RNA–Protein interactions for RNA: ENST00000488423.1

DPH3-204, Transcript of diphthamide biosynthesis 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DPH3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPH3-204ENST00000488423 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
DPH3-204ENST00000488423 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
DPH3-204ENST00000488423 CTTNBP2Q8WZ74 1663 aa13.33□□□□□ -0.28
DPH3-204ENST00000488423 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
DPH3-204ENST00000488423 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
DPH3-204ENST00000488423 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
DPH3-204ENST00000488423 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
DPH3-204ENST00000488423 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
DPH3-204ENST00000488423 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
DPH3-204ENST00000488423 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
DPH3-204ENST00000488423 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.29
DPH3-204ENST00000488423 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
DPH3-204ENST00000488423 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
DPH3-204ENST00000488423 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
DPH3-204ENST00000488423 ITGAEP38570 1179 aa13.24□□□□□ -0.29
DPH3-204ENST00000488423 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
DPH3-204ENST00000488423 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
DPH3-204ENST00000488423 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
DPH3-204ENST00000488423 WDR62O43379 1518 aa13.23□□□□□ -0.29
DPH3-204ENST00000488423 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
DPH3-204ENST00000488423 GRIN2BQ13224 1484 aa13.21□□□□□ -0.29
DPH3-204ENST00000488423 SAMD9Q5K651 1589 aa13.21□□□□□ -0.3
DPH3-204ENST00000488423 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.3
DPH3-204ENST00000488423 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
DPH3-204ENST00000488423 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
DPH3-204ENST00000488423 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
DPH3-204ENST00000488423 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
DPH3-204ENST00000488423 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
DPH3-204ENST00000488423 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
DPH3-204ENST00000488423 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
DPH3-204ENST00000488423 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
DPH3-204ENST00000488423 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
DPH3-204ENST00000488423 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
DPH3-204ENST00000488423 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
DPH3-204ENST00000488423 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
DPH3-204ENST00000488423 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
DPH3-204ENST00000488423 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.31
DPH3-204ENST00000488423 LRRIQ1Q96JM4 1722 aa13.07□□□□□ -0.32
DPH3-204ENST00000488423 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
DPH3-204ENST00000488423 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
DPH3-204ENST00000488423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.06□□□□□ -0.32
DPH3-204ENST00000488423 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
DPH3-204ENST00000488423 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
DPH3-204ENST00000488423 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
DPH3-204ENST00000488423 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
DPH3-204ENST00000488423 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
DPH3-204ENST00000488423 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
DPH3-204ENST00000488423 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
DPH3-204ENST00000488423 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
DPH3-204ENST00000488423 FBLN2P98095 1184 aa13.04□□□□□ -0.32
DPH3-204ENST00000488423 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
DPH3-204ENST00000488423 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.32
DPH3-204ENST00000488423 ARID3CA6NKF2 412 aa13.02□□□□□ -0.33
DPH3-204ENST00000488423 EPRSP07814 1512 aaKnown RBP13.02□□□□□ -0.33
DPH3-204ENST00000488423 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
DPH3-204ENST00000488423 KIAA0556O60303 1618 aa13□□□□□ -0.33
DPH3-204ENST00000488423 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
DPH3-204ENST00000488423 DISP1Q96F81 1524 aa13□□□□□ -0.33
DPH3-204ENST00000488423 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
DPH3-204ENST00000488423 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
DPH3-204ENST00000488423 CEP170Q5SW79 1584 aa12.96□□□□□ -0.33
DPH3-204ENST00000488423 ARHGEF11O15085 1522 aa12.96□□□□□ -0.33
DPH3-204ENST00000488423 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
DPH3-204ENST00000488423 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
DPH3-204ENST00000488423 HFM1A2PYH4 1435 aa12.93□□□□□ -0.34
DPH3-204ENST00000488423 NUP160Q12769 1436 aa12.92□□□□□ -0.34
DPH3-204ENST00000488423 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
DPH3-204ENST00000488423 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
DPH3-204ENST00000488423 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
DPH3-204ENST00000488423 CARMIL2Q6F5E8 1435 aa12.92□□□□□ -0.34
DPH3-204ENST00000488423 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
DPH3-204ENST00000488423 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
DPH3-204ENST00000488423 SIN3AQ96ST3 1273 aa12.91□□□□□ -0.34
DPH3-204ENST00000488423 TCOF1Q13428 1488 aaKnown RBP12.9□□□□□ -0.34
DPH3-204ENST00000488423 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
DPH3-204ENST00000488423 NAIPQ13075 1403 aa12.89□□□□□ -0.35
DPH3-204ENST00000488423 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
DPH3-204ENST00000488423 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
DPH3-204ENST00000488423 RRP7BPQ9NSQ0 103 aa12.87□□□□□ -0.35
DPH3-204ENST00000488423 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
DPH3-204ENST00000488423 MIER1Q8N108 512 aa12.86□□□□□ -0.35
DPH3-204ENST00000488423 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
DPH3-204ENST00000488423 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
DPH3-204ENST00000488423 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
DPH3-204ENST00000488423 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
DPH3-204ENST00000488423 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
DPH3-204ENST00000488423 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
DPH3-204ENST00000488423 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
DPH3-204ENST00000488423 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
DPH3-204ENST00000488423 GCC2Q8IWJ2 1684 aa12.79□□□□□ -0.36
DPH3-204ENST00000488423 DAPK1P53355 1430 aa12.79□□□□□ -0.36
DPH3-204ENST00000488423 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
DPH3-204ENST00000488423 CFDP1Q9UEE9 299 aaPredicted RBP12.79□□□□□ -0.36
DPH3-204ENST00000488423 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
DPH3-204ENST00000488423 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.36
DPH3-204ENST00000488423 ABCA8O94911 1581 aa12.77□□□□□ -0.37
DPH3-204ENST00000488423 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
DPH3-204ENST00000488423 ABCC5O15440 1437 aa12.77□□□□□ -0.37
DPH3-204ENST00000488423 SCAF1Q9H7N4 1312 aaKnown RBP12.76□□□□□ -0.37
DPH3-204ENST00000488423 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms