RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
EPHB4-207ENST00000489808 SHROOM2Q13796 1616 aa32.28■■■□□ 2.76
EPHB4-207ENST00000489808 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
EPHB4-207ENST00000489808 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
EPHB4-207ENST00000489808 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
EPHB4-207ENST00000489808 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
EPHB4-207ENST00000489808 PRXQ9BXM0 1461 aa32.08■■■□□ 2.73
EPHB4-207ENST00000489808 TRHP20396 242 aaPredicted RBP32.01■■■□□ 2.71
EPHB4-207ENST00000489808 EEA1Q15075 1411 aa31.99■■■□□ 2.71
EPHB4-207ENST00000489808 IQGAP2Q13576 1575 aa31.98■■■□□ 2.71
EPHB4-207ENST00000489808 FAM9AQ8IZU1 332 aaPredicted RBP31.96■■■□□ 2.71
EPHB4-207ENST00000489808 CARMIL2Q6F5E8 1435 aa31.95■■■□□ 2.71
EPHB4-207ENST00000489808 PTPRGP23470 1445 aa31.91■■■□□ 2.7
EPHB4-207ENST00000489808 TNIKQ9UKE5 1360 aa31.89■■■□□ 2.7
EPHB4-207ENST00000489808 TTBK1Q5TCY1 1321 aaPredicted RBP31.86■■■□□ 2.69
EPHB4-207ENST00000489808 UGGT2Q9NYU1 1516 aa31.85■■■□□ 2.69
EPHB4-207ENST00000489808 DISP1Q96F81 1524 aa31.85■■■□□ 2.69
EPHB4-207ENST00000489808 NPM1P06748 294 aaKnown RBP eCLIP31.82■■■□□ 2.68
EPHB4-207ENST00000489808 CTTNBP2Q8WZ74 1663 aa31.7■■■□□ 2.67
EPHB4-207ENST00000489808 ADCY10Q96PN6 1610 aa31.68■■■□□ 2.66
EPHB4-207ENST00000489808 GOLGA3Q08378 1498 aa31.68■■■□□ 2.66
EPHB4-207ENST00000489808 KIAA0556O60303 1618 aa31.66■■■□□ 2.66
EPHB4-207ENST00000489808 UACAQ9BZF9 1416 aa31.66■■■□□ 2.66
EPHB4-207ENST00000489808 UHRF1BP1LA0JNW5 1464 aa31.6■■■□□ 2.65
EPHB4-207ENST00000489808 P3H3Q8IVL6 736 aa31.59■■■□□ 2.65
EPHB4-207ENST00000489808 KIF21BO75037 1637 aa31.57■■■□□ 2.64
EPHB4-207ENST00000489808 ABCC2Q92887 1545 aa31.56■■■□□ 2.64
EPHB4-207ENST00000489808 MAPKBP1O60336 1514 aa31.55■■■□□ 2.64
EPHB4-207ENST00000489808 EHMT2Q96KQ7 1210 aa31.55■■■□□ 2.64
EPHB4-207ENST00000489808 FAM69CQ0P6D2 419 aa31.54■■■□□ 2.64
EPHB4-207ENST00000489808 RANGAP1P46060 587 aaPredicted RBP31.53■■■□□ 2.64
EPHB4-207ENST00000489808 UBTFP17480 764 aaKnown RBP31.52■■■□□ 2.64
EPHB4-207ENST00000489808 ABCC10Q5T3U5 1492 aa31.5■■■□□ 2.63
EPHB4-207ENST00000489808 PLB1Q6P1J6 1458 aa31.47■■■□□ 2.63
EPHB4-207ENST00000489808 KDM5BQ9UGL1 1544 aa31.44■■■□□ 2.62
EPHB4-207ENST00000489808 ASXL2Q76L83 1435 aa31.41■■■□□ 2.62
EPHB4-207ENST00000489808 SAMD9Q5K651 1589 aa31.39■■■□□ 2.62
EPHB4-207ENST00000489808 ABCA8O94911 1581 aa31.38■■■□□ 2.61
EPHB4-207ENST00000489808 DIP2BQ9P265 1576 aa31.34■■■□□ 2.61
EPHB4-207ENST00000489808 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
EPHB4-207ENST00000489808 FHOD3Q2V2M9 1422 aa31.31■■■□□ 2.6
EPHB4-207ENST00000489808 ZCCHC11Q5TAX3 1644 aaKnown RBP31.27■■■□□ 2.6
EPHB4-207ENST00000489808 ARID3CA6NKF2 412 aa31.25■■■□□ 2.59
EPHB4-207ENST00000489808 EFCAB5A4FU69 1503 aa31.24■■■□□ 2.59
EPHB4-207ENST00000489808 ATP10BO94823 1461 aa31.21■■■□□ 2.59
EPHB4-207ENST00000489808 EPRSP07814 1512 aaKnown RBP31.2■■■□□ 2.59
EPHB4-207ENST00000489808 WDR7Q9Y4E6 1490 aa31.19■■■□□ 2.58
EPHB4-207ENST00000489808 GLI2P10070 1586 aa31.18■■■□□ 2.58
EPHB4-207ENST00000489808 KCNH8Q96L42 1107 aa31.18■■■□□ 2.58
EPHB4-207ENST00000489808 ARHGAP35Q9NRY4 1499 aa31.14■■■□□ 2.58
EPHB4-207ENST00000489808 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
EPHB4-207ENST00000489808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.13■■■□□ 2.57
EPHB4-207ENST00000489808 HNRNPUL2Q1KMD3 747 aaKnown RBP31.13■■■□□ 2.57
EPHB4-207ENST00000489808 NUP153P49790 1475 aaKnown RBP31.1■■■□□ 2.57
EPHB4-207ENST00000489808 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
EPHB4-207ENST00000489808 TSPOAP1O95153 1857 aa31.01■■■□□ 2.56
EPHB4-207ENST00000489808 PLEKHD1A6NEE1 506 aa31.01■■■□□ 2.55
EPHB4-207ENST00000489808 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
EPHB4-207ENST00000489808 CD109Q6YHK3 1445 aa30.98■■■□□ 2.55
EPHB4-207ENST00000489808 MAP3K4Q9Y6R4 1608 aa30.96■■■□□ 2.55
EPHB4-207ENST00000489808 TEX14Q8IWB6 1497 aa30.92■■■□□ 2.54
EPHB4-207ENST00000489808 PPRC1Q5VV67 1664 aaKnown RBP30.92■■■□□ 2.54
EPHB4-207ENST00000489808 CLIP1P30622 1438 aa30.91■■■□□ 2.54
EPHB4-207ENST00000489808 MAGI3Q5TCQ9 1506 aa30.88■■■□□ 2.53
EPHB4-207ENST00000489808 LOC105371045A0A1W2PR82 267 aa30.88■■■□□ 2.53
EPHB4-207ENST00000489808 KDM6BO15054 1643 aa30.87■■■□□ 2.53
EPHB4-207ENST00000489808 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
EPHB4-207ENST00000489808 COL17A1Q9UMD9 1497 aaPredicted RBP30.83■■■□□ 2.53
EPHB4-207ENST00000489808 CFAP43Q8NDM7 1665 aa30.83■■■□□ 2.53
EPHB4-207ENST00000489808 CDK11AQ9UQ88 783 aaPredicted RBP30.82■■■□□ 2.52
EPHB4-207ENST00000489808 HECW1Q76N89 1606 aa30.79■■■□□ 2.52
EPHB4-207ENST00000489808 CASKIN1Q8WXD9 1431 aa30.79■■■□□ 2.52
EPHB4-207ENST00000489808 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
EPHB4-207ENST00000489808 CEP162Q5TB80 1403 aa30.72■■■□□ 2.51
EPHB4-207ENST00000489808 PHLDB1Q86UU1 1377 aa30.7■■■□□ 2.51
EPHB4-207ENST00000489808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.66■■■□□ 2.5
EPHB4-207ENST00000489808 PCF11O94913 1555 aaKnown RBP30.65■■■□□ 2.5
EPHB4-207ENST00000489808 TROQ12816 1431 aaPredicted RBP30.64■■■□□ 2.5
EPHB4-207ENST00000489808 FYCO1Q9BQS8 1478 aa30.64■■■□□ 2.5
EPHB4-207ENST00000489808 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
EPHB4-207ENST00000489808 ARAP3Q8WWN8 1544 aa30.63■■■□□ 2.49
EPHB4-207ENST00000489808 NEO1Q92859 1461 aa30.62■■■□□ 2.49
EPHB4-207ENST00000489808 RAPGEF3O95398 923 aa30.57■■■□□ 2.48
EPHB4-207ENST00000489808 PLCH2O75038 1416 aa30.56■■■□□ 2.48
EPHB4-207ENST00000489808 LRRIQ1Q96JM4 1722 aa30.56■■■□□ 2.48
EPHB4-207ENST00000489808 TTC37Q6PGP7 1564 aa30.55■■■□□ 2.48
EPHB4-207ENST00000489808 AKNAQ7Z591 1439 aa30.54■■■□□ 2.48
EPHB4-207ENST00000489808 FANCAO15360 1455 aa30.53■■■□□ 2.48
EPHB4-207ENST00000489808 EFCAB2Q5VUJ9 269 aa30.51■■■□□ 2.47
EPHB4-207ENST00000489808 AEBP2Q6ZN18 517 aaPredicted RBP30.51■■■□□ 2.47
EPHB4-207ENST00000489808 KIF14Q15058 1648 aa30.47■■■□□ 2.47
EPHB4-207ENST00000489808 KDM4FA0A1W2PPD8 638 aa30.45■■■□□ 2.47
EPHB4-207ENST00000489808 DENND4BO75064 1496 aaPredicted RBP30.44■■■□□ 2.46
EPHB4-207ENST00000489808 SCAPERQ9BY12 1400 aa30.39■■■□□ 2.45
EPHB4-207ENST00000489808 MTUS2Q5JR59 1369 aa30.38■■■□□ 2.45
EPHB4-207ENST00000489808 CFAP74Q9C0B2 1584 aa30.37■■■□□ 2.45
EPHB4-207ENST00000489808 VPS8Q8N3P4 1428 aa30.37■■■□□ 2.45
EPHB4-207ENST00000489808 ADGRL1O94910 1474 aa30.35■■■□□ 2.45
EPHB4-207ENST00000489808 ARHGAP5Q13017 1502 aa30.32■■■□□ 2.44
EPHB4-207ENST00000489808 MYO5CQ9NQX4 1742 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms