RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
SGMS1-204ENST00000492601 JPH4Q96JJ6 628 aa29.94■■■□□ 2.38
SGMS1-204ENST00000492601 KIAA0586Q9BVV6 1533 aa29.81■■■□□ 2.36
SGMS1-204ENST00000492601 CARMIL1Q5VZK9 1371 aa29.79■■■□□ 2.36
SGMS1-204ENST00000492601 KIF13AQ9H1H9 1805 aa29.68■■■□□ 2.34
SGMS1-204ENST00000492601 ADCY10Q96PN6 1610 aa29.63■■■□□ 2.33
SGMS1-204ENST00000492601 IQGAP2Q13576 1575 aa29.6■■■□□ 2.33
SGMS1-204ENST00000492601 NPM1P06748 294 aaKnown RBP eCLIP29.57■■■□□ 2.32
SGMS1-204ENST00000492601 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
SGMS1-204ENST00000492601 TTBK1Q5TCY1 1321 aaPredicted RBP29.54■■■□□ 2.32
SGMS1-204ENST00000492601 CARMIL2Q6F5E8 1435 aa29.52■■■□□ 2.32
SGMS1-204ENST00000492601 PTPRGP23470 1445 aa29.51■■■□□ 2.31
SGMS1-204ENST00000492601 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
SGMS1-204ENST00000492601 TNIKQ9UKE5 1360 aa29.47■■■□□ 2.31
SGMS1-204ENST00000492601 ABCC10Q5T3U5 1492 aa29.45■■■□□ 2.31
SGMS1-204ENST00000492601 FAM69CQ0P6D2 419 aa29.44■■■□□ 2.3
SGMS1-204ENST00000492601 DIP2BQ9P265 1576 aa29.43■■■□□ 2.3
SGMS1-204ENST00000492601 CTTNBP2Q8WZ74 1663 aa29.43■■■□□ 2.3
SGMS1-204ENST00000492601 DISP1Q96F81 1524 aa29.42■■■□□ 2.3
SGMS1-204ENST00000492601 UGGT2Q9NYU1 1516 aa29.39■■■□□ 2.3
SGMS1-204ENST00000492601 TSPOAP1O95153 1857 aa29.36■■■□□ 2.29
SGMS1-204ENST00000492601 KIAA0556O60303 1618 aa29.34■■■□□ 2.29
SGMS1-204ENST00000492601 ABCC2Q92887 1545 aa29.33■■■□□ 2.29
SGMS1-204ENST00000492601 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
SGMS1-204ENST00000492601 UACAQ9BZF9 1416 aa29.28■■■□□ 2.28
SGMS1-204ENST00000492601 UHRF1BP1LA0JNW5 1464 aa29.28■■■□□ 2.28
SGMS1-204ENST00000492601 ASXL2Q76L83 1435 aa29.21■■■□□ 2.27
SGMS1-204ENST00000492601 PLB1Q6P1J6 1458 aa29.18■■■□□ 2.26
SGMS1-204ENST00000492601 ZCCHC11Q5TAX3 1644 aaKnown RBP29.18■■■□□ 2.26
SGMS1-204ENST00000492601 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
SGMS1-204ENST00000492601 KDM5BQ9UGL1 1544 aa29.15■■■□□ 2.26
SGMS1-204ENST00000492601 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
SGMS1-204ENST00000492601 KDM6BO15054 1643 aa29.14■■■□□ 2.26
SGMS1-204ENST00000492601 GLI2P10070 1586 aa29.11■■■□□ 2.25
SGMS1-204ENST00000492601 CSRNP3Q8WYN3 585 aa29.11■■■□□ 2.25
SGMS1-204ENST00000492601 PPRC1Q5VV67 1664 aaKnown RBP29.09■■■□□ 2.25
SGMS1-204ENST00000492601 ABCA8O94911 1581 aa29.05■■■□□ 2.24
SGMS1-204ENST00000492601 EPRSP07814 1512 aaKnown RBP29.04■■■□□ 2.24
SGMS1-204ENST00000492601 MAP3K4Q9Y6R4 1608 aa29■■■□□ 2.23
SGMS1-204ENST00000492601 EEA1Q15075 1411 aa29■■■□□ 2.23
SGMS1-204ENST00000492601 P3H3Q8IVL6 736 aa28.99■■■□□ 2.23
SGMS1-204ENST00000492601 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
SGMS1-204ENST00000492601 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
SGMS1-204ENST00000492601 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
SGMS1-204ENST00000492601 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
SGMS1-204ENST00000492601 ARID3CA6NKF2 412 aa28.86■■■□□ 2.21
SGMS1-204ENST00000492601 KCNH8Q96L42 1107 aa28.86■■■□□ 2.21
SGMS1-204ENST00000492601 TEX14Q8IWB6 1497 aa28.85■■■□□ 2.21
SGMS1-204ENST00000492601 KIF21BO75037 1637 aa28.83■■■□□ 2.21
SGMS1-204ENST00000492601 CFAP43Q8NDM7 1665 aa28.83■■■□□ 2.21
SGMS1-204ENST00000492601 RAPGEF6Q8TEU7 1601 aa28.81■■■□□ 2.2
SGMS1-204ENST00000492601 COL17A1Q9UMD9 1497 aaPredicted RBP28.81■■■□□ 2.2
SGMS1-204ENST00000492601 ATP10BO94823 1461 aa28.78■■■□□ 2.2
SGMS1-204ENST00000492601 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
SGMS1-204ENST00000492601 CD109Q6YHK3 1445 aa28.77■■■□□ 2.2
SGMS1-204ENST00000492601 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
SGMS1-204ENST00000492601 MAGI3Q5TCQ9 1506 aa28.71■■■□□ 2.19
SGMS1-204ENST00000492601 KDM4FA0A1W2PPD8 638 aa28.71■■■□□ 2.19
SGMS1-204ENST00000492601 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
SGMS1-204ENST00000492601 EFCAB5A4FU69 1503 aa28.66■■■□□ 2.18
SGMS1-204ENST00000492601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.66■■■□□ 2.18
SGMS1-204ENST00000492601 HNRNPUL2Q1KMD3 747 aaKnown RBP28.66■■■□□ 2.18
SGMS1-204ENST00000492601 NUP153P49790 1475 aaKnown RBP28.66■■■□□ 2.18
SGMS1-204ENST00000492601 ABCA9Q8IUA7 1624 aa28.63■■■□□ 2.17
SGMS1-204ENST00000492601 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
SGMS1-204ENST00000492601 ADGRL1O94910 1474 aa28.56■■■□□ 2.16
SGMS1-204ENST00000492601 ARAP3Q8WWN8 1544 aa28.49■■■□□ 2.15
SGMS1-204ENST00000492601 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
SGMS1-204ENST00000492601 ARHGAP35Q9NRY4 1499 aa28.44■■■□□ 2.14
SGMS1-204ENST00000492601 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
SGMS1-204ENST00000492601 NEO1Q92859 1461 aa28.41■■■□□ 2.14
SGMS1-204ENST00000492601 PHLDB1Q86UU1 1377 aa28.41■■■□□ 2.14
SGMS1-204ENST00000492601 ATP1B4Q9UN42 357 aaPredicted RBP28.39■■■□□ 2.14
SGMS1-204ENST00000492601 HECW1Q76N89 1606 aa28.38■■■□□ 2.13
SGMS1-204ENST00000492601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.38■■■□□ 2.137e-9■■■□□ 17.9
SGMS1-204ENST00000492601 FMN1Q68DA7 1419 aa28.37■■■□□ 2.13
SGMS1-204ENST00000492601 TTC37Q6PGP7 1564 aa28.37■■■□□ 2.13
SGMS1-204ENST00000492601 RAPGEF3O95398 923 aa28.36■■■□□ 2.13
SGMS1-204ENST00000492601 FRMPD1Q5SYB0 1578 aa28.33■■■□□ 2.12
SGMS1-204ENST00000492601 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
SGMS1-204ENST00000492601 CFAP74Q9C0B2 1584 aa28.3■■■□□ 2.12
SGMS1-204ENST00000492601 FANCAO15360 1455 aa28.28■■■□□ 2.12
SGMS1-204ENST00000492601 RICTORQ6R327 1708 aa28.27■■■□□ 2.12
SGMS1-204ENST00000492601 AKNAQ7Z591 1439 aa28.26■■■□□ 2.11
SGMS1-204ENST00000492601 DENND4BO75064 1496 aaPredicted RBP28.22■■■□□ 2.11
SGMS1-204ENST00000492601 MYO5CQ9NQX4 1742 aa28.22■■■□□ 2.11
SGMS1-204ENST00000492601 KIF14Q15058 1648 aa28.2■■■□□ 2.1
SGMS1-204ENST00000492601 CDK11AQ9UQ88 783 aaPredicted RBP28.19■■■□□ 2.1
SGMS1-204ENST00000492601 PCF11O94913 1555 aaKnown RBP28.18■■■□□ 2.1
SGMS1-204ENST00000492601 PLCH2O75038 1416 aa28.16■■■□□ 2.1
SGMS1-204ENST00000492601 ARHGEF40Q8TER5 1519 aa28.15■■■□□ 2.1
SGMS1-204ENST00000492601 ADAMTSL3P82987 1691 aa28.14■■■□□ 2.1
SGMS1-204ENST00000492601 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
SGMS1-204ENST00000492601 BCORL1Q5H9F3 1711 aa28.12■■■□□ 2.09
SGMS1-204ENST00000492601 HECW2Q9P2P5 1572 aa28.12■■■□□ 2.09
SGMS1-204ENST00000492601 ARID4BQ4LE39 1312 aaPredicted RBP28.11■■■□□ 2.09
SGMS1-204ENST00000492601 CASKIN1Q8WXD9 1431 aa28.1■■■□□ 2.09
SGMS1-204ENST00000492601 ZMYM4Q5VZL5 1548 aa28.1■■■□□ 2.09
SGMS1-204ENST00000492601 CLIP1P30622 1438 aa28.09■■■□□ 2.09
SGMS1-204ENST00000492601 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms