RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PRG4Q92954 1404 aaPredicted RBP19.29■□□□□ 0.68
TMEM39A-211ENST00000491685 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
TMEM39A-211ENST00000491685 IGF1RP08069 1367 aa19.24■□□□□ 0.67
TMEM39A-211ENST00000491685 JPH4Q96JJ6 628 aa19.22■□□□□ 0.67
TMEM39A-211ENST00000491685 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
TMEM39A-211ENST00000491685 ADCY10Q96PN6 1610 aa19.18■□□□□ 0.66
TMEM39A-211ENST00000491685 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
TMEM39A-211ENST00000491685 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
TMEM39A-211ENST00000491685 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
TMEM39A-211ENST00000491685 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
TMEM39A-211ENST00000491685 ABCC10Q5T3U5 1492 aa19.05■□□□□ 0.64
TMEM39A-211ENST00000491685 KDM6BO15054 1643 aa18.98■□□□□ 0.63
TMEM39A-211ENST00000491685 DISP1Q96F81 1524 aa18.98■□□□□ 0.63
TMEM39A-211ENST00000491685 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
TMEM39A-211ENST00000491685 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
TMEM39A-211ENST00000491685 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
TMEM39A-211ENST00000491685 PTPRGP23470 1445 aa18.96■□□□□ 0.63
TMEM39A-211ENST00000491685 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
TMEM39A-211ENST00000491685 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
TMEM39A-211ENST00000491685 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
TMEM39A-211ENST00000491685 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
TMEM39A-211ENST00000491685 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
TMEM39A-211ENST00000491685 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
TMEM39A-211ENST00000491685 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
TMEM39A-211ENST00000491685 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
TMEM39A-211ENST00000491685 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
TMEM39A-211ENST00000491685 UHRF1BP1LA0JNW5 1464 aa18.87■□□□□ 0.61
TMEM39A-211ENST00000491685 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
TMEM39A-211ENST00000491685 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
TMEM39A-211ENST00000491685 UACAQ9BZF9 1416 aa18.84■□□□□ 0.61
TMEM39A-211ENST00000491685 ASXL2Q76L83 1435 aa18.83■□□□□ 0.6
TMEM39A-211ENST00000491685 PRXQ9BXM0 1461 aa18.82■□□□□ 0.6
TMEM39A-211ENST00000491685 GLI2P10070 1586 aa18.81■□□□□ 0.6
TMEM39A-211ENST00000491685 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
TMEM39A-211ENST00000491685 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
TMEM39A-211ENST00000491685 MAP3K4Q9Y6R4 1608 aa18.77■□□□□ 0.6
TMEM39A-211ENST00000491685 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
TMEM39A-211ENST00000491685 ABCA8O94911 1581 aa18.74■□□□□ 0.59
TMEM39A-211ENST00000491685 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
TMEM39A-211ENST00000491685 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
TMEM39A-211ENST00000491685 ADGRL1O94910 1474 aa18.69■□□□□ 0.58
TMEM39A-211ENST00000491685 WDR7Q9Y4E6 1490 aa18.66■□□□□ 0.58
TMEM39A-211ENST00000491685 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
TMEM39A-211ENST00000491685 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
TMEM39A-211ENST00000491685 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
TMEM39A-211ENST00000491685 HECW2Q9P2P5 1572 aa18.61■□□□□ 0.57
TMEM39A-211ENST00000491685 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.57
TMEM39A-211ENST00000491685 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
TMEM39A-211ENST00000491685 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
TMEM39A-211ENST00000491685 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
TMEM39A-211ENST00000491685 EEA1Q15075 1411 aa18.54■□□□□ 0.56
TMEM39A-211ENST00000491685 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
TMEM39A-211ENST00000491685 KIF21BO75037 1637 aa18.52■□□□□ 0.56
TMEM39A-211ENST00000491685 ATP10BO94823 1461 aa18.52■□□□□ 0.56
TMEM39A-211ENST00000491685 MAGI3Q5TCQ9 1506 aa18.52■□□□□ 0.56
TMEM39A-211ENST00000491685 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
TMEM39A-211ENST00000491685 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
TMEM39A-211ENST00000491685 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
TMEM39A-211ENST00000491685 ABCA9Q8IUA7 1624 aa18.48■□□□□ 0.55
TMEM39A-211ENST00000491685 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
TMEM39A-211ENST00000491685 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.55
TMEM39A-211ENST00000491685 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
TMEM39A-211ENST00000491685 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
TMEM39A-211ENST00000491685 ARAP3Q8WWN8 1544 aa18.38■□□□□ 0.53
TMEM39A-211ENST00000491685 FRMPD1Q5SYB0 1578 aa18.35■□□□□ 0.53
TMEM39A-211ENST00000491685 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
TMEM39A-211ENST00000491685 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
TMEM39A-211ENST00000491685 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
TMEM39A-211ENST00000491685 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
TMEM39A-211ENST00000491685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
TMEM39A-211ENST00000491685 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
TMEM39A-211ENST00000491685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.29■□□□□ 0.523e-7■□□□□ 11.1
TMEM39A-211ENST00000491685 NEO1Q92859 1461 aa18.29■□□□□ 0.52
TMEM39A-211ENST00000491685 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
TMEM39A-211ENST00000491685 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
TMEM39A-211ENST00000491685 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.52
TMEM39A-211ENST00000491685 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
TMEM39A-211ENST00000491685 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
TMEM39A-211ENST00000491685 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
TMEM39A-211ENST00000491685 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
TMEM39A-211ENST00000491685 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
TMEM39A-211ENST00000491685 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
TMEM39A-211ENST00000491685 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
TMEM39A-211ENST00000491685 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
TMEM39A-211ENST00000491685 KIF14Q15058 1648 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 BCORL1Q5H9F3 1711 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 FANCAO15360 1455 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 PTPRMP28827 1452 aa18.2■□□□□ 0.5
TMEM39A-211ENST00000491685 MYO5CQ9NQX4 1742 aa18.18■□□□□ 0.5
TMEM39A-211ENST00000491685 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
TMEM39A-211ENST00000491685 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
TMEM39A-211ENST00000491685 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
TMEM39A-211ENST00000491685 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
TMEM39A-211ENST00000491685 ZMYM4Q5VZL5 1548 aa18.15■□□□□ 0.5
TMEM39A-211ENST00000491685 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
TMEM39A-211ENST00000491685 RIMS1Q86UR5 1692 aaKnown RBP18.11■□□□□ 0.49
TMEM39A-211ENST00000491685 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
TMEM39A-211ENST00000491685 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms