RNA–Protein interactions for RNA: ENST00000493283.5

PTCD2-205, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-205ENST00000493283 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
PTCD2-205ENST00000493283 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
PTCD2-205ENST00000493283 ABCC9O60706 1549 aa29.86■■■□□ 2.37
PTCD2-205ENST00000493283 NACADO15069 1562 aa28.96■■■□□ 2.23
PTCD2-205ENST00000493283 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PTCD2-205ENST00000493283 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.21
PTCD2-205ENST00000493283 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
PTCD2-205ENST00000493283 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
PTCD2-205ENST00000493283 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
PTCD2-205ENST00000493283 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
PTCD2-205ENST00000493283 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
PTCD2-205ENST00000493283 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
PTCD2-205ENST00000493283 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
PTCD2-205ENST00000493283 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
PTCD2-205ENST00000493283 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
PTCD2-205ENST00000493283 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
PTCD2-205ENST00000493283 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
PTCD2-205ENST00000493283 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
PTCD2-205ENST00000493283 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
PTCD2-205ENST00000493283 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
PTCD2-205ENST00000493283 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
PTCD2-205ENST00000493283 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
PTCD2-205ENST00000493283 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
PTCD2-205ENST00000493283 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
PTCD2-205ENST00000493283 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
PTCD2-205ENST00000493283 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
PTCD2-205ENST00000493283 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
PTCD2-205ENST00000493283 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
PTCD2-205ENST00000493283 WIZO95785 1651 aa26.28■■□□□ 1.8
PTCD2-205ENST00000493283 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
PTCD2-205ENST00000493283 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
PTCD2-205ENST00000493283 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
PTCD2-205ENST00000493283 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
PTCD2-205ENST00000493283 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
PTCD2-205ENST00000493283 NESP48681 1621 aa25.81■■□□□ 1.72
PTCD2-205ENST00000493283 CFTRP13569 1480 aa25.74■■□□□ 1.71
PTCD2-205ENST00000493283 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PTCD2-205ENST00000493283 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
PTCD2-205ENST00000493283 CUX2O14529 1486 aa25.62■■□□□ 1.69
PTCD2-205ENST00000493283 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
PTCD2-205ENST00000493283 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
PTCD2-205ENST00000493283 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
PTCD2-205ENST00000493283 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
PTCD2-205ENST00000493283 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
PTCD2-205ENST00000493283 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
PTCD2-205ENST00000493283 WDR62O43379 1518 aa25.41■■□□□ 1.66
PTCD2-205ENST00000493283 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
PTCD2-205ENST00000493283 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
PTCD2-205ENST00000493283 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
PTCD2-205ENST00000493283 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
PTCD2-205ENST00000493283 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
PTCD2-205ENST00000493283 CUX1P39880 1505 aa24.94■■□□□ 1.58
PTCD2-205ENST00000493283 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
PTCD2-205ENST00000493283 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
PTCD2-205ENST00000493283 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
PTCD2-205ENST00000493283 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
PTCD2-205ENST00000493283 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
PTCD2-205ENST00000493283 SOGA1O94964 1423 aa24.85■■□□□ 1.57
PTCD2-205ENST00000493283 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
PTCD2-205ENST00000493283 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
PTCD2-205ENST00000493283 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
PTCD2-205ENST00000493283 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
PTCD2-205ENST00000493283 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
PTCD2-205ENST00000493283 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
PTCD2-205ENST00000493283 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
PTCD2-205ENST00000493283 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.53
PTCD2-205ENST00000493283 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
PTCD2-205ENST00000493283 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
PTCD2-205ENST00000493283 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
PTCD2-205ENST00000493283 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
PTCD2-205ENST00000493283 MAGI1Q96QZ7 1491 aaPredicted RBP24.57■■□□□ 1.52
PTCD2-205ENST00000493283 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
PTCD2-205ENST00000493283 OSCARQ8IYS5 282 aa24.52■■□□□ 1.52
PTCD2-205ENST00000493283 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
PTCD2-205ENST00000493283 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
PTCD2-205ENST00000493283 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.51
PTCD2-205ENST00000493283 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
PTCD2-205ENST00000493283 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
PTCD2-205ENST00000493283 CHD1O14646 1710 aa24.41■■□□□ 1.5
PTCD2-205ENST00000493283 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
PTCD2-205ENST00000493283 FBLN2P98095 1184 aa24.36■■□□□ 1.49
PTCD2-205ENST00000493283 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
PTCD2-205ENST00000493283 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
PTCD2-205ENST00000493283 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
PTCD2-205ENST00000493283 CUL7Q14999 1698 aa24.27■■□□□ 1.48
PTCD2-205ENST00000493283 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
PTCD2-205ENST00000493283 IGF1RP08069 1367 aa24.19■■□□□ 1.46
PTCD2-205ENST00000493283 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
PTCD2-205ENST00000493283 NUP160Q12769 1436 aa24.14■■□□□ 1.45
PTCD2-205ENST00000493283 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
PTCD2-205ENST00000493283 EEA1Q15075 1411 aa24.1■■□□□ 1.45
PTCD2-205ENST00000493283 ARHGEF11O15085 1522 aa24.07■■□□□ 1.44
PTCD2-205ENST00000493283 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
PTCD2-205ENST00000493283 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
PTCD2-205ENST00000493283 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
PTCD2-205ENST00000493283 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
PTCD2-205ENST00000493283 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
PTCD2-205ENST00000493283 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
PTCD2-205ENST00000493283 RUSC2Q8N2Y8 1516 aa23.97■■□□□ 1.43
PTCD2-205ENST00000493283 KIAA0586Q9BVV6 1533 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms