□□ -0.47
VEGFA-214ENST00000493786 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
VEGFA-214ENST00000493786 PLB1Q6P1J6 1458 aa12.07□□□□□ -0.48
VEGFA-214ENST00000493786 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
VEGFA-214ENST00000493786 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-214ENST00000493786 UHRF1BP1LA0JNW5 1464 aa12.06□□□□□ -0.48
VEGFA-214ENST00000493786 ABCA8O94911 1581 aa12.05□□□□□ -0.48
VEGFA-214ENST00000493786 RAPGEF6Q8TEU7 1601 aa12.04□□□□□ -0.48
VEGFA-214ENST00000493786 ADCY10Q96PN6 1610 aa12.04□□□□□ -0.48
VEGFA-214ENST00000493786 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
VEGFA-214ENST00000493786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-214ENST00000493786 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
VEGFA-214ENST00000493786 CASKIN1Q8WXD9 1431 aa12.02□□□□□ -0.49
VEGFA-214ENST00000493786 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
VEGFA-214ENST00000493786 VPS8Q8N3P4 1428 aa12.01□□□□□ -0.49
VEGFA-214ENST00000493786 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
VEGFA-214ENST00000493786 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
VEGFA-214ENST00000493786 NUP153P49790 1475 aaKnown RBP11.99□□□□□ -0.49
VEGFA-214ENST00000493786 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
VEGFA-214ENST00000493786 CCDC18Q5T9S5 1454 aa11.97□□□□□ -0.49
VEGFA-214ENST00000493786 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-214ENST00000493786 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
VEGFA-214ENST00000493786 APLP2Q06481 763 aa11.96□□□□□ -0.49
VEGFA-214ENST00000493786 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.5
VEGFA-214ENST00000493786 ATP10BO94823 1461 aa11.95□□□□□ -0.5
VEGFA-214ENST00000493786 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
VEGFA-214ENST00000493786 ASXL2Q76L83 1435 aa11.94□□□□□ -0.5
VEGFA-214ENST00000493786 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
VEGFA-214ENST00000493786 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
VEGFA-214ENST00000493786 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
VEGFA-214ENST00000493786 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-214ENST00000493786 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
VEGFA-214ENST00000493786 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
VEGFA-214ENST00000493786 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
VEGFA-214ENST00000493786 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
VEGFA-214ENST00000493786 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-214ENST00000493786 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
VEGFA-214ENST00000493786 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
VEGFA-214ENST00000493786 LRRIQ1Q96JM4 1722 aa11.86□□□□□ -0.51
VEGFA-214ENST00000493786 CFAP43Q8NDM7 1665 aa11.85□□□□□ -0.51
VEGFA-214ENST00000493786 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
VEGFA-214ENST00000493786 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
VEGFA-214ENST00000493786 KIF14Q15058 1648 aa11.83□□□□□ -0.52
VEGFA-214ENST00000493786 GLI2P10070 1586 aa11.82□□□□□ -0.52
VEGFA-214ENST00000493786 LRRC9Q6ZRR7 1453 aa11.82□□□□□ -0.52
VEGFA-214ENST00000493786 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
VEGFA-214ENST00000493786 CD109Q6YHK3 1445 aa11.79□□□□□ -0.52
VEGFA-214ENST00000493786 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
VEGFA-214ENST00000493786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.78□□□□□ -0.525e-6■□□□□ 9.5
VEGFA-214ENST00000493786 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
VEGFA-214ENST00000493786 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
VEGFA-214ENST00000493786 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.52
VEGFA-214ENST00000493786 KIF13AQ9H1H9 1805 aa11.77□□□□□ -0.52
VEGFA-214ENST00000493786 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
VEGFA-214ENST00000493786 TTC37Q6PGP7 1564 aa11.76□□□□□ -0.53
VEGFA-214ENST00000493786 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
VEGFA-214ENST00000493786 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
VEGFA-214ENST00000493786 PLCH2O75038 1416 aa11.73□□□□□ -0.53
VEGFA-214ENST00000493786 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
VEGFA-214ENST00000493786 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
VEGFA-214ENST00000493786 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
VEGFA-214ENST00000493786 EFCAB2Q5VUJ9 269 aa11.72□□□□□ -0.53
VEGFA-214ENST00000493786 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-214ENST00000493786 TSPOAP1O95153 1857 aa11.72□□□□□ -0.53
VEGFA-214ENST00000493786 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.53
VEGFA-214ENST00000493786 FANCAO15360 1455 aa11.71□□□□□ -0.53
VEGFA-214ENST00000493786 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms