RNA–Protein interactions for RNA: ENST00000493104.5

MRPL38-213, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 1,116 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-213ENST00000493104 NISCHQ9Y2I1 1504 aa47.81■■■■■ 5.24
MRPL38-213ENST00000493104 CCDC180Q9P1Z9 1646 aa42.75■■■■■ 4.43
MRPL38-213ENST00000493104 ABCC9O60706 1549 aa42.31■■■■■ 4.36
MRPL38-213ENST00000493104 RB1CC1Q8TDY2 1594 aa40.48■■■■■ 4.07
MRPL38-213ENST00000493104 NACADO15069 1562 aa40.33■■■■■ 4.05
MRPL38-213ENST00000493104 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
MRPL38-213ENST00000493104 MYO15BQ96JP2 1530 aa39.95■■■■□ 3.99
MRPL38-213ENST00000493104 ZCCHC6Q5VYS8 1495 aaKnown RBP39.7■■■■□ 3.95
MRPL38-213ENST00000493104 UNC13AQ9UPW8 1703 aa39.61■■■■□ 3.93
MRPL38-213ENST00000493104 DCAF1Q9Y4B6 1507 aa39.56■■■■□ 3.92
MRPL38-213ENST00000493104 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
MRPL38-213ENST00000493104 DNAJC5BQ9UF47 199 aa39.43■■■■□ 3.9
MRPL38-213ENST00000493104 BICRAQ9NZM4 1560 aa39.33■■■■□ 3.89
MRPL38-213ENST00000493104 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
MRPL38-213ENST00000493104 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
MRPL38-213ENST00000493104 EIF4G1Q04637 1599 aaKnown RBP38.3■■■■□ 3.72
MRPL38-213ENST00000493104 CC2D2AQ9P2K1 1620 aa38.29■■■■□ 3.72
MRPL38-213ENST00000493104 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
MRPL38-213ENST00000493104 NCAPD3P42695 1498 aa37.25■■■■□ 3.55
MRPL38-213ENST00000493104 SMARCA4P51532 1647 aa37.2■■■■□ 3.55
MRPL38-213ENST00000493104 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
MRPL38-213ENST00000493104 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
MRPL38-213ENST00000493104 SMARCA2P51531 1590 aa37.06■■■■□ 3.52
MRPL38-213ENST00000493104 HMGXB3Q12766 1538 aa36.98■■■■□ 3.51
MRPL38-213ENST00000493104 PEG3Q9GZU2 1588 aa36.89■■■■□ 3.5
MRPL38-213ENST00000493104 MROH2BQ7Z745 1585 aa36.83■■■■□ 3.49
MRPL38-213ENST00000493104 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
MRPL38-213ENST00000493104 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
MRPL38-213ENST00000493104 NESP48681 1621 aa36.48■■■■□ 3.43
MRPL38-213ENST00000493104 WIZO95785 1651 aa36.39■■■■□ 3.42
MRPL38-213ENST00000493104 CUX2O14529 1486 aa36.37■■■■□ 3.41
MRPL38-213ENST00000493104 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.4
MRPL38-213ENST00000493104 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
MRPL38-213ENST00000493104 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
MRPL38-213ENST00000493104 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
MRPL38-213ENST00000493104 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
MRPL38-213ENST00000493104 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
MRPL38-213ENST00000493104 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
MRPL38-213ENST00000493104 DNAJC5Q9H3Z4 198 aa35.94■■■■□ 3.34
MRPL38-213ENST00000493104 CFTRP13569 1480 aa35.79■■■■□ 3.32
MRPL38-213ENST00000493104 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
MRPL38-213ENST00000493104 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
MRPL38-213ENST00000493104 WDR62O43379 1518 aa35.66■■■■□ 3.3
MRPL38-213ENST00000493104 CEP164Q9UPV0 1460 aa35.66■■■■□ 3.3
MRPL38-213ENST00000493104 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
MRPL38-213ENST00000493104 PRDM2Q13029 1718 aa35.46■■■■□ 3.27
MRPL38-213ENST00000493104 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
MRPL38-213ENST00000493104 TOPBP1Q92547 1522 aa35.05■■■■□ 3.2
MRPL38-213ENST00000493104 ABCC8Q09428 1581 aa35.02■■■■□ 3.2
MRPL38-213ENST00000493104 IFT140Q96RY7 1462 aa34.96■■■■□ 3.19
MRPL38-213ENST00000493104 DNMBPQ6XZF7 1577 aa34.95■■■■□ 3.18
MRPL38-213ENST00000493104 ZNF608Q9ULD9 1512 aaPredicted RBP34.86■■■■□ 3.17
MRPL38-213ENST00000493104 SUPT5HO00267 1087 aaKnown RBP34.8■■■■□ 3.16
MRPL38-213ENST00000493104 OSCARQ8IYS5 282 aa34.76■■■■□ 3.16
MRPL38-213ENST00000493104 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
MRPL38-213ENST00000493104 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
MRPL38-213ENST00000493104 EIF4G3O43432 1585 aaKnown RBP34.66■■■■□ 3.14
MRPL38-213ENST00000493104 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.131e-6■■□□□ 12
MRPL38-213ENST00000493104 CUX1P39880 1505 aa34.58■■■■□ 3.13
MRPL38-213ENST00000493104 RAD54L2Q9Y4B4 1467 aa34.56■■■■□ 3.12
MRPL38-213ENST00000493104 SOGA1O94964 1423 aa34.55■■■■□ 3.12
MRPL38-213ENST00000493104 FGD5Q6ZNL6 1462 aa34.52■■■■□ 3.12
MRPL38-213ENST00000493104 TDRD9Q8NDG6 1382 aaKnown RBP34.42■■■■□ 3.1
MRPL38-213ENST00000493104 WDR97A6NE52 1622 aa34.41■■■■□ 3.1
MRPL38-213ENST00000493104 TRIM41Q8WV44 630 aa34.4■■■■□ 3.1
MRPL38-213ENST00000493104 CHD1O14646 1710 aa34.35■■■■□ 3.09
MRPL38-213ENST00000493104 RIMBP3CA6NJZ7 1639 aa34.26■■■■□ 3.07
MRPL38-213ENST00000493104 RIMBP3BA6NNM3 1639 aa34.26■■■■□ 3.07
MRPL38-213ENST00000493104 RIMBP3Q9UFD9 1639 aa34.26■■■■□ 3.07
MRPL38-213ENST00000493104 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
MRPL38-213ENST00000493104 FBLN2P98095 1184 aa34.22■■■■□ 3.07
MRPL38-213ENST00000493104 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
MRPL38-213ENST00000493104 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.06
MRPL38-213ENST00000493104 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
MRPL38-213ENST00000493104 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
MRPL38-213ENST00000493104 TOP2BQ02880 1626 aa34.14■■■■□ 3.06
MRPL38-213ENST00000493104 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
MRPL38-213ENST00000493104 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
MRPL38-213ENST00000493104 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
MRPL38-213ENST00000493104 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
MRPL38-213ENST00000493104 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
MRPL38-213ENST00000493104 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
MRPL38-213ENST00000493104 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
MRPL38-213ENST00000493104 SYNJ2O15056 1496 aa34.06■■■■□ 3.04
MRPL38-213ENST00000493104 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
MRPL38-213ENST00000493104 CYB5RLQ6IPT4 315 aa33.89■■■■□ 3.02
MRPL38-213ENST00000493104 ARAP1Q96P48 1450 aa33.88■■■■□ 3.01
MRPL38-213ENST00000493104 ADAMTS12P58397 1594 aa33.79■■■■□ 3
MRPL38-213ENST00000493104 ERICH3Q5RHP9 1530 aa33.78■■■■□ 3
MRPL38-213ENST00000493104 GRIN2AQ12879 1464 aa33.77■■■■□ 3
MRPL38-213ENST00000493104 FHAD1B1AJZ9 1412 aa33.73■■■□□ 2.99
MRPL38-213ENST00000493104 NUP160Q12769 1436 aa33.68■■■□□ 2.98
MRPL38-213ENST00000493104 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
MRPL38-213ENST00000493104 SHROOM2Q13796 1616 aa33.49■■■□□ 2.95
MRPL38-213ENST00000493104 ERCC6L2Q5T890 1561 aa33.47■■■□□ 2.95
MRPL38-213ENST00000493104 KIF27Q86VH2 1401 aa33.45■■■□□ 2.95
MRPL38-213ENST00000493104 IGF1RP08069 1367 aa33.44■■■□□ 2.94
MRPL38-213ENST00000493104 TRHP20396 242 aaPredicted RBP33.34■■■□□ 2.93
MRPL38-213ENST00000493104 CUL7Q14999 1698 aa33.33■■■□□ 2.93
MRPL38-213ENST00000493104 JPH4Q96JJ6 628 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms