RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
SNAPC3-206ENST00000490969 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
SNAPC3-206ENST00000490969 APLP2Q06481 763 aa28.16■■■□□ 2.1
SNAPC3-206ENST00000490969 WDR97A6NE52 1622 aa28.15■■■□□ 2.1
SNAPC3-206ENST00000490969 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
SNAPC3-206ENST00000490969 TSHZ2Q9NRE2 1034 aa28.09■■■□□ 2.09
SNAPC3-206ENST00000490969 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
SNAPC3-206ENST00000490969 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
SNAPC3-206ENST00000490969 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
SNAPC3-206ENST00000490969 ANP32EQ9BTT0 268 aa28.01■■■□□ 2.08
SNAPC3-206ENST00000490969 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.08
SNAPC3-206ENST00000490969 WDR62O43379 1518 aa28■■■□□ 2.07
SNAPC3-206ENST00000490969 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.071e-7■■□□□ 13.1
SNAPC3-206ENST00000490969 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
SNAPC3-206ENST00000490969 THOC2Q8NI27 1593 aaKnown RBP27.93■■■□□ 2.06
SNAPC3-206ENST00000490969 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
SNAPC3-206ENST00000490969 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
SNAPC3-206ENST00000490969 CUL7Q14999 1698 aa27.87■■■□□ 2.05
SNAPC3-206ENST00000490969 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
SNAPC3-206ENST00000490969 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
SNAPC3-206ENST00000490969 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
SNAPC3-206ENST00000490969 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
SNAPC3-206ENST00000490969 KANK4Q5T7N3 995 aaPredicted RBP27.7■■■□□ 2.02
SNAPC3-206ENST00000490969 KCNH8Q96L42 1107 aa27.7■■■□□ 2.02
SNAPC3-206ENST00000490969 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
SNAPC3-206ENST00000490969 BCL11AQ9H165 835 aa27.69■■■□□ 2.02
SNAPC3-206ENST00000490969 EIF4G3O43432 1585 aaKnown RBP27.68■■■□□ 2.02
SNAPC3-206ENST00000490969 CTTNBP2Q8WZ74 1663 aa27.67■■■□□ 2.02
SNAPC3-206ENST00000490969 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
SNAPC3-206ENST00000490969 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
SNAPC3-206ENST00000490969 BCANQ96GW7 911 aa27.64■■■□□ 2.01
SNAPC3-206ENST00000490969 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
SNAPC3-206ENST00000490969 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
SNAPC3-206ENST00000490969 FKBP8Q14318 412 aa27.59■■■□□ 2.01
SNAPC3-206ENST00000490969 CCNB3Q8WWL7 1395 aa27.56■■■□□ 2
SNAPC3-206ENST00000490969 MAPKBP1O60336 1514 aa27.49■■□□□ 1.99
SNAPC3-206ENST00000490969 RBM19Q9Y4C8 960 aaKnown RBP27.45■■□□□ 1.98
SNAPC3-206ENST00000490969 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.98
SNAPC3-206ENST00000490969 FBLN2P98095 1184 aa27.44■■□□□ 1.98
SNAPC3-206ENST00000490969 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
SNAPC3-206ENST00000490969 RAB3GAP2Q9H2M9 1393 aa27.44■■□□□ 1.98
SNAPC3-206ENST00000490969 PCF11O94913 1555 aaKnown RBP27.44■■□□□ 1.98
SNAPC3-206ENST00000490969 ITGAEP38570 1179 aa27.43■■□□□ 1.98
SNAPC3-206ENST00000490969 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
SNAPC3-206ENST00000490969 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
SNAPC3-206ENST00000490969 NEFLP07196 543 aa27.41■■□□□ 1.98
SNAPC3-206ENST00000490969 DDX10Q13206 875 aaKnown RBP27.41■■□□□ 1.98
SNAPC3-206ENST00000490969 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.97
SNAPC3-206ENST00000490969 IQGAP2Q13576 1575 aa27.39■■□□□ 1.97
SNAPC3-206ENST00000490969 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
SNAPC3-206ENST00000490969 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
SNAPC3-206ENST00000490969 TIAM1Q13009 1591 aa27.33■■□□□ 1.97
SNAPC3-206ENST00000490969 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
SNAPC3-206ENST00000490969 CEP170Q5SW79 1584 aa27.3■■□□□ 1.96
SNAPC3-206ENST00000490969 CASKIN1Q8WXD9 1431 aa27.29■■□□□ 1.96
SNAPC3-206ENST00000490969 KIAA0586Q9BVV6 1533 aa27.28■■□□□ 1.96
SNAPC3-206ENST00000490969 SETD5Q9C0A6 1442 aa27.28■■□□□ 1.96
SNAPC3-206ENST00000490969 CCER2I3L3R5 266 aa27.27■■□□□ 1.96
SNAPC3-206ENST00000490969 FMN1Q68DA7 1419 aa27.26■■□□□ 1.95
SNAPC3-206ENST00000490969 FYCO1Q9BQS8 1478 aa27.25■■□□□ 1.95
SNAPC3-206ENST00000490969 TRIM52Q96A61 297 aa27.24■■□□□ 1.95
SNAPC3-206ENST00000490969 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
SNAPC3-206ENST00000490969 LRRIQ1Q96JM4 1722 aa27.23■■□□□ 1.95
SNAPC3-206ENST00000490969 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
SNAPC3-206ENST00000490969 UGGT2Q9NYU1 1516 aa27.23■■□□□ 1.95
SNAPC3-206ENST00000490969 MAP3K1Q13233 1512 aa27.22■■□□□ 1.95
SNAPC3-206ENST00000490969 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
SNAPC3-206ENST00000490969 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.95
SNAPC3-206ENST00000490969 ANP32CO43423 234 aa27.18■■□□□ 1.94
SNAPC3-206ENST00000490969 NUP160Q12769 1436 aa27.17■■□□□ 1.94
SNAPC3-206ENST00000490969 TIMELESSQ9UNS1 1208 aa27.17■■□□□ 1.94
SNAPC3-206ENST00000490969 ARID3CA6NKF2 412 aa27.16■■□□□ 1.94
SNAPC3-206ENST00000490969 MSH5O43196 834 aa27.16■■□□□ 1.94
SNAPC3-206ENST00000490969 PHLDB1Q86UU1 1377 aa27.13■■□□□ 1.93
SNAPC3-206ENST00000490969 KIAA0556O60303 1618 aa27.12■■□□□ 1.93
SNAPC3-206ENST00000490969 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
SNAPC3-206ENST00000490969 HIRIP3Q9BW71 556 aaPredicted RBP27.11■■□□□ 1.93
SNAPC3-206ENST00000490969 CHD1O14646 1710 aa27.07■■□□□ 1.92
SNAPC3-206ENST00000490969 FANCIQ9NVI1 1328 aa27.05■■□□□ 1.92
SNAPC3-206ENST00000490969 MAGI3Q5TCQ9 1506 aa27.02■■□□□ 1.92
SNAPC3-206ENST00000490969 FAM50AQ14320 339 aaKnown RBP27.02■■□□□ 1.92
SNAPC3-206ENST00000490969 CDK13Q14004 1512 aaKnown RBP27.01■■□□□ 1.92
SNAPC3-206ENST00000490969 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
SNAPC3-206ENST00000490969 EPRSP07814 1512 aaKnown RBP26.97■■□□□ 1.91
SNAPC3-206ENST00000490969 CDK11AQ9UQ88 783 aaPredicted RBP26.95■■□□□ 1.9
SNAPC3-206ENST00000490969 HECW1Q76N89 1606 aa26.95■■□□□ 1.9
SNAPC3-206ENST00000490969 PLB1Q6P1J6 1458 aa26.94■■□□□ 1.9
SNAPC3-206ENST00000490969 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
SNAPC3-206ENST00000490969 ERICH6Q7L0X2 663 aa26.91■■□□□ 1.9
SNAPC3-206ENST00000490969 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
SNAPC3-206ENST00000490969 NCOA2Q15596 1464 aa26.88■■□□□ 1.89
SNAPC3-206ENST00000490969 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
SNAPC3-206ENST00000490969 CCDC18Q5T9S5 1454 aa26.87■■□□□ 1.89
SNAPC3-206ENST00000490969 RAPGEF6Q8TEU7 1601 aa26.87■■□□□ 1.89
SNAPC3-206ENST00000490969 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
SNAPC3-206ENST00000490969 HNRNPUQ00839 825 aaKnown RBP eCLIP26.86■■□□□ 1.89
SNAPC3-206ENST00000490969 IRX6P78412 446 aaPredicted RBP26.85■■□□□ 1.89
SNAPC3-206ENST00000490969 EHBP1L1Q8N3D4 1523 aa26.83■■□□□ 1.89
SNAPC3-206ENST00000490969 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
SNAPC3-206ENST00000490969 FGD6Q6ZV73 1430 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 984.3 ms