RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	LOC105371045	A0A1W2PR82	267 aa		29.96	■■■□□ 2.39
PNCK-231	ENST00000488994	SHROOM2	Q13796	1616 aa		29.91	■■■□□ 2.38
PNCK-231	ENST00000488994	KIF21B	O75037	1637 aa		29.89	■■■□□ 2.37
PNCK-231	ENST00000488994	CARMIL1	Q5VZK9	1371 aa		29.88	■■■□□ 2.37
PNCK-231	ENST00000488994	CUL7	Q14999	1698 aa		29.87	■■■□□ 2.37
PNCK-231	ENST00000488994	PRX	Q9BXM0	1461 aa		29.86	■■■□□ 2.37
PNCK-231	ENST00000488994	GOLGA3	Q08378	1498 aa		29.85	■■■□□ 2.37
PNCK-231	ENST00000488994	ERCC6L2	Q5T890	1561 aa		29.81	■■■□□ 2.36
PNCK-231	ENST00000488994	UBTF	P17480	764 aa	Known RBP	29.73	■■■□□ 2.35
PNCK-231	ENST00000488994	EHMT2	Q96KQ7	1210 aa		29.73	■■■□□ 2.35
PNCK-231	ENST00000488994	RAPGEF2	Q9Y4G8	1499 aa		29.72	■■■□□ 2.35
PNCK-231	ENST00000488994	JPH4	Q96JJ6	628 aa		29.71	■■■□□ 2.35
PNCK-231	ENST00000488994	TNIK	Q9UKE5	1360 aa		29.71	■■■□□ 2.35
PNCK-231	ENST00000488994	PRG4	Q92954	1404 aa	Predicted RBP	29.68	■■■□□ 2.34
PNCK-231	ENST00000488994	KIAA0586	Q9BVV6	1533 aa		29.68	■■■□□ 2.34
PNCK-231	ENST00000488994	TRH	P20396	242 aa	Predicted RBP	29.62	■■■□□ 2.33
PNCK-231	ENST00000488994	CEP162	Q5TB80	1403 aa		29.44	■■■□□ 2.3
PNCK-231	ENST00000488994	IQGAP2	Q13576	1575 aa		29.39	■■■□□ 2.3
PNCK-231	ENST00000488994	CTTNBP2	Q8WZ74	1663 aa		29.35	■■■□□ 2.29
PNCK-231	ENST00000488994	CLIP1	P30622	1438 aa		29.34	■■■□□ 2.29
PNCK-231	ENST00000488994	ADCY10	Q96PN6	1610 aa		29.31	■■■□□ 2.28
PNCK-231	ENST00000488994	CARMIL2	Q6F5E8	1435 aa		29.31	■■■□□ 2.28
PNCK-231	ENST00000488994	UGGT2	Q9NYU1	1516 aa		29.29	■■■□□ 2.28
PNCK-231	ENST00000488994	MAPKBP1	O60336	1514 aa		29.29	■■■□□ 2.28
PNCK-231	ENST00000488994	PTPRG	P23470	1445 aa		29.28	■■■□□ 2.28
PNCK-231	ENST00000488994	DISP1	Q96F81	1524 aa		29.26	■■■□□ 2.27
PNCK-231	ENST00000488994	KIF13A	Q9H1H9	1805 aa		29.2	■■■□□ 2.26
PNCK-231	ENST00000488994	NPM1	P06748	294 aa	Known RBP eCLIP	29.2	■■■□□ 2.26
PNCK-231	ENST00000488994	RANGAP1	P46060	587 aa	Predicted RBP	29.2	■■■□□ 2.26
PNCK-231	ENST00000488994	ABCC10	Q5T3U5	1492 aa		29.19	■■■□□ 2.26
PNCK-231	ENST00000488994	UHRF1BP1L	A0JNW5	1464 aa		29.16	■■■□□ 2.26
PNCK-231	ENST00000488994	EFCAB5	A4FU69	1503 aa		29.13	■■■□□ 2.25
PNCK-231	ENST00000488994	ABCC2	Q92887	1545 aa		29.13	■■■□□ 2.25
PNCK-231	ENST00000488994	KIAA0556	O60303	1618 aa		29.12	■■■□□ 2.25
PNCK-231	ENST00000488994	ARHGAP35	Q9NRY4	1499 aa		29.11	■■■□□ 2.25
PNCK-231	ENST00000488994	DIP2B	Q9P265	1576 aa		29.1	■■■□□ 2.25
PNCK-231	ENST00000488994	UACA	Q9BZF9	1416 aa		29.08	■■■□□ 2.25
PNCK-231	ENST00000488994	SAMD9	Q5K651	1589 aa		29.07	■■■□□ 2.24
PNCK-231	ENST00000488994	VPS8	Q8N3P4	1428 aa		29.04	■■■□□ 2.24
PNCK-231	ENST00000488994	FAM69C	Q0P6D2	419 aa		29.04	■■■□□ 2.24
PNCK-231	ENST00000488994	P3H3	Q8IVL6	736 aa		29.01	■■■□□ 2.23
PNCK-231	ENST00000488994	KDM5B	Q9UGL1	1544 aa		29	■■■□□ 2.23
PNCK-231	ENST00000488994	PLB1	Q6P1J6	1458 aa		28.97	■■■□□ 2.23
PNCK-231	ENST00000488994	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.95	■■■□□ 2.23
PNCK-231	ENST00000488994	ASXL2	Q76L83	1435 aa		28.95	■■■□□ 2.22
PNCK-231	ENST00000488994	FHOD3	Q2V2M9	1422 aa		28.92	■■■□□ 2.22
PNCK-231	ENST00000488994	GLI2	P10070	1586 aa		28.9	■■■□□ 2.22
PNCK-231	ENST00000488994	FMN1	Q68DA7	1419 aa		28.9	■■■□□ 2.22
PNCK-231	ENST00000488994	ABCA8	O94911	1581 aa		28.86	■■■□□ 2.21
PNCK-231	ENST00000488994	APLP2	Q06481	763 aa		28.86	■■■□□ 2.21
PNCK-231	ENST00000488994	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.83	■■■□□ 2.21
PNCK-231	ENST00000488994	EPRS	P07814	1512 aa	Known RBP	28.79	■■■□□ 2.2
PNCK-231	ENST00000488994	CASKIN1	Q8WXD9	1431 aa		28.76	■■■□□ 2.19
PNCK-231	ENST00000488994	WDR7	Q9Y4E6	1490 aa		28.74	■■■□□ 2.19
PNCK-231	ENST00000488994	PPRC1	Q5VV67	1664 aa	Known RBP	28.73	■■■□□ 2.19
PNCK-231	ENST00000488994	FYCO1	Q9BQS8	1478 aa		28.72	■■■□□ 2.19
PNCK-231	ENST00000488994	TSPOAP1	O95153	1857 aa		28.72	■■■□□ 2.19
PNCK-231	ENST00000488994	MAP3K4	Q9Y6R4	1608 aa		28.71	■■■□□ 2.19
PNCK-231	ENST00000488994	KDM6B	O15054	1643 aa		28.69	■■■□□ 2.18
PNCK-231	ENST00000488994	RAPGEF6	Q8TEU7	1601 aa		28.68	■■■□□ 2.18
PNCK-231	ENST00000488994	MAP3K1	Q13233	1512 aa		28.67	■■■□□ 2.18
PNCK-231	ENST00000488994	PCF11	O94913	1555 aa	Known RBP	28.65	■■■□□ 2.18
PNCK-231	ENST00000488994	NUP153	P49790	1475 aa	Known RBP	28.65	■■■□□ 2.18
PNCK-231	ENST00000488994	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.62	■■■□□ 2.17
PNCK-231	ENST00000488994	ATP10B	O94823	1461 aa		28.62	■■■□□ 2.17
PNCK-231	ENST00000488994	TEX14	Q8IWB6	1497 aa		28.6	■■■□□ 2.17
PNCK-231	ENST00000488994	HECW1	Q76N89	1606 aa		28.56	■■■□□ 2.16
PNCK-231	ENST00000488994	ARID3C	A6NKF2	412 aa		28.55	■■■□□ 2.16
PNCK-231	ENST00000488994	MAGI3	Q5TCQ9	1506 aa		28.55	■■■□□ 2.16
PNCK-231	ENST00000488994	CCDC18	Q5T9S5	1454 aa		28.54	■■■□□ 2.16
PNCK-231	ENST00000488994	TIAM1	Q13009	1591 aa		28.54	■■■□□ 2.16
PNCK-231	ENST00000488994	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.52	■■■□□ 2.16
PNCK-231	ENST00000488994	CFAP43	Q8NDM7	1665 aa		28.52	■■■□□ 2.16
PNCK-231	ENST00000488994	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.52	■■■□□ 2.16
PNCK-231	ENST00000488994	CD109	Q6YHK3	1445 aa		28.5	■■■□□ 2.15
PNCK-231	ENST00000488994	TRIM26	Q12899	539 aa	Predicted RBP	28.48	■■■□□ 2.15
PNCK-231	ENST00000488994	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.47	■■■□□ 2.15
PNCK-231	ENST00000488994	LRRIQ1	Q96JM4	1722 aa		28.46	■■■□□ 2.15
PNCK-231	ENST00000488994	CDK13	Q14004	1512 aa	Known RBP	28.46	■■■□□ 2.15
PNCK-231	ENST00000488994	KCNH8	Q96L42	1107 aa		28.45	■■■□□ 2.15
PNCK-231	ENST00000488994	KANK4	Q5T7N3	995 aa	Predicted RBP	28.44	■■■□□ 2.14
PNCK-231	ENST00000488994	LRRC9	Q6ZRR7	1453 aa		28.44	■■■□□ 2.14
PNCK-231	ENST00000488994	ABCA9	Q8IUA7	1624 aa		28.4	■■■□□ 2.14
PNCK-231	ENST00000488994	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.4	■■■□□ 2.14
PNCK-231	ENST00000488994	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.39	■■■□□ 2.14
PNCK-231	ENST00000488994	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.39	■■■□□ 2.14
PNCK-231	ENST00000488994	MTUS2	Q5JR59	1369 aa		28.36	■■■□□ 2.13
PNCK-231	ENST00000488994	PLEKHD1	A6NEE1	506 aa		28.35	■■■□□ 2.13
PNCK-231	ENST00000488994	PHLDB1	Q86UU1	1377 aa		28.32	■■■□□ 2.12
PNCK-231	ENST00000488994	ARAP3	Q8WWN8	1544 aa		28.32	■■■□□ 2.12
PNCK-231	ENST00000488994	KDM4F	A0A1W2PPD8	638 aa		28.31	■■■□□ 2.12
PNCK-231	ENST00000488994	EHBP1L1	Q8N3D4	1523 aa		28.29	■■■□□ 2.12
PNCK-231	ENST00000488994	NEO1	Q92859	1461 aa		28.25	■■■□□ 2.11
PNCK-231	ENST00000488994	PCGF6	Q9BYE7	350 aa		28.24	■■■□□ 2.11
PNCK-231	ENST00000488994	TRO	Q12816	1431 aa	Predicted RBP	28.24	■■■□□ 2.11
PNCK-231	ENST00000488994	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.17	■■■□□ 2.1
PNCK-231	ENST00000488994	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.15	■■■□□ 2.1
PNCK-231	ENST00000488994	ADGRL1	O94910	1474 aa		28.14	■■■□□ 2.09
PNCK-231	ENST00000488994	NCOA2	Q15596	1464 aa		28.14	■■■□□ 2.09
PNCK-231	ENST00000488994	KIF14	Q15058	1648 aa		28.13	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms