RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CUL7Q14999 1698 aa28.82■■■□□ 2.2
COL16A1-215ENST00000488897 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
COL16A1-215ENST00000488897 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
COL16A1-215ENST00000488897 KIF21BO75037 1637 aa28.68■■■□□ 2.18
COL16A1-215ENST00000488897 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
COL16A1-215ENST00000488897 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
COL16A1-215ENST00000488897 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
COL16A1-215ENST00000488897 NUP160Q12769 1436 aa28.6■■■□□ 2.17
COL16A1-215ENST00000488897 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
COL16A1-215ENST00000488897 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
COL16A1-215ENST00000488897 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
COL16A1-215ENST00000488897 ERCC6L2Q5T890 1561 aa28.47■■■□□ 2.15
COL16A1-215ENST00000488897 CTTNBP2Q8WZ74 1663 aa28.46■■■□□ 2.15
COL16A1-215ENST00000488897 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.14
COL16A1-215ENST00000488897 IQGAP2Q13576 1575 aa28.44■■■□□ 2.14
COL16A1-215ENST00000488897 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
COL16A1-215ENST00000488897 PRG4Q92954 1404 aaPredicted RBP28.4■■■□□ 2.14
COL16A1-215ENST00000488897 CEP162Q5TB80 1403 aa28.34■■■□□ 2.13
COL16A1-215ENST00000488897 FHOD3Q2V2M9 1422 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 CLIP1P30622 1438 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
COL16A1-215ENST00000488897 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
COL16A1-215ENST00000488897 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
COL16A1-215ENST00000488897 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
COL16A1-215ENST00000488897 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 ATP1B4Q9UN42 357 aaPredicted RBP28.21■■■□□ 2.11
COL16A1-215ENST00000488897 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
COL16A1-215ENST00000488897 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3CA6NJZ7 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3BA6NNM3 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3Q9UFD9 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 CARMIL2Q6F5E8 1435 aa28.15■■■□□ 2.1
COL16A1-215ENST00000488897 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
COL16A1-215ENST00000488897 PTPRGP23470 1445 aa28.1■■■□□ 2.09
COL16A1-215ENST00000488897 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
COL16A1-215ENST00000488897 EFCAB5A4FU69 1503 aa28.01■■■□□ 2.07
COL16A1-215ENST00000488897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
COL16A1-215ENST00000488897 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
COL16A1-215ENST00000488897 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
COL16A1-215ENST00000488897 UACAQ9BZF9 1416 aa27.86■■■□□ 2.05
COL16A1-215ENST00000488897 FMN1Q68DA7 1419 aa27.85■■■□□ 2.05
COL16A1-215ENST00000488897 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
COL16A1-215ENST00000488897 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
COL16A1-215ENST00000488897 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
COL16A1-215ENST00000488897 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
COL16A1-215ENST00000488897 ABCA8O94911 1581 aa27.8■■■□□ 2.04
COL16A1-215ENST00000488897 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
COL16A1-215ENST00000488897 LRRIQ1Q96JM4 1722 aa27.77■■■□□ 2.04
COL16A1-215ENST00000488897 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
COL16A1-215ENST00000488897 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
COL16A1-215ENST00000488897 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
COL16A1-215ENST00000488897 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
COL16A1-215ENST00000488897 ATP10BO94823 1461 aa27.72■■■□□ 2.03
COL16A1-215ENST00000488897 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
COL16A1-215ENST00000488897 NPM1P06748 294 aaKnown RBP eCLIP27.69■■■□□ 2.02
COL16A1-215ENST00000488897 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
COL16A1-215ENST00000488897 FYCO1Q9BQS8 1478 aa27.66■■■□□ 2.02
COL16A1-215ENST00000488897 APLP2Q06481 763 aa27.65■■■□□ 2.02
COL16A1-215ENST00000488897 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
COL16A1-215ENST00000488897 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
COL16A1-215ENST00000488897 UHRF1BP1LA0JNW5 1464 aa27.61■■■□□ 2.01
COL16A1-215ENST00000488897 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
COL16A1-215ENST00000488897 KDM5BQ9UGL1 1544 aa27.59■■■□□ 2.01
COL16A1-215ENST00000488897 PLEKHD1A6NEE1 506 aa27.56■■■□□ 2
COL16A1-215ENST00000488897 ASXL2Q76L83 1435 aa27.54■■■□□ 2
COL16A1-215ENST00000488897 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
COL16A1-215ENST00000488897 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
COL16A1-215ENST00000488897 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
COL16A1-215ENST00000488897 CCDC18Q5T9S5 1454 aa27.46■■□□□ 1.99
COL16A1-215ENST00000488897 CDK11AQ9UQ88 783 aaPredicted RBP27.44■■□□□ 1.98
COL16A1-215ENST00000488897 FAM69CQ0P6D2 419 aa27.43■■□□□ 1.98
COL16A1-215ENST00000488897 LRRC9Q6ZRR7 1453 aa27.43■■□□□ 1.98
COL16A1-215ENST00000488897 KIF14Q15058 1648 aa27.42■■□□□ 1.98
COL16A1-215ENST00000488897 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
COL16A1-215ENST00000488897 WDR7Q9Y4E6 1490 aa27.4■■□□□ 1.98
COL16A1-215ENST00000488897 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
COL16A1-215ENST00000488897 MAPKBP1O60336 1514 aa27.32■■□□□ 1.96
COL16A1-215ENST00000488897 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
COL16A1-215ENST00000488897 ZNF777Q9ULD5 760 aaPredicted RBP27.3■■□□□ 1.96
COL16A1-215ENST00000488897 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
COL16A1-215ENST00000488897 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
COL16A1-215ENST00000488897 TTC37Q6PGP7 1564 aa27.28■■□□□ 1.96
COL16A1-215ENST00000488897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.28■■□□□ 1.96
COL16A1-215ENST00000488897 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
COL16A1-215ENST00000488897 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
COL16A1-215ENST00000488897 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
COL16A1-215ENST00000488897 EHBP1L1Q8N3D4 1523 aa27.25■■□□□ 1.95
COL16A1-215ENST00000488897 TSPOAP1O95153 1857 aa27.24■■□□□ 1.95
COL16A1-215ENST00000488897 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
COL16A1-215ENST00000488897 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
COL16A1-215ENST00000488897 KIF13AQ9H1H9 1805 aa27.2■■□□□ 1.94
COL16A1-215ENST00000488897 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
COL16A1-215ENST00000488897 SUPT6HQ7KZ85 1726 aaKnown RBP27.18■■□□□ 1.94
COL16A1-215ENST00000488897 CD109Q6YHK3 1445 aa27.18■■□□□ 1.94
COL16A1-215ENST00000488897 CFDP1Q9UEE9 299 aaPredicted RBP27.16■■□□□ 1.94
COL16A1-215ENST00000488897 GPATCH8Q9UKJ3 1502 aaKnown RBP27.15■■□□□ 1.94
COL16A1-215ENST00000488897 ITGAEP38570 1179 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms