RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PRG4Q92954 1404 aaPredicted RBP24.11■■□□□ 1.45
VTI1A-206ENST00000489142 JPH4Q96JJ6 628 aa24.09■■□□□ 1.45
VTI1A-206ENST00000489142 CARMIL1Q5VZK9 1371 aa24.07■■□□□ 1.44
VTI1A-206ENST00000489142 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
VTI1A-206ENST00000489142 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
VTI1A-206ENST00000489142 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
VTI1A-206ENST00000489142 ADCY10Q96PN6 1610 aa23.85■■□□□ 1.41
VTI1A-206ENST00000489142 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
VTI1A-206ENST00000489142 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
VTI1A-206ENST00000489142 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
VTI1A-206ENST00000489142 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
VTI1A-206ENST00000489142 PTPRGP23470 1445 aa23.76■■□□□ 1.39
VTI1A-206ENST00000489142 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
VTI1A-206ENST00000489142 TNIKQ9UKE5 1360 aa23.73■■□□□ 1.39
VTI1A-206ENST00000489142 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
VTI1A-206ENST00000489142 UGGT2Q9NYU1 1516 aa23.73■■□□□ 1.39
VTI1A-206ENST00000489142 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
VTI1A-206ENST00000489142 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
VTI1A-206ENST00000489142 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
VTI1A-206ENST00000489142 DIP2BQ9P265 1576 aa23.63■■□□□ 1.37
VTI1A-206ENST00000489142 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
VTI1A-206ENST00000489142 FAM69CQ0P6D2 419 aa23.61■■□□□ 1.37
VTI1A-206ENST00000489142 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
VTI1A-206ENST00000489142 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
VTI1A-206ENST00000489142 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
VTI1A-206ENST00000489142 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
VTI1A-206ENST00000489142 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
VTI1A-206ENST00000489142 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
VTI1A-206ENST00000489142 GOLGA3Q08378 1498 aa23.53■■□□□ 1.36
VTI1A-206ENST00000489142 EEA1Q15075 1411 aa23.52■■□□□ 1.36
VTI1A-206ENST00000489142 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
VTI1A-206ENST00000489142 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
VTI1A-206ENST00000489142 PLB1Q6P1J6 1458 aa23.49■■□□□ 1.35
VTI1A-206ENST00000489142 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
VTI1A-206ENST00000489142 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
VTI1A-206ENST00000489142 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
VTI1A-206ENST00000489142 ABCA8O94911 1581 aa23.44■■□□□ 1.34
VTI1A-206ENST00000489142 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
VTI1A-206ENST00000489142 KIF21BO75037 1637 aa23.41■■□□□ 1.34
VTI1A-206ENST00000489142 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
VTI1A-206ENST00000489142 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
VTI1A-206ENST00000489142 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
VTI1A-206ENST00000489142 GLI2P10070 1586 aa23.37■■□□□ 1.33
VTI1A-206ENST00000489142 EPRSP07814 1512 aaKnown RBP23.36■■□□□ 1.33
VTI1A-206ENST00000489142 KDM6BO15054 1643 aa23.35■■□□□ 1.33
VTI1A-206ENST00000489142 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
VTI1A-206ENST00000489142 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
VTI1A-206ENST00000489142 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
VTI1A-206ENST00000489142 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
VTI1A-206ENST00000489142 RAPGEF6Q8TEU7 1601 aa23.28■■□□□ 1.32
VTI1A-206ENST00000489142 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
VTI1A-206ENST00000489142 ATP10BO94823 1461 aa23.23■■□□□ 1.31
VTI1A-206ENST00000489142 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
VTI1A-206ENST00000489142 EFCAB5A4FU69 1503 aa23.2■■□□□ 1.3
VTI1A-206ENST00000489142 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
VTI1A-206ENST00000489142 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
VTI1A-206ENST00000489142 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
VTI1A-206ENST00000489142 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
VTI1A-206ENST00000489142 COL17A1Q9UMD9 1497 aaPredicted RBP23.14■■□□□ 1.29
VTI1A-206ENST00000489142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
VTI1A-206ENST00000489142 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
VTI1A-206ENST00000489142 CD109Q6YHK3 1445 aa23.13■■□□□ 1.29
VTI1A-206ENST00000489142 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.28
VTI1A-206ENST00000489142 ARHGAP35Q9NRY4 1499 aa23.07■■□□□ 1.28
VTI1A-206ENST00000489142 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
VTI1A-206ENST00000489142 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
VTI1A-206ENST00000489142 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
VTI1A-206ENST00000489142 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
VTI1A-206ENST00000489142 FMN1Q68DA7 1419 aa22.96■■□□□ 1.27
VTI1A-206ENST00000489142 KDM4FA0A1W2PPD8 638 aa22.94■■□□□ 1.26
VTI1A-206ENST00000489142 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
VTI1A-206ENST00000489142 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
VTI1A-206ENST00000489142 TTC37Q6PGP7 1564 aa22.92■■□□□ 1.26
VTI1A-206ENST00000489142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
VTI1A-206ENST00000489142 ARAP3Q8WWN8 1544 aa22.89■■□□□ 1.26
VTI1A-206ENST00000489142 ADGRL1O94910 1474 aa22.87■■□□□ 1.25
VTI1A-206ENST00000489142 PCF11O94913 1555 aaKnown RBP22.87■■□□□ 1.25
VTI1A-206ENST00000489142 NEO1Q92859 1461 aa22.85■■□□□ 1.25
VTI1A-206ENST00000489142 KIF14Q15058 1648 aa22.82■■□□□ 1.24
VTI1A-206ENST00000489142 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
VTI1A-206ENST00000489142 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
VTI1A-206ENST00000489142 CLIP1P30622 1438 aa22.81■■□□□ 1.24
VTI1A-206ENST00000489142 FANCAO15360 1455 aa22.79■■□□□ 1.24
VTI1A-206ENST00000489142 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
VTI1A-206ENST00000489142 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
VTI1A-206ENST00000489142 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
VTI1A-206ENST00000489142 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.23
VTI1A-206ENST00000489142 AKNAQ7Z591 1439 aa22.76■■□□□ 1.23
VTI1A-206ENST00000489142 RICTORQ6R327 1708 aa22.75■■□□□ 1.23
VTI1A-206ENST00000489142 CDK11AQ9UQ88 783 aaPredicted RBP22.74■■□□□ 1.23
VTI1A-206ENST00000489142 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
VTI1A-206ENST00000489142 PLCH2O75038 1416 aa22.71■■□□□ 1.23
VTI1A-206ENST00000489142 DENND4BO75064 1496 aaPredicted RBP22.71■■□□□ 1.23
VTI1A-206ENST00000489142 CCDC18Q5T9S5 1454 aa22.71■■□□□ 1.23
VTI1A-206ENST00000489142 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
VTI1A-206ENST00000489142 ARHGEF40Q8TER5 1519 aa22.66■■□□□ 1.22
VTI1A-206ENST00000489142 ARHGAP5Q13017 1502 aa22.65■■□□□ 1.22
VTI1A-206ENST00000489142 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
VTI1A-206ENST00000489142 CDC42BPBQ9Y5S2 1711 aa22.64■■□□□ 1.21
VTI1A-206ENST00000489142 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms