RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 RUSC2Q8N2Y8 1516 aa38.22■■■■□ 3.71
PFDN4-205ENST00000493356 ABCC10Q5T3U5 1492 aa37.97■■■■□ 3.67
PFDN4-205ENST00000493356 MAPKBP1O60336 1514 aa37.97■■■■□ 3.67
PFDN4-205ENST00000493356 ADCY10Q96PN6 1610 aa37.96■■■■□ 3.67
PFDN4-205ENST00000493356 KIAA0586Q9BVV6 1533 aa37.96■■■■□ 3.67
PFDN4-205ENST00000493356 IGF1RP08069 1367 aa37.94■■■■□ 3.66
PFDN4-205ENST00000493356 NPM1P06748 294 aaKnown RBP eCLIP37.94■■■■□ 3.66
PFDN4-205ENST00000493356 FAM69CQ0P6D2 419 aa37.93■■■■□ 3.66
PFDN4-205ENST00000493356 CUL7Q14999 1698 aa37.92■■■■□ 3.66
PFDN4-205ENST00000493356 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
PFDN4-205ENST00000493356 DIP2BQ9P265 1576 aa37.89■■■■□ 3.66
PFDN4-205ENST00000493356 CARMIL1Q5VZK9 1371 aa37.68■■■■□ 3.62
PFDN4-205ENST00000493356 PTPRGP23470 1445 aa37.66■■■■□ 3.62
PFDN4-205ENST00000493356 KDM6BO15054 1643 aa37.64■■■■□ 3.62
PFDN4-205ENST00000493356 TSPOAP1O95153 1857 aa37.64■■■■□ 3.62
PFDN4-205ENST00000493356 CARMIL2Q6F5E8 1435 aa37.57■■■■□ 3.6
PFDN4-205ENST00000493356 TNIKQ9UKE5 1360 aa37.56■■■■□ 3.6
PFDN4-205ENST00000493356 IQGAP2Q13576 1575 aa37.55■■■■□ 3.6
PFDN4-205ENST00000493356 TTBK1Q5TCY1 1321 aaPredicted RBP37.55■■■■□ 3.6
PFDN4-205ENST00000493356 ABCC2Q92887 1545 aa37.53■■■■□ 3.6
PFDN4-205ENST00000493356 ASXL2Q76L83 1435 aa37.43■■■■□ 3.58
PFDN4-205ENST00000493356 UHRF1BP1LA0JNW5 1464 aa37.42■■■■□ 3.58
PFDN4-205ENST00000493356 PLB1Q6P1J6 1458 aa37.41■■■■□ 3.58
PFDN4-205ENST00000493356 KDM4FA0A1W2PPD8 638 aa37.41■■■■□ 3.58
PFDN4-205ENST00000493356 DISP1Q96F81 1524 aa37.41■■■■□ 3.58
PFDN4-205ENST00000493356 GLI2P10070 1586 aa37.38■■■■□ 3.58
PFDN4-205ENST00000493356 UACAQ9BZF9 1416 aa37.36■■■■□ 3.57
PFDN4-205ENST00000493356 PPRC1Q5VV67 1664 aaKnown RBP37.36■■■■□ 3.57
PFDN4-205ENST00000493356 RAPGEF2Q9Y4G8 1499 aa37.31■■■■□ 3.56
PFDN4-205ENST00000493356 UGGT2Q9NYU1 1516 aa37.31■■■■□ 3.56
PFDN4-205ENST00000493356 KDM5BQ9UGL1 1544 aa37.26■■■■□ 3.56
PFDN4-205ENST00000493356 KIAA0556O60303 1618 aa37.22■■■■□ 3.55
PFDN4-205ENST00000493356 EPRSP07814 1512 aaKnown RBP37.2■■■■□ 3.55
PFDN4-205ENST00000493356 ZCCHC11Q5TAX3 1644 aaKnown RBP37.19■■■■□ 3.54
PFDN4-205ENST00000493356 MAP3K4Q9Y6R4 1608 aa37.18■■■■□ 3.54
PFDN4-205ENST00000493356 COL17A1Q9UMD9 1497 aaPredicted RBP37.12■■■■□ 3.53
PFDN4-205ENST00000493356 TEX14Q8IWB6 1497 aa37.07■■■■□ 3.53
PFDN4-205ENST00000493356 CTTNBP2Q8WZ74 1663 aa37.06■■■■□ 3.52
PFDN4-205ENST00000493356 ADGRL1O94910 1474 aa37.04■■■■□ 3.52
PFDN4-205ENST00000493356 WDR7Q9Y4E6 1490 aa37.01■■■■□ 3.52
PFDN4-205ENST00000493356 GOLGA3Q08378 1498 aa36.94■■■■□ 3.5
PFDN4-205ENST00000493356 ABCA8O94911 1581 aa36.91■■■■□ 3.5
PFDN4-205ENST00000493356 PRXQ9BXM0 1461 aa36.85■■■■□ 3.49
PFDN4-205ENST00000493356 CFAP43Q8NDM7 1665 aa36.84■■■■□ 3.49
PFDN4-205ENST00000493356 MAGI3Q5TCQ9 1506 aa36.82■■■■□ 3.48
PFDN4-205ENST00000493356 CD109Q6YHK3 1445 aa36.81■■■■□ 3.48
PFDN4-205ENST00000493356 KCNH8Q96L42 1107 aa36.77■■■■□ 3.48
PFDN4-205ENST00000493356 HECW2Q9P2P5 1572 aa36.66■■■■□ 3.46
PFDN4-205ENST00000493356 ILDR1Q86SU0 546 aaPredicted RBP36.63■■■■□ 3.45
PFDN4-205ENST00000493356 ATP10BO94823 1461 aa36.59■■■■□ 3.45
PFDN4-205ENST00000493356 ARID3CA6NKF2 412 aa36.57■■■■□ 3.44
PFDN4-205ENST00000493356 P3H3Q8IVL6 736 aa36.57■■■■□ 3.44
PFDN4-205ENST00000493356 FAM9AQ8IZU1 332 aaPredicted RBP36.55■■■■□ 3.44
PFDN4-205ENST00000493356 ARAP3Q8WWN8 1544 aa36.54■■■■□ 3.44
PFDN4-205ENST00000493356 KIF21BO75037 1637 aa36.54■■■■□ 3.44
PFDN4-205ENST00000493356 SAMD9Q5K651 1589 aa36.51■■■■□ 3.44
PFDN4-205ENST00000493356 ABCA9Q8IUA7 1624 aa36.49■■■■□ 3.43
PFDN4-205ENST00000493356 RAPGEF6Q8TEU7 1601 aa36.44■■■■□ 3.42
PFDN4-205ENST00000493356 CSRNP3Q8WYN3 585 aa36.43■■■■□ 3.42
PFDN4-205ENST00000493356 PHLDB1Q86UU1 1377 aa36.4■■■■□ 3.42
PFDN4-205ENST00000493356 NEO1Q92859 1461 aa36.33■■■■□ 3.41
PFDN4-205ENST00000493356 NUP153P49790 1475 aaKnown RBP36.31■■■■□ 3.4
PFDN4-205ENST00000493356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.29■■■■□ 3.4
PFDN4-205ENST00000493356 RAPGEF3O95398 923 aa36.29■■■■□ 3.4
PFDN4-205ENST00000493356 HNRNPUL2Q1KMD3 747 aaKnown RBP36.29■■■■□ 3.4
PFDN4-205ENST00000493356 ADAMTSL3P82987 1691 aa36.27■■■■□ 3.4
PFDN4-205ENST00000493356 FRMPD1Q5SYB0 1578 aa36.24■■■■□ 3.39
PFDN4-205ENST00000493356 FHOD3Q2V2M9 1422 aa36.23■■■■□ 3.39
PFDN4-205ENST00000493356 EEA1Q15075 1411 aa36.22■■■■□ 3.39
PFDN4-205ENST00000493356 PTPRMP28827 1452 aa36.21■■■■□ 3.39
PFDN4-205ENST00000493356 RANGAP1P46060 587 aaPredicted RBP36.19■■■■□ 3.38
PFDN4-205ENST00000493356 BCORL1Q5H9F3 1711 aa36.15■■■■□ 3.38
PFDN4-205ENST00000493356 PLEKHD1A6NEE1 506 aa36.1■■■■□ 3.37
PFDN4-205ENST00000493356 MADDQ8WXG6 1647 aa36.08■■■■□ 3.37
PFDN4-205ENST00000493356 RICTORQ6R327 1708 aa36.08■■■■□ 3.37
PFDN4-205ENST00000493356 ARHGEF40Q8TER5 1519 aa36.07■■■■□ 3.36
PFDN4-205ENST00000493356 ARID4BQ4LE39 1312 aaPredicted RBP36.06■■■■□ 3.36
PFDN4-205ENST00000493356 DENND4BO75064 1496 aaPredicted RBP36.05■■■■□ 3.36
PFDN4-205ENST00000493356 EFCAB5A4FU69 1503 aa36.05■■■■□ 3.36
PFDN4-205ENST00000493356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.04■■■■□ 3.36
PFDN4-205ENST00000493356 CFAP74Q9C0B2 1584 aa36.03■■■■□ 3.36
PFDN4-205ENST00000493356 AKNAQ7Z591 1439 aa36.03■■■■□ 3.36
PFDN4-205ENST00000493356 FANCAO15360 1455 aa36.03■■■■□ 3.36
PFDN4-205ENST00000493356 TTC37Q6PGP7 1564 aa36■■■■□ 3.35
PFDN4-205ENST00000493356 PCF11O94913 1555 aaKnown RBP35.96■■■■□ 3.35
PFDN4-205ENST00000493356 RIMS1Q86UR5 1692 aaKnown RBP35.94■■■■□ 3.34
PFDN4-205ENST00000493356 ZMYM4Q5VZL5 1548 aa35.93■■■■□ 3.34
PFDN4-205ENST00000493356 CDK13Q14004 1512 aaKnown RBP35.92■■■■□ 3.34
PFDN4-205ENST00000493356 LMTK3Q96Q04 1460 aa35.92■■■■□ 3.34
PFDN4-205ENST00000493356 FBXO41Q8TF61 875 aa35.89■■■■□ 3.34
PFDN4-205ENST00000493356 ZFYVE16Q7Z3T8 1539 aa35.87■■■■□ 3.33
PFDN4-205ENST00000493356 SIGLEC1Q9BZZ2 1709 aa35.86■■■■□ 3.33
PFDN4-205ENST00000493356 YEATS2Q9ULM3 1422 aa35.85■■■■□ 3.33
PFDN4-205ENST00000493356 POGZQ7Z3K3 1410 aa35.83■■■■□ 3.33
PFDN4-205ENST00000493356 MAGI2Q86UL8 1455 aa35.82■■■■□ 3.32
PFDN4-205ENST00000493356 HECW1Q76N89 1606 aa35.8■■■■□ 3.32
PFDN4-205ENST00000493356 PLCH2O75038 1416 aa35.79■■■■□ 3.32
PFDN4-205ENST00000493356 SCAPERQ9BY12 1400 aa35.76■■■■□ 3.32
PFDN4-205ENST00000493356 FMN1Q68DA7 1419 aa35.73■■■■□ 3.31
PFDN4-205ENST00000493356 MYO5CQ9NQX4 1742 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms