RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
SFXN4-208ENST00000490417 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
SFXN4-208ENST00000490417 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
SFXN4-208ENST00000490417 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
SFXN4-208ENST00000490417 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
SFXN4-208ENST00000490417 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
SFXN4-208ENST00000490417 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
SFXN4-208ENST00000490417 NUP160Q12769 1436 aa23.12■■□□□ 1.29
SFXN4-208ENST00000490417 IGF1RP08069 1367 aa23.1■■□□□ 1.29
SFXN4-208ENST00000490417 ARAP1Q96P48 1450 aa23.08■■□□□ 1.29
SFXN4-208ENST00000490417 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
SFXN4-208ENST00000490417 NPM3O75607 178 aaKnown RBP23.06■■□□□ 1.28
SFXN4-208ENST00000490417 CUL7Q14999 1698 aa23.04■■□□□ 1.28
SFXN4-208ENST00000490417 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
SFXN4-208ENST00000490417 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
SFXN4-208ENST00000490417 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
SFXN4-208ENST00000490417 SHROOM2Q13796 1616 aa22.92■■□□□ 1.26
SFXN4-208ENST00000490417 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
SFXN4-208ENST00000490417 PRG4Q92954 1404 aaPredicted RBP22.91■■□□□ 1.26
SFXN4-208ENST00000490417 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
SFXN4-208ENST00000490417 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
SFXN4-208ENST00000490417 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
SFXN4-208ENST00000490417 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
SFXN4-208ENST00000490417 CARMIL2Q6F5E8 1435 aa22.77■■□□□ 1.24
SFXN4-208ENST00000490417 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
SFXN4-208ENST00000490417 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
SFXN4-208ENST00000490417 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
SFXN4-208ENST00000490417 EEA1Q15075 1411 aa22.69■■□□□ 1.22
SFXN4-208ENST00000490417 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
SFXN4-208ENST00000490417 PTPRGP23470 1445 aa22.65■■□□□ 1.22
SFXN4-208ENST00000490417 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
SFXN4-208ENST00000490417 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
SFXN4-208ENST00000490417 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
SFXN4-208ENST00000490417 HOXD11P31277 338 aaPredicted RBP22.61■■□□□ 1.21
SFXN4-208ENST00000490417 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
SFXN4-208ENST00000490417 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
SFXN4-208ENST00000490417 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
SFXN4-208ENST00000490417 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
SFXN4-208ENST00000490417 DISP1Q96F81 1524 aa22.52■■□□□ 1.19
SFXN4-208ENST00000490417 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
SFXN4-208ENST00000490417 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
SFXN4-208ENST00000490417 UACAQ9BZF9 1416 aa22.48■■□□□ 1.19
SFXN4-208ENST00000490417 MAPKBP1O60336 1514 aa22.47■■□□□ 1.19
SFXN4-208ENST00000490417 KIAA0556O60303 1618 aa22.46■■□□□ 1.19
SFXN4-208ENST00000490417 UHRF1BP1LA0JNW5 1464 aa22.45■■□□□ 1.18
SFXN4-208ENST00000490417 FAM69CQ0P6D2 419 aa22.44■■□□□ 1.18
SFXN4-208ENST00000490417 ABCC2Q92887 1545 aa22.43■■□□□ 1.18
SFXN4-208ENST00000490417 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
SFXN4-208ENST00000490417 PLB1Q6P1J6 1458 aa22.36■■□□□ 1.17
SFXN4-208ENST00000490417 KIF21BO75037 1637 aa22.34■■□□□ 1.17
SFXN4-208ENST00000490417 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
SFXN4-208ENST00000490417 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
SFXN4-208ENST00000490417 ASXL2Q76L83 1435 aa22.31■■□□□ 1.16
SFXN4-208ENST00000490417 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
SFXN4-208ENST00000490417 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
SFXN4-208ENST00000490417 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
SFXN4-208ENST00000490417 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
SFXN4-208ENST00000490417 POTEDQ86YR6 584 aa22.28■■□□□ 1.16
SFXN4-208ENST00000490417 SAMD9Q5K651 1589 aa22.23■■□□□ 1.15
SFXN4-208ENST00000490417 ABCA8O94911 1581 aa22.22■■□□□ 1.15
SFXN4-208ENST00000490417 DCAF8L1A6NGE4 600 aa22.22■■□□□ 1.15
SFXN4-208ENST00000490417 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.15
SFXN4-208ENST00000490417 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
SFXN4-208ENST00000490417 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
SFXN4-208ENST00000490417 GLI2P10070 1586 aa22.18■■□□□ 1.14
SFXN4-208ENST00000490417 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
SFXN4-208ENST00000490417 EPRSP07814 1512 aaKnown RBP22.16■■□□□ 1.14
SFXN4-208ENST00000490417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
SFXN4-208ENST00000490417 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
SFXN4-208ENST00000490417 FHOD3Q2V2M9 1422 aa22.13■■□□□ 1.13
SFXN4-208ENST00000490417 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
SFXN4-208ENST00000490417 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
SFXN4-208ENST00000490417 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
SFXN4-208ENST00000490417 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
SFXN4-208ENST00000490417 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
SFXN4-208ENST00000490417 ATP10BO94823 1461 aa22.08■■□□□ 1.12
SFXN4-208ENST00000490417 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
SFXN4-208ENST00000490417 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
SFXN4-208ENST00000490417 KDM6BO15054 1643 aa22.04■■□□□ 1.12
SFXN4-208ENST00000490417 CD109Q6YHK3 1445 aa22.03■■□□□ 1.12
SFXN4-208ENST00000490417 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.11
SFXN4-208ENST00000490417 NUP153P49790 1475 aaKnown RBP21.99■■□□□ 1.11
SFXN4-208ENST00000490417 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
SFXN4-208ENST00000490417 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
SFXN4-208ENST00000490417 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
SFXN4-208ENST00000490417 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
SFXN4-208ENST00000490417 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SFXN4-208ENST00000490417 PPRC1Q5VV67 1664 aaKnown RBP21.92■■□□□ 1.1
SFXN4-208ENST00000490417 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
SFXN4-208ENST00000490417 HECW1Q76N89 1606 aa21.89■■□□□ 1.09
SFXN4-208ENST00000490417 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
SFXN4-208ENST00000490417 CLIP1P30622 1438 aa21.86■■□□□ 1.09
SFXN4-208ENST00000490417 NEO1Q92859 1461 aa21.8■■□□□ 1.08
SFXN4-208ENST00000490417 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
SFXN4-208ENST00000490417 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
SFXN4-208ENST00000490417 COL17A1Q9UMD9 1497 aaPredicted RBP21.78■■□□□ 1.08
SFXN4-208ENST00000490417 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.08
SFXN4-208ENST00000490417 ARAP3Q8WWN8 1544 aa21.77■■□□□ 1.08
SFXN4-208ENST00000490417 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
SFXN4-208ENST00000490417 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms