RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
CCM2-217ENST00000492883 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
CCM2-217ENST00000492883 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
CCM2-217ENST00000492883 KIAA0586Q9BVV6 1533 aa23.16■■□□□ 1.3
CCM2-217ENST00000492883 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
CCM2-217ENST00000492883 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
CCM2-217ENST00000492883 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
CCM2-217ENST00000492883 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
CCM2-217ENST00000492883 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
CCM2-217ENST00000492883 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
CCM2-217ENST00000492883 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
CCM2-217ENST00000492883 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
CCM2-217ENST00000492883 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
CCM2-217ENST00000492883 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
CCM2-217ENST00000492883 KIF21BO75037 1637 aa22.88■■□□□ 1.25
CCM2-217ENST00000492883 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
CCM2-217ENST00000492883 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
CCM2-217ENST00000492883 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
CCM2-217ENST00000492883 PTPRGP23470 1445 aa22.86■■□□□ 1.25
CCM2-217ENST00000492883 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
CCM2-217ENST00000492883 DISP1Q96F81 1524 aa22.83■■□□□ 1.25
CCM2-217ENST00000492883 CTTNBP2Q8WZ74 1663 aa22.82■■□□□ 1.24
CCM2-217ENST00000492883 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
CCM2-217ENST00000492883 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
CCM2-217ENST00000492883 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
CCM2-217ENST00000492883 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
CCM2-217ENST00000492883 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
CCM2-217ENST00000492883 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
CCM2-217ENST00000492883 FHOD3Q2V2M9 1422 aa22.6■■□□□ 1.21
CCM2-217ENST00000492883 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
CCM2-217ENST00000492883 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
CCM2-217ENST00000492883 UHRF1BP1LA0JNW5 1464 aa22.6■■□□□ 1.21
CCM2-217ENST00000492883 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
CCM2-217ENST00000492883 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
CCM2-217ENST00000492883 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
CCM2-217ENST00000492883 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
CCM2-217ENST00000492883 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
CCM2-217ENST00000492883 ABCA8O94911 1581 aa22.5■■□□□ 1.19
CCM2-217ENST00000492883 KDM5BQ9UGL1 1544 aa22.48■■□□□ 1.19
CCM2-217ENST00000492883 CLIP1P30622 1438 aa22.48■■□□□ 1.19
CCM2-217ENST00000492883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
CCM2-217ENST00000492883 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
CCM2-217ENST00000492883 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
CCM2-217ENST00000492883 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
CCM2-217ENST00000492883 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
CCM2-217ENST00000492883 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
CCM2-217ENST00000492883 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
CCM2-217ENST00000492883 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
CCM2-217ENST00000492883 ATP10BO94823 1461 aa22.4■■□□□ 1.18
CCM2-217ENST00000492883 RAPGEF6Q8TEU7 1601 aa22.39■■□□□ 1.18
CCM2-217ENST00000492883 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
CCM2-217ENST00000492883 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
CCM2-217ENST00000492883 ZCCHC11Q5TAX3 1644 aaKnown RBP22.37■■□□□ 1.17
CCM2-217ENST00000492883 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
CCM2-217ENST00000492883 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
CCM2-217ENST00000492883 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
CCM2-217ENST00000492883 EPRSP07814 1512 aaKnown RBP22.28■■□□□ 1.16
CCM2-217ENST00000492883 DIP2BQ9P265 1576 aa22.28■■□□□ 1.16
CCM2-217ENST00000492883 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
CCM2-217ENST00000492883 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
CCM2-217ENST00000492883 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
CCM2-217ENST00000492883 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
CCM2-217ENST00000492883 GLI2P10070 1586 aa22.21■■□□□ 1.15
CCM2-217ENST00000492883 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
CCM2-217ENST00000492883 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
CCM2-217ENST00000492883 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
CCM2-217ENST00000492883 CD109Q6YHK3 1445 aa22.16■■□□□ 1.14
CCM2-217ENST00000492883 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
CCM2-217ENST00000492883 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
CCM2-217ENST00000492883 TROQ12816 1431 aaPredicted RBP22.08■■□□□ 1.13
CCM2-217ENST00000492883 MAP3K4Q9Y6R4 1608 aa22.07■■□□□ 1.12
CCM2-217ENST00000492883 TEX14Q8IWB6 1497 aa22.07■■□□□ 1.12
CCM2-217ENST00000492883 MAGI3Q5TCQ9 1506 aa22.05■■□□□ 1.12
CCM2-217ENST00000492883 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
CCM2-217ENST00000492883 ABCA9Q8IUA7 1624 aa22.02■■□□□ 1.11
CCM2-217ENST00000492883 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
CCM2-217ENST00000492883 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
CCM2-217ENST00000492883 APLP2Q06481 763 aa22.01■■□□□ 1.11
CCM2-217ENST00000492883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
CCM2-217ENST00000492883 LRRIQ1Q96JM4 1722 aa22■■□□□ 1.11
CCM2-217ENST00000492883 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
CCM2-217ENST00000492883 PHLDB1Q86UU1 1377 aa21.95■■□□□ 1.1
CCM2-217ENST00000492883 PLCH2O75038 1416 aa21.95■■□□□ 1.1
CCM2-217ENST00000492883 KIF14Q15058 1648 aa21.95■■□□□ 1.1
CCM2-217ENST00000492883 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
CCM2-217ENST00000492883 KDM6BO15054 1643 aa21.93■■□□□ 1.1
CCM2-217ENST00000492883 TTC37Q6PGP7 1564 aa21.92■■□□□ 1.1
CCM2-217ENST00000492883 COL17A1Q9UMD9 1497 aaPredicted RBP21.91■■□□□ 1.1
CCM2-217ENST00000492883 FANCAO15360 1455 aa21.9■■□□□ 1.1
CCM2-217ENST00000492883 NEO1Q92859 1461 aa21.9■■□□□ 1.1
CCM2-217ENST00000492883 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
CCM2-217ENST00000492883 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
CCM2-217ENST00000492883 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
CCM2-217ENST00000492883 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
CCM2-217ENST00000492883 RAPGEF3O95398 923 aa21.86■■□□□ 1.09
CCM2-217ENST00000492883 MAP3K1Q13233 1512 aa21.85■■□□□ 1.09
CCM2-217ENST00000492883 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
CCM2-217ENST00000492883 ARAP3Q8WWN8 1544 aa21.85■■□□□ 1.09
CCM2-217ENST00000492883 CFDP1Q9UEE9 299 aaPredicted RBP21.84■■□□□ 1.09
CCM2-217ENST00000492883 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms