RNA–Protein interactions for RNA: ENST00000493283.5

PTCD2-205, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-205ENST00000493283 SHROOM2Q13796 1616 aa23.95■■□□□ 1.43
PTCD2-205ENST00000493283 PRXQ9BXM0 1461 aa23.9■■□□□ 1.42
PTCD2-205ENST00000493283 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
PTCD2-205ENST00000493283 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
PTCD2-205ENST00000493283 IQGAP2Q13576 1575 aa23.84■■□□□ 1.41
PTCD2-205ENST00000493283 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
PTCD2-205ENST00000493283 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
PTCD2-205ENST00000493283 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
PTCD2-205ENST00000493283 CARMIL2Q6F5E8 1435 aa23.78■■□□□ 1.4
PTCD2-205ENST00000493283 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
PTCD2-205ENST00000493283 KIF21BO75037 1637 aa23.73■■□□□ 1.39
PTCD2-205ENST00000493283 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.38
PTCD2-205ENST00000493283 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
PTCD2-205ENST00000493283 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
PTCD2-205ENST00000493283 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
PTCD2-205ENST00000493283 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
PTCD2-205ENST00000493283 KIAA0556O60303 1618 aa23.58■■□□□ 1.36
PTCD2-205ENST00000493283 DISP1Q96F81 1524 aa23.58■■□□□ 1.36
PTCD2-205ENST00000493283 PTPRGP23470 1445 aa23.58■■□□□ 1.36
PTCD2-205ENST00000493283 NPM1P06748 294 aaKnown RBP eCLIP23.49■■□□□ 1.35
PTCD2-205ENST00000493283 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
PTCD2-205ENST00000493283 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
PTCD2-205ENST00000493283 UHRF1BP1LA0JNW5 1464 aa23.45■■□□□ 1.34
PTCD2-205ENST00000493283 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
PTCD2-205ENST00000493283 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
PTCD2-205ENST00000493283 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
PTCD2-205ENST00000493283 ABCC2Q92887 1545 aa23.39■■□□□ 1.34
PTCD2-205ENST00000493283 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
PTCD2-205ENST00000493283 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
PTCD2-205ENST00000493283 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
PTCD2-205ENST00000493283 ABCA8O94911 1581 aa23.3■■□□□ 1.32
PTCD2-205ENST00000493283 KDM5BQ9UGL1 1544 aa23.29■■□□□ 1.32
PTCD2-205ENST00000493283 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
PTCD2-205ENST00000493283 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
PTCD2-205ENST00000493283 P3H3Q8IVL6 736 aa23.24■■□□□ 1.31
PTCD2-205ENST00000493283 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
PTCD2-205ENST00000493283 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
PTCD2-205ENST00000493283 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
PTCD2-205ENST00000493283 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
PTCD2-205ENST00000493283 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
PTCD2-205ENST00000493283 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
PTCD2-205ENST00000493283 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
PTCD2-205ENST00000493283 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
PTCD2-205ENST00000493283 DIP2BQ9P265 1576 aa23.14■■□□□ 1.3
PTCD2-205ENST00000493283 CLIP1P30622 1438 aa23.14■■□□□ 1.29
PTCD2-205ENST00000493283 WDR7Q9Y4E6 1490 aa23.12■■□□□ 1.29
PTCD2-205ENST00000493283 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
PTCD2-205ENST00000493283 GLI2P10070 1586 aa23.1■■□□□ 1.29
PTCD2-205ENST00000493283 FAM69CQ0P6D2 419 aa23.1■■□□□ 1.29
PTCD2-205ENST00000493283 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
PTCD2-205ENST00000493283 NUP153P49790 1475 aaKnown RBP23.08■■□□□ 1.29
PTCD2-205ENST00000493283 ATP10BO94823 1461 aa23.07■■□□□ 1.28
PTCD2-205ENST00000493283 EPRSP07814 1512 aaKnown RBP23.04■■□□□ 1.28
PTCD2-205ENST00000493283 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
PTCD2-205ENST00000493283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
PTCD2-205ENST00000493283 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
PTCD2-205ENST00000493283 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
PTCD2-205ENST00000493283 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
PTCD2-205ENST00000493283 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
PTCD2-205ENST00000493283 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
PTCD2-205ENST00000493283 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
PTCD2-205ENST00000493283 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
PTCD2-205ENST00000493283 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
PTCD2-205ENST00000493283 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
PTCD2-205ENST00000493283 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
PTCD2-205ENST00000493283 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
PTCD2-205ENST00000493283 PCF11O94913 1555 aaKnown RBP22.92■■□□□ 1.26
PTCD2-205ENST00000493283 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
PTCD2-205ENST00000493283 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
PTCD2-205ENST00000493283 ABCA9Q8IUA7 1624 aa22.89■■□□□ 1.25
PTCD2-205ENST00000493283 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
PTCD2-205ENST00000493283 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
PTCD2-205ENST00000493283 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
PTCD2-205ENST00000493283 TSPOAP1O95153 1857 aa22.87■■□□□ 1.25
PTCD2-205ENST00000493283 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
PTCD2-205ENST00000493283 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
PTCD2-205ENST00000493283 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
PTCD2-205ENST00000493283 KIF14Q15058 1648 aa22.8■■□□□ 1.24
PTCD2-205ENST00000493283 KDM6BO15054 1643 aa22.79■■□□□ 1.24
PTCD2-205ENST00000493283 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
PTCD2-205ENST00000493283 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.24
PTCD2-205ENST00000493283 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
PTCD2-205ENST00000493283 NEO1Q92859 1461 aa22.74■■□□□ 1.23
PTCD2-205ENST00000493283 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTCD2-205ENST00000493283 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
PTCD2-205ENST00000493283 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
PTCD2-205ENST00000493283 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
PTCD2-205ENST00000493283 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
PTCD2-205ENST00000493283 MAP3K1Q13233 1512 aa22.67■■□□□ 1.22
PTCD2-205ENST00000493283 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
PTCD2-205ENST00000493283 PLCH2O75038 1416 aa22.66■■□□□ 1.22
PTCD2-205ENST00000493283 FANCAO15360 1455 aa22.65■■□□□ 1.22
PTCD2-205ENST00000493283 APLP2Q06481 763 aa22.62■■□□□ 1.21
PTCD2-205ENST00000493283 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
PTCD2-205ENST00000493283 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
PTCD2-205ENST00000493283 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
PTCD2-205ENST00000493283 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
PTCD2-205ENST00000493283 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
PTCD2-205ENST00000493283 DENND4BO75064 1496 aaPredicted RBP22.54■■□□□ 1.2
PTCD2-205ENST00000493283 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms