RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 NUP160Q12769 1436 aa20.51■□□□□ 0.87
TOP3A-206ENST00000489131 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
TOP3A-206ENST00000489131 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
TOP3A-206ENST00000489131 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
TOP3A-206ENST00000489131 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
TOP3A-206ENST00000489131 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
TOP3A-206ENST00000489131 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
TOP3A-206ENST00000489131 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
TOP3A-206ENST00000489131 UGGT2Q9NYU1 1516 aa20.43■□□□□ 0.86
TOP3A-206ENST00000489131 CHD1O14646 1710 aa20.42■□□□□ 0.86
TOP3A-206ENST00000489131 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
TOP3A-206ENST00000489131 VPS8Q8N3P4 1428 aa20.39■□□□□ 0.85
TOP3A-206ENST00000489131 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
TOP3A-206ENST00000489131 SHROOM2Q13796 1616 aa20.28■□□□□ 0.84
TOP3A-206ENST00000489131 FBLN2P98095 1184 aa20.28■□□□□ 0.84
TOP3A-206ENST00000489131 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
TOP3A-206ENST00000489131 KIAA0556O60303 1618 aa20.27■□□□□ 0.83
TOP3A-206ENST00000489131 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
TOP3A-206ENST00000489131 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
TOP3A-206ENST00000489131 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-206ENST00000489131 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
TOP3A-206ENST00000489131 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
TOP3A-206ENST00000489131 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
TOP3A-206ENST00000489131 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
TOP3A-206ENST00000489131 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
TOP3A-206ENST00000489131 PCF11O94913 1555 aaKnown RBP20.17■□□□□ 0.82
TOP3A-206ENST00000489131 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-206ENST00000489131 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
TOP3A-206ENST00000489131 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
TOP3A-206ENST00000489131 TIAM1Q13009 1591 aa20.08■□□□□ 0.8
TOP3A-206ENST00000489131 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
TOP3A-206ENST00000489131 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
TOP3A-206ENST00000489131 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
TOP3A-206ENST00000489131 CCDC18Q5T9S5 1454 aa20.02■□□□□ 0.8
TOP3A-206ENST00000489131 ABCA8O94911 1581 aa20.02■□□□□ 0.8
TOP3A-206ENST00000489131 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
TOP3A-206ENST00000489131 APLP2Q06481 763 aa20.01■□□□□ 0.79
TOP3A-206ENST00000489131 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
TOP3A-206ENST00000489131 NUP153P49790 1475 aaKnown RBP19.98■□□□□ 0.79
TOP3A-206ENST00000489131 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
TOP3A-206ENST00000489131 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
TOP3A-206ENST00000489131 PTPRGP23470 1445 aa19.96■□□□□ 0.79
TOP3A-206ENST00000489131 PLB1Q6P1J6 1458 aa19.94■□□□□ 0.78
TOP3A-206ENST00000489131 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-206ENST00000489131 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-206ENST00000489131 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
TOP3A-206ENST00000489131 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
TOP3A-206ENST00000489131 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
TOP3A-206ENST00000489131 ABCC2Q92887 1545 aa19.88■□□□□ 0.77
TOP3A-206ENST00000489131 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
TOP3A-206ENST00000489131 MAGI3Q5TCQ9 1506 aa19.84■□□□□ 0.77
TOP3A-206ENST00000489131 PPARGC1BQ86YN6 1023 aaKnown RBP19.83■□□□□ 0.77
TOP3A-206ENST00000489131 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
TOP3A-206ENST00000489131 ATP10BO94823 1461 aa19.81■□□□□ 0.76
TOP3A-206ENST00000489131 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
TOP3A-206ENST00000489131 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
TOP3A-206ENST00000489131 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
TOP3A-206ENST00000489131 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
TOP3A-206ENST00000489131 RRBP1Q9P2E9 1410 aaKnown RBP19.78■□□□□ 0.76
TOP3A-206ENST00000489131 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
TOP3A-206ENST00000489131 TROQ12816 1431 aaPredicted RBP19.76■□□□□ 0.75
TOP3A-206ENST00000489131 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
TOP3A-206ENST00000489131 NCOA2Q15596 1464 aa19.74■□□□□ 0.75
TOP3A-206ENST00000489131 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
TOP3A-206ENST00000489131 PHLDB1Q86UU1 1377 aa19.71■□□□□ 0.75
TOP3A-206ENST00000489131 ZCCHC11Q5TAX3 1644 aaKnown RBP19.71■□□□□ 0.75
TOP3A-206ENST00000489131 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
TOP3A-206ENST00000489131 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
TOP3A-206ENST00000489131 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
TOP3A-206ENST00000489131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.69■□□□□ 0.74
TOP3A-206ENST00000489131 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
TOP3A-206ENST00000489131 MYOM3Q5VTT5 1437 aa19.67■□□□□ 0.74
TOP3A-206ENST00000489131 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
TOP3A-206ENST00000489131 KIF14Q15058 1648 aa19.65■□□□□ 0.74
TOP3A-206ENST00000489131 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
TOP3A-206ENST00000489131 ABCC10Q5T3U5 1492 aa19.63■□□□□ 0.73
TOP3A-206ENST00000489131 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
TOP3A-206ENST00000489131 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
TOP3A-206ENST00000489131 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
TOP3A-206ENST00000489131 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
TOP3A-206ENST00000489131 ITSN2Q9NZM3 1697 aa19.6■□□□□ 0.73
TOP3A-206ENST00000489131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
TOP3A-206ENST00000489131 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
TOP3A-206ENST00000489131 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
TOP3A-206ENST00000489131 WDR7Q9Y4E6 1490 aa19.55■□□□□ 0.72
TOP3A-206ENST00000489131 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
TOP3A-206ENST00000489131 CDC42BPAQ5VT25 1732 aa19.54■□□□□ 0.72
TOP3A-206ENST00000489131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.53■□□□□ 0.72
TOP3A-206ENST00000489131 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
TOP3A-206ENST00000489131 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
TOP3A-206ENST00000489131 ARAP3Q8WWN8 1544 aa19.5■□□□□ 0.71
TOP3A-206ENST00000489131 ASXL2Q76L83 1435 aa19.5■□□□□ 0.71
TOP3A-206ENST00000489131 TTC37Q6PGP7 1564 aa19.49■□□□□ 0.71
TOP3A-206ENST00000489131 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
TOP3A-206ENST00000489131 MYO5CQ9NQX4 1742 aa19.46■□□□□ 0.71
TOP3A-206ENST00000489131 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
TOP3A-206ENST00000489131 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
TOP3A-206ENST00000489131 PLCH2O75038 1416 aa19.42■□□□□ 0.7
TOP3A-206ENST00000489131 CAMSAP2Q08AD1 1489 aa19.42■□□□□ 0.7
TOP3A-206ENST00000489131 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms