RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
SNRNP200-207ENST00000493271 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNRNP200-207ENST00000493271 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
SNRNP200-207ENST00000493271 ABCC10Q5T3U5 1492 aa19.5■□□□□ 0.71
SNRNP200-207ENST00000493271 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
SNRNP200-207ENST00000493271 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
SNRNP200-207ENST00000493271 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
SNRNP200-207ENST00000493271 CUL7Q14999 1698 aa19.44■□□□□ 0.7
SNRNP200-207ENST00000493271 DIP2BQ9P265 1576 aa19.42■□□□□ 0.7
SNRNP200-207ENST00000493271 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
SNRNP200-207ENST00000493271 IGF1RP08069 1367 aa19.41■□□□□ 0.7
SNRNP200-207ENST00000493271 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
SNRNP200-207ENST00000493271 KDM6BO15054 1643 aa19.32■□□□□ 0.68
SNRNP200-207ENST00000493271 PTPRGP23470 1445 aa19.31■□□□□ 0.68
SNRNP200-207ENST00000493271 CARMIL1Q5VZK9 1371 aa19.29■□□□□ 0.68
SNRNP200-207ENST00000493271 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
SNRNP200-207ENST00000493271 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
SNRNP200-207ENST00000493271 IQGAP2Q13576 1575 aa19.23■□□□□ 0.67
SNRNP200-207ENST00000493271 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
SNRNP200-207ENST00000493271 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
SNRNP200-207ENST00000493271 GLI2P10070 1586 aa19.21■□□□□ 0.67
SNRNP200-207ENST00000493271 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
SNRNP200-207ENST00000493271 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
SNRNP200-207ENST00000493271 KDM4FA0A1W2PPD8 638 aa19.17■□□□□ 0.66
SNRNP200-207ENST00000493271 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SNRNP200-207ENST00000493271 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
SNRNP200-207ENST00000493271 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
SNRNP200-207ENST00000493271 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
SNRNP200-207ENST00000493271 KDM5BQ9UGL1 1544 aa19.11■□□□□ 0.65
SNRNP200-207ENST00000493271 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
SNRNP200-207ENST00000493271 PPRC1Q5VV67 1664 aaKnown RBP19.09■□□□□ 0.65
SNRNP200-207ENST00000493271 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
SNRNP200-207ENST00000493271 EPRSP07814 1512 aaKnown RBP19.08■□□□□ 0.64
SNRNP200-207ENST00000493271 KIAA0556O60303 1618 aa19.05■□□□□ 0.64
SNRNP200-207ENST00000493271 MAP3K4Q9Y6R4 1608 aa19.05■□□□□ 0.64
SNRNP200-207ENST00000493271 ZCCHC11Q5TAX3 1644 aaKnown RBP19.02■□□□□ 0.64
SNRNP200-207ENST00000493271 ADGRL1O94910 1474 aa19■□□□□ 0.63
SNRNP200-207ENST00000493271 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
SNRNP200-207ENST00000493271 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
SNRNP200-207ENST00000493271 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
SNRNP200-207ENST00000493271 CTTNBP2Q8WZ74 1663 aa18.94■□□□□ 0.62
SNRNP200-207ENST00000493271 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
SNRNP200-207ENST00000493271 CFAP43Q8NDM7 1665 aa18.9■□□□□ 0.62
SNRNP200-207ENST00000493271 ABCA8O94911 1581 aa18.89■□□□□ 0.61
SNRNP200-207ENST00000493271 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
SNRNP200-207ENST00000493271 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
SNRNP200-207ENST00000493271 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
SNRNP200-207ENST00000493271 ILDR1Q86SU0 546 aaPredicted RBP18.8■□□□□ 0.6
SNRNP200-207ENST00000493271 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
SNRNP200-207ENST00000493271 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
SNRNP200-207ENST00000493271 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
SNRNP200-207ENST00000493271 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.6
SNRNP200-207ENST00000493271 ATP10BO94823 1461 aa18.71■□□□□ 0.59
SNRNP200-207ENST00000493271 ABCA9Q8IUA7 1624 aa18.71■□□□□ 0.58
SNRNP200-207ENST00000493271 KIF21BO75037 1637 aa18.68■□□□□ 0.58
SNRNP200-207ENST00000493271 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
SNRNP200-207ENST00000493271 NEO1Q92859 1461 aa18.67■□□□□ 0.58
SNRNP200-207ENST00000493271 RAPGEF6Q8TEU7 1601 aa18.64■□□□□ 0.57
SNRNP200-207ENST00000493271 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
SNRNP200-207ENST00000493271 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
SNRNP200-207ENST00000493271 EEA1Q15075 1411 aa18.6■□□□□ 0.57
SNRNP200-207ENST00000493271 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
SNRNP200-207ENST00000493271 ADAMTSL3P82987 1691 aa18.59■□□□□ 0.57
SNRNP200-207ENST00000493271 PTPRMP28827 1452 aa18.58■□□□□ 0.56
SNRNP200-207ENST00000493271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
SNRNP200-207ENST00000493271 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
SNRNP200-207ENST00000493271 NUP153P49790 1475 aaKnown RBP18.56■□□□□ 0.56
SNRNP200-207ENST00000493271 RAPGEF3O95398 923 aa18.55■□□□□ 0.56
SNRNP200-207ENST00000493271 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.56
SNRNP200-207ENST00000493271 FRMPD1Q5SYB0 1578 aa18.52■□□□□ 0.56
SNRNP200-207ENST00000493271 CFAP74Q9C0B2 1584 aa18.52■□□□□ 0.56
SNRNP200-207ENST00000493271 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.56
SNRNP200-207ENST00000493271 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
SNRNP200-207ENST00000493271 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
SNRNP200-207ENST00000493271 ARHGEF40Q8TER5 1519 aa18.49■□□□□ 0.55
SNRNP200-207ENST00000493271 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
SNRNP200-207ENST00000493271 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
SNRNP200-207ENST00000493271 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
SNRNP200-207ENST00000493271 FANCAO15360 1455 aa18.47■□□□□ 0.55
SNRNP200-207ENST00000493271 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
SNRNP200-207ENST00000493271 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
SNRNP200-207ENST00000493271 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
SNRNP200-207ENST00000493271 POGZQ7Z3K3 1410 aa18.46■□□□□ 0.55
SNRNP200-207ENST00000493271 RICTORQ6R327 1708 aa18.46■□□□□ 0.55
SNRNP200-207ENST00000493271 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
SNRNP200-207ENST00000493271 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
SNRNP200-207ENST00000493271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNRNP200-207ENST00000493271 LMTK3Q96Q04 1460 aa18.42■□□□□ 0.54
SNRNP200-207ENST00000493271 ZFYVE16Q7Z3T8 1539 aa18.39■□□□□ 0.54
SNRNP200-207ENST00000493271 RANGAP1P46060 587 aaPredicted RBP18.39■□□□□ 0.53
SNRNP200-207ENST00000493271 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
SNRNP200-207ENST00000493271 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
SNRNP200-207ENST00000493271 PLCH2O75038 1416 aa18.35■□□□□ 0.53
SNRNP200-207ENST00000493271 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
SNRNP200-207ENST00000493271 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
SNRNP200-207ENST00000493271 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
SNRNP200-207ENST00000493271 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
SNRNP200-207ENST00000493271 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
SNRNP200-207ENST00000493271 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
SNRNP200-207ENST00000493271 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms