RNA–Protein interactions for RNA: ENST00000493104.5

MRPL38-213, Transcript of mitochondrial ribosomal protein L38, human

TSL 2

Gene MRPL38, Length 1,116 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL38-213	ENST00000493104	RUSC2	Q8N2Y8	1516 aa		33.31	■■■□□ 2.92
MRPL38-213	ENST00000493104	PRG4	Q92954	1404 aa	Predicted RBP	33.28	■■■□□ 2.92
MRPL38-213	ENST00000493104	KIAA0586	Q9BVV6	1533 aa		33.2	■■■□□ 2.91
MRPL38-213	ENST00000493104	CARMIL1	Q5VZK9	1371 aa		33.2	■■■□□ 2.9
MRPL38-213	ENST00000493104	RAPGEF2	Q9Y4G8	1499 aa		32.93	■■■□□ 2.86
MRPL38-213	ENST00000493104	IQGAP2	Q13576	1575 aa		32.9	■■■□□ 2.86
MRPL38-213	ENST00000493104	ADCY10	Q96PN6	1610 aa		32.87	■■■□□ 2.85
MRPL38-213	ENST00000493104	CARMIL2	Q6F5E8	1435 aa		32.83	■■■□□ 2.85
MRPL38-213	ENST00000493104	KIF13A	Q9H1H9	1805 aa		32.81	■■■□□ 2.84
MRPL38-213	ENST00000493104	PTPRG	P23470	1445 aa		32.8	■■■□□ 2.84
MRPL38-213	ENST00000493104	NPM1	P06748	294 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
MRPL38-213	ENST00000493104	TNIK	Q9UKE5	1360 aa		32.79	■■■□□ 2.84
MRPL38-213	ENST00000493104	MAPKBP1	O60336	1514 aa		32.78	■■■□□ 2.84
MRPL38-213	ENST00000493104	DISP1	Q96F81	1524 aa		32.75	■■■□□ 2.83
MRPL38-213	ENST00000493104	UGGT2	Q9NYU1	1516 aa		32.74	■■■□□ 2.83
MRPL38-213	ENST00000493104	ABCC10	Q5T3U5	1492 aa		32.71	■■■□□ 2.83
MRPL38-213	ENST00000493104	PRX	Q9BXM0	1461 aa		32.71	■■■□□ 2.83
MRPL38-213	ENST00000493104	CTTNBP2	Q8WZ74	1663 aa		32.65	■■■□□ 2.82
MRPL38-213	ENST00000493104	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.62	■■■□□ 2.81
MRPL38-213	ENST00000493104	FAM69C	Q0P6D2	419 aa		32.62	■■■□□ 2.81
MRPL38-213	ENST00000493104	DIP2B	Q9P265	1576 aa		32.62	■■■□□ 2.81
MRPL38-213	ENST00000493104	UHRF1BP1L	A0JNW5	1464 aa		32.61	■■■□□ 2.81
MRPL38-213	ENST00000493104	KIAA0556	O60303	1618 aa		32.6	■■■□□ 2.81
MRPL38-213	ENST00000493104	ABCC2	Q92887	1545 aa		32.6	■■■□□ 2.81
MRPL38-213	ENST00000493104	UACA	Q9BZF9	1416 aa		32.58	■■■□□ 2.81
MRPL38-213	ENST00000493104	CSRNP3	Q8WYN3	585 aa		32.51	■■■□□ 2.79
MRPL38-213	ENST00000493104	GOLGA3	Q08378	1498 aa		32.48	■■■□□ 2.79
MRPL38-213	ENST00000493104	KDM5B	Q9UGL1	1544 aa		32.46	■■■□□ 2.79
MRPL38-213	ENST00000493104	EEA1	Q15075	1411 aa		32.44	■■■□□ 2.78
MRPL38-213	ENST00000493104	ASXL2	Q76L83	1435 aa		32.44	■■■□□ 2.78
MRPL38-213	ENST00000493104	PLB1	Q6P1J6	1458 aa		32.43	■■■□□ 2.78
MRPL38-213	ENST00000493104	GLI2	P10070	1586 aa		32.36	■■■□□ 2.77
MRPL38-213	ENST00000493104	TSPOAP1	O95153	1857 aa		32.35	■■■□□ 2.77
MRPL38-213	ENST00000493104	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.35	■■■□□ 2.77
MRPL38-213	ENST00000493104	ABCA8	O94911	1581 aa		32.32	■■■□□ 2.76
MRPL38-213	ENST00000493104	EPRS	P07814	1512 aa	Known RBP	32.26	■■■□□ 2.76
MRPL38-213	ENST00000493104	PPRC1	Q5VV67	1664 aa	Known RBP	32.24	■■■□□ 2.75
MRPL38-213	ENST00000493104	KDM6B	O15054	1643 aa		32.22	■■■□□ 2.75
MRPL38-213	ENST00000493104	SAMD9	Q5K651	1589 aa		32.21	■■■□□ 2.75
MRPL38-213	ENST00000493104	CHIC1	Q5VXU3	224 aa		32.2	■■■□□ 2.75
MRPL38-213	ENST00000493104	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.19	■■■□□ 2.74
MRPL38-213	ENST00000493104	WDR7	Q9Y4E6	1490 aa		32.18	■■■□□ 2.74
MRPL38-213	ENST00000493104	MAP3K4	Q9Y6R4	1608 aa		32.18	■■■□□ 2.74
MRPL38-213	ENST00000493104	P3H3	Q8IVL6	736 aa		32.17	■■■□□ 2.74
MRPL38-213	ENST00000493104	KIF21B	O75037	1637 aa		32.15	■■■□□ 2.74
MRPL38-213	ENST00000493104	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.08	■■■□□ 2.73
MRPL38-213	ENST00000493104	ATP10B	O94823	1461 aa		32.04	■■■□□ 2.72
MRPL38-213	ENST00000493104	TEX14	Q8IWB6	1497 aa		32.03	■■■□□ 2.72
MRPL38-213	ENST00000493104	RAPGEF6	Q8TEU7	1601 aa		32	■■■□□ 2.71
MRPL38-213	ENST00000493104	KCNH8	Q96L42	1107 aa		31.99	■■■□□ 2.71
MRPL38-213	ENST00000493104	CFAP43	Q8NDM7	1665 aa		31.99	■■■□□ 2.71
MRPL38-213	ENST00000493104	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.98	■■■□□ 2.71
MRPL38-213	ENST00000493104	RANGAP1	P46060	587 aa	Predicted RBP	31.96	■■■□□ 2.71
MRPL38-213	ENST00000493104	FHOD3	Q2V2M9	1422 aa		31.95	■■■□□ 2.71
MRPL38-213	ENST00000493104	CD109	Q6YHK3	1445 aa		31.95	■■■□□ 2.71
MRPL38-213	ENST00000493104	MAGI3	Q5TCQ9	1506 aa		31.95	■■■□□ 2.7
MRPL38-213	ENST00000493104	EFCAB5	A4FU69	1503 aa		31.94	■■■□□ 2.7
MRPL38-213	ENST00000493104	ARID3C	A6NKF2	412 aa		31.93	■■■□□ 2.7
MRPL38-213	ENST00000493104	NUP153	P49790	1475 aa	Known RBP	31.9	■■■□□ 2.7
MRPL38-213	ENST00000493104	UBTF	P17480	764 aa	Known RBP	31.84	■■■□□ 2.69
MRPL38-213	ENST00000493104	ABCA9	Q8IUA7	1624 aa		31.82	■■■□□ 2.68
MRPL38-213	ENST00000493104	KDM4F	A0A1W2PPD8	638 aa		31.8	■■■□□ 2.68
MRPL38-213	ENST00000493104	EHMT2	Q96KQ7	1210 aa		31.78	■■■□□ 2.68
MRPL38-213	ENST00000493104	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.76	■■■□□ 2.67
MRPL38-213	ENST00000493104	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.76	■■■□□ 2.67
MRPL38-213	ENST00000493104	ARHGAP35	Q9NRY4	1499 aa		31.71	■■■□□ 2.67
MRPL38-213	ENST00000493104	ARAP3	Q8WWN8	1544 aa		31.7	■■■□□ 2.66
MRPL38-213	ENST00000493104	PLEKHD1	A6NEE1	506 aa		31.68	■■■□□ 2.66
MRPL38-213	ENST00000493104	PHLDB1	Q86UU1	1377 aa		31.68	■■■□□ 2.66
MRPL38-213	ENST00000493104	FMN1	Q68DA7	1419 aa		31.65	■■■□□ 2.66
MRPL38-213	ENST00000493104	NEO1	Q92859	1461 aa		31.6	■■■□□ 2.65
MRPL38-213	ENST00000493104	CDK13	Q14004	1512 aa	Known RBP	31.59	■■■□□ 2.65
MRPL38-213	ENST00000493104	ADGRL1	O94910	1474 aa		31.58	■■■□□ 2.65
MRPL38-213	ENST00000493104	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.54	■■■□□ 2.64
MRPL38-213	ENST00000493104	HECW1	Q76N89	1606 aa		31.54	■■■□□ 2.64
MRPL38-213	ENST00000493104	TTC37	Q6PGP7	1564 aa		31.48	■■■□□ 2.63
MRPL38-213	ENST00000493104	RAPGEF3	O95398	923 aa		31.46	■■■□□ 2.63
MRPL38-213	ENST00000493104	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.46	■■■□□ 2.63
MRPL38-213	ENST00000493104	FRMPD1	Q5SYB0	1578 aa		31.43	■■■□□ 2.62
MRPL38-213	ENST00000493104	FANCA	O15360	1455 aa		31.42	■■■□□ 2.62
MRPL38-213	ENST00000493104	AKNA	Q7Z591	1439 aa		31.41	■■■□□ 2.62
MRPL38-213	ENST00000493104	LRRIQ1	Q96JM4	1722 aa		31.41	■■■□□ 2.62
MRPL38-213	ENST00000493104	CFAP74	Q9C0B2	1584 aa		31.41	■■■□□ 2.62
MRPL38-213	ENST00000493104	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.4	■■■□□ 2.62
MRPL38-213	ENST00000493104	PLCH2	O75038	1416 aa		31.37	■■■□□ 2.61
MRPL38-213	ENST00000493104	DENND4B	O75064	1496 aa	Predicted RBP	31.36	■■■□□ 2.61
MRPL38-213	ENST00000493104	RICTOR	Q6R327	1708 aa		31.35	■■■□□ 2.61
MRPL38-213	ENST00000493104	CASKIN1	Q8WXD9	1431 aa		31.35	■■■□□ 2.61
MRPL38-213	ENST00000493104	TRO	Q12816	1431 aa	Predicted RBP	31.34	■■■□□ 2.61
MRPL38-213	ENST00000493104	PCF11	O94913	1555 aa	Known RBP	31.31	■■■□□ 2.6
MRPL38-213	ENST00000493104	KIF14	Q15058	1648 aa		31.3	■■■□□ 2.6
MRPL38-213	ENST00000493104	CLIP1	P30622	1438 aa		31.29	■■■□□ 2.6
MRPL38-213	ENST00000493104	MYO5C	Q9NQX4	1742 aa		31.28	■■■□□ 2.6
MRPL38-213	ENST00000493104	CCDC18	Q5T9S5	1454 aa		31.27	■■■□□ 2.6
MRPL38-213	ENST00000493104	ZMYM4	Q5VZL5	1548 aa		31.24	■■■□□ 2.59
MRPL38-213	ENST00000493104	FYCO1	Q9BQS8	1478 aa		31.23	■■■□□ 2.59
MRPL38-213	ENST00000493104	ARHGEF40	Q8TER5	1519 aa		31.23	■■■□□ 2.59
MRPL38-213	ENST00000493104	EFCAB2	Q5VUJ9	269 aa		31.22	■■■□□ 2.59
MRPL38-213	ENST00000493104	SCAPER	Q9BY12	1400 aa		31.21	■■■□□ 2.59
MRPL38-213	ENST00000493104	ADAMTSL3	P82987	1691 aa		31.2	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms