RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PRG4Q92954 1404 aaPredicted RBP33.9■■■■□ 3.02
TNFRSF1B-202ENST00000489921 CUL7Q14999 1698 aa33.85■■■■□ 3.01
TNFRSF1B-202ENST00000489921 KIAA0586Q9BVV6 1533 aa33.76■■■■□ 3
TNFRSF1B-202ENST00000489921 CARMIL1Q5VZK9 1371 aa33.71■■■□□ 2.99
TNFRSF1B-202ENST00000489921 KIF13AQ9H1H9 1805 aa33.56■■■□□ 2.96
TNFRSF1B-202ENST00000489921 ADCY10Q96PN6 1610 aa33.55■■■□□ 2.96
TNFRSF1B-202ENST00000489921 IQGAP2Q13576 1575 aa33.45■■■□□ 2.95
TNFRSF1B-202ENST00000489921 MAPKBP1O60336 1514 aa33.43■■■□□ 2.94
TNFRSF1B-202ENST00000489921 RAPGEF2Q9Y4G8 1499 aa33.41■■■□□ 2.94
TNFRSF1B-202ENST00000489921 ABCC10Q5T3U5 1492 aa33.38■■■□□ 2.93
TNFRSF1B-202ENST00000489921 PTPRGP23470 1445 aa33.38■■■□□ 2.93
TNFRSF1B-202ENST00000489921 NPM1P06748 294 aaKnown RBP eCLIP33.38■■■□□ 2.93
TNFRSF1B-202ENST00000489921 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
TNFRSF1B-202ENST00000489921 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
TNFRSF1B-202ENST00000489921 DISP1Q96F81 1524 aa33.33■■■□□ 2.93
TNFRSF1B-202ENST00000489921 DIP2BQ9P265 1576 aa33.32■■■□□ 2.92
TNFRSF1B-202ENST00000489921 FAM69CQ0P6D2 419 aa33.3■■■□□ 2.92
TNFRSF1B-202ENST00000489921 UGGT2Q9NYU1 1516 aa33.28■■■□□ 2.92
TNFRSF1B-202ENST00000489921 TTBK1Q5TCY1 1321 aaPredicted RBP33.27■■■□□ 2.92
TNFRSF1B-202ENST00000489921 ABCC2Q92887 1545 aa33.21■■■□□ 2.91
TNFRSF1B-202ENST00000489921 UHRF1BP1LA0JNW5 1464 aa33.18■■■□□ 2.9
TNFRSF1B-202ENST00000489921 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
TNFRSF1B-202ENST00000489921 CTTNBP2Q8WZ74 1663 aa33.17■■■□□ 2.9
TNFRSF1B-202ENST00000489921 KIAA0556O60303 1618 aa33.16■■■□□ 2.9
TNFRSF1B-202ENST00000489921 UACAQ9BZF9 1416 aa33.15■■■□□ 2.9
TNFRSF1B-202ENST00000489921 TSPOAP1O95153 1857 aa33.08■■■□□ 2.89
TNFRSF1B-202ENST00000489921 ASXL2Q76L83 1435 aa33.07■■■□□ 2.88
TNFRSF1B-202ENST00000489921 KDM5BQ9UGL1 1544 aa33.05■■■□□ 2.88
TNFRSF1B-202ENST00000489921 PLB1Q6P1J6 1458 aa33.02■■■□□ 2.88
TNFRSF1B-202ENST00000489921 GLI2P10070 1586 aa32.99■■■□□ 2.87
TNFRSF1B-202ENST00000489921 ZCCHC11Q5TAX3 1644 aaKnown RBP32.98■■■□□ 2.87
TNFRSF1B-202ENST00000489921 PPRC1Q5VV67 1664 aaKnown RBP32.95■■■□□ 2.87
TNFRSF1B-202ENST00000489921 GOLGA3Q08378 1498 aa32.94■■■□□ 2.86
TNFRSF1B-202ENST00000489921 KDM6BO15054 1643 aa32.93■■■□□ 2.86
TNFRSF1B-202ENST00000489921 AEBP2Q6ZN18 517 aaPredicted RBP32.93■■■□□ 2.86
TNFRSF1B-202ENST00000489921 CSRNP3Q8WYN3 585 aa32.9■■■□□ 2.86
TNFRSF1B-202ENST00000489921 EPRSP07814 1512 aaKnown RBP32.89■■■□□ 2.86
TNFRSF1B-202ENST00000489921 ABCA8O94911 1581 aa32.87■■■□□ 2.85
TNFRSF1B-202ENST00000489921 MAP3K4Q9Y6R4 1608 aa32.83■■■□□ 2.85
TNFRSF1B-202ENST00000489921 WDR7Q9Y4E6 1490 aa32.76■■■□□ 2.84
TNFRSF1B-202ENST00000489921 EEA1Q15075 1411 aa32.76■■■□□ 2.83
TNFRSF1B-202ENST00000489921 SAMD9Q5K651 1589 aa32.73■■■□□ 2.83
TNFRSF1B-202ENST00000489921 P3H3Q8IVL6 736 aa32.71■■■□□ 2.83
TNFRSF1B-202ENST00000489921 COL17A1Q9UMD9 1497 aaPredicted RBP32.7■■■□□ 2.83
TNFRSF1B-202ENST00000489921 TEX14Q8IWB6 1497 aa32.62■■■□□ 2.81
TNFRSF1B-202ENST00000489921 FAM9AQ8IZU1 332 aaPredicted RBP32.62■■■□□ 2.81
TNFRSF1B-202ENST00000489921 ATP10BO94823 1461 aa32.61■■■□□ 2.81
TNFRSF1B-202ENST00000489921 KDM4FA0A1W2PPD8 638 aa32.6■■■□□ 2.81
TNFRSF1B-202ENST00000489921 KCNH8Q96L42 1107 aa32.59■■■□□ 2.81
TNFRSF1B-202ENST00000489921 CFAP43Q8NDM7 1665 aa32.59■■■□□ 2.81
TNFRSF1B-202ENST00000489921 KIF21BO75037 1637 aa32.55■■■□□ 2.8
TNFRSF1B-202ENST00000489921 CD109Q6YHK3 1445 aa32.54■■■□□ 2.8
TNFRSF1B-202ENST00000489921 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
TNFRSF1B-202ENST00000489921 RAPGEF6Q8TEU7 1601 aa32.53■■■□□ 2.8
TNFRSF1B-202ENST00000489921 ARID3CA6NKF2 412 aa32.53■■■□□ 2.8
TNFRSF1B-202ENST00000489921 CHIC1Q5VXU3 224 aa32.5■■■□□ 2.79
TNFRSF1B-202ENST00000489921 RANGAP1P46060 587 aaPredicted RBP32.47■■■□□ 2.79
TNFRSF1B-202ENST00000489921 FHOD3Q2V2M9 1422 aa32.46■■■□□ 2.79
TNFRSF1B-202ENST00000489921 NUP153P49790 1475 aaKnown RBP32.43■■■□□ 2.78
TNFRSF1B-202ENST00000489921 ABCA9Q8IUA7 1624 aa32.39■■■□□ 2.78
TNFRSF1B-202ENST00000489921 EFCAB5A4FU69 1503 aa32.36■■■□□ 2.77
TNFRSF1B-202ENST00000489921 ADGRL1O94910 1474 aa32.33■■■□□ 2.77
TNFRSF1B-202ENST00000489921 ARAP3Q8WWN8 1544 aa32.3■■■□□ 2.76
TNFRSF1B-202ENST00000489921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.27■■■□□ 2.76
TNFRSF1B-202ENST00000489921 HNRNPUL2Q1KMD3 747 aaKnown RBP32.27■■■□□ 2.76
TNFRSF1B-202ENST00000489921 EHMT2Q96KQ7 1210 aa32.26■■■□□ 2.75
TNFRSF1B-202ENST00000489921 UBTFP17480 764 aaKnown RBP32.21■■■□□ 2.75
TNFRSF1B-202ENST00000489921 PHLDB1Q86UU1 1377 aa32.19■■■□□ 2.74
TNFRSF1B-202ENST00000489921 ARHGAP35Q9NRY4 1499 aa32.16■■■□□ 2.74
TNFRSF1B-202ENST00000489921 PLEKHD1A6NEE1 506 aa32.16■■■□□ 2.74
TNFRSF1B-202ENST00000489921 NEO1Q92859 1461 aa32.16■■■□□ 2.74
TNFRSF1B-202ENST00000489921 CDK13Q14004 1512 aaKnown RBP32.12■■■□□ 2.73
TNFRSF1B-202ENST00000489921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.1■■■□□ 2.73
TNFRSF1B-202ENST00000489921 RAPGEF3O95398 923 aa32.1■■■□□ 2.73
TNFRSF1B-202ENST00000489921 FRMPD1Q5SYB0 1578 aa32.08■■■□□ 2.73
TNFRSF1B-202ENST00000489921 TTC37Q6PGP7 1564 aa32.06■■■□□ 2.72
TNFRSF1B-202ENST00000489921 FMN1Q68DA7 1419 aa32.05■■■□□ 2.72
TNFRSF1B-202ENST00000489921 HECW1Q76N89 1606 aa32■■■□□ 2.71
TNFRSF1B-202ENST00000489921 AKNAQ7Z591 1439 aa31.98■■■□□ 2.71
TNFRSF1B-202ENST00000489921 RICTORQ6R327 1708 aa31.97■■■□□ 2.71
TNFRSF1B-202ENST00000489921 FANCAO15360 1455 aa31.97■■■□□ 2.71
TNFRSF1B-202ENST00000489921 LRRIQ1Q96JM4 1722 aa31.96■■■□□ 2.71
TNFRSF1B-202ENST00000489921 CFAP74Q9C0B2 1584 aa31.94■■■□□ 2.7
TNFRSF1B-202ENST00000489921 ATP1B4Q9UN42 357 aaPredicted RBP31.93■■■□□ 2.7
TNFRSF1B-202ENST00000489921 DENND4BO75064 1496 aaPredicted RBP31.91■■■□□ 2.7
TNFRSF1B-202ENST00000489921 PLCH2O75038 1416 aa31.88■■■□□ 2.69
TNFRSF1B-202ENST00000489921 ADAMTSL3P82987 1691 aa31.88■■■□□ 2.69
TNFRSF1B-202ENST00000489921 KIF14Q15058 1648 aa31.86■■■□□ 2.69
TNFRSF1B-202ENST00000489921 HECW2Q9P2P5 1572 aa31.84■■■□□ 2.69
TNFRSF1B-202ENST00000489921 ARHGEF40Q8TER5 1519 aa31.83■■■□□ 2.69
TNFRSF1B-202ENST00000489921 ZMYM4Q5VZL5 1548 aa31.81■■■□□ 2.68
TNFRSF1B-202ENST00000489921 BCORL1Q5H9F3 1711 aa31.81■■■□□ 2.68
TNFRSF1B-202ENST00000489921 CDK11AQ9UQ88 783 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF1B-202ENST00000489921 TROQ12816 1431 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF1B-202ENST00000489921 MYO5CQ9NQX4 1742 aa31.8■■■□□ 2.68
TNFRSF1B-202ENST00000489921 PCF11O94913 1555 aaKnown RBP31.78■■■□□ 2.68
TNFRSF1B-202ENST00000489921 CASKIN1Q8WXD9 1431 aa31.77■■■□□ 2.68
TNFRSF1B-202ENST00000489921 SCAPERQ9BY12 1400 aa31.75■■■□□ 2.67
TNFRSF1B-202ENST00000489921 SIGLEC1Q9BZZ2 1709 aa31.75■■■□□ 2.67
TNFRSF1B-202ENST00000489921 YEATS2Q9ULM3 1422 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms