RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
TM2D1-209ENST00000488410 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
TM2D1-209ENST00000488410 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
TM2D1-209ENST00000488410 SHROOM2Q13796 1616 aa17.02■□□□□ 0.31
TM2D1-209ENST00000488410 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
TM2D1-209ENST00000488410 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
TM2D1-209ENST00000488410 IGF1RP08069 1367 aa16.93■□□□□ 0.3
TM2D1-209ENST00000488410 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
TM2D1-209ENST00000488410 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
TM2D1-209ENST00000488410 CUL7Q14999 1698 aa16.89■□□□□ 0.29
TM2D1-209ENST00000488410 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
TM2D1-209ENST00000488410 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
TM2D1-209ENST00000488410 KIF13AQ9H1H9 1805 aa16.86■□□□□ 0.29
TM2D1-209ENST00000488410 PTPRGP23470 1445 aa16.8■□□□□ 0.28
TM2D1-209ENST00000488410 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
TM2D1-209ENST00000488410 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
TM2D1-209ENST00000488410 TSPOAP1O95153 1857 aa16.78■□□□□ 0.28
TM2D1-209ENST00000488410 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.28
TM2D1-209ENST00000488410 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
TM2D1-209ENST00000488410 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
TM2D1-209ENST00000488410 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
TM2D1-209ENST00000488410 DIP2BQ9P265 1576 aa16.7■□□□□ 0.26
TM2D1-209ENST00000488410 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
TM2D1-209ENST00000488410 KDM6BO15054 1643 aa16.64■□□□□ 0.25
TM2D1-209ENST00000488410 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
TM2D1-209ENST00000488410 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
TM2D1-209ENST00000488410 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
TM2D1-209ENST00000488410 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
TM2D1-209ENST00000488410 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
TM2D1-209ENST00000488410 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
TM2D1-209ENST00000488410 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.24
TM2D1-209ENST00000488410 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
TM2D1-209ENST00000488410 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
TM2D1-209ENST00000488410 KIAA0556O60303 1618 aa16.53■□□□□ 0.24
TM2D1-209ENST00000488410 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
TM2D1-209ENST00000488410 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
TM2D1-209ENST00000488410 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
TM2D1-209ENST00000488410 GLI2P10070 1586 aa16.51■□□□□ 0.23
TM2D1-209ENST00000488410 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
TM2D1-209ENST00000488410 KDM5BQ9UGL1 1544 aa16.5■□□□□ 0.23
TM2D1-209ENST00000488410 KDM4FA0A1W2PPD8 638 aa16.49■□□□□ 0.23
TM2D1-209ENST00000488410 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
TM2D1-209ENST00000488410 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
TM2D1-209ENST00000488410 TEX14Q8IWB6 1497 aa16.46■□□□□ 0.23
TM2D1-209ENST00000488410 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
TM2D1-209ENST00000488410 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
TM2D1-209ENST00000488410 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
TM2D1-209ENST00000488410 MAP3K4Q9Y6R4 1608 aa16.44■□□□□ 0.22
TM2D1-209ENST00000488410 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
TM2D1-209ENST00000488410 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
TM2D1-209ENST00000488410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
TM2D1-209ENST00000488410 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
TM2D1-209ENST00000488410 CD109Q6YHK3 1445 aa16.39■□□□□ 0.21
TM2D1-209ENST00000488410 ABCA8O94911 1581 aa16.38■□□□□ 0.21
TM2D1-209ENST00000488410 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
TM2D1-209ENST00000488410 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
TM2D1-209ENST00000488410 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
TM2D1-209ENST00000488410 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
TM2D1-209ENST00000488410 ATP10BO94823 1461 aa16.29■□□□□ 0.2
TM2D1-209ENST00000488410 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
TM2D1-209ENST00000488410 EEA1Q15075 1411 aa16.28■□□□□ 0.2
TM2D1-209ENST00000488410 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
TM2D1-209ENST00000488410 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
TM2D1-209ENST00000488410 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
TM2D1-209ENST00000488410 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
TM2D1-209ENST00000488410 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
TM2D1-209ENST00000488410 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
TM2D1-209ENST00000488410 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
TM2D1-209ENST00000488410 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
TM2D1-209ENST00000488410 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
TM2D1-209ENST00000488410 ABCA9Q8IUA7 1624 aa16.18■□□□□ 0.18
TM2D1-209ENST00000488410 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
TM2D1-209ENST00000488410 KIF21BO75037 1637 aa16.16■□□□□ 0.18
TM2D1-209ENST00000488410 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
TM2D1-209ENST00000488410 NEO1Q92859 1461 aa16.12■□□□□ 0.17
TM2D1-209ENST00000488410 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
TM2D1-209ENST00000488410 FOXD1Q16676 465 aa16.11■□□□□ 0.17
TM2D1-209ENST00000488410 HECW2Q9P2P5 1572 aa16.1■□□□□ 0.17
TM2D1-209ENST00000488410 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
TM2D1-209ENST00000488410 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
TM2D1-209ENST00000488410 AKNAQ7Z591 1439 aa16.06■□□□□ 0.16
TM2D1-209ENST00000488410 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
TM2D1-209ENST00000488410 FANCAO15360 1455 aa16.04■□□□□ 0.16
TM2D1-209ENST00000488410 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
TM2D1-209ENST00000488410 MYT1LQ9UL68 1186 aa16.03■□□□□ 0.16
TM2D1-209ENST00000488410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
TM2D1-209ENST00000488410 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
TM2D1-209ENST00000488410 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
TM2D1-209ENST00000488410 PTPRMP28827 1452 aa16■□□□□ 0.15
TM2D1-209ENST00000488410 MLECQ14165 292 aa16■□□□□ 0.15
TM2D1-209ENST00000488410 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
TM2D1-209ENST00000488410 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
TM2D1-209ENST00000488410 BCORL1Q5H9F3 1711 aa15.98■□□□□ 0.15
TM2D1-209ENST00000488410 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
TM2D1-209ENST00000488410 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
TM2D1-209ENST00000488410 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
TM2D1-209ENST00000488410 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
TM2D1-209ENST00000488410 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
TM2D1-209ENST00000488410 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
TM2D1-209ENST00000488410 PLCH2O75038 1416 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms