RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
RERE-214ENST00000488215 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
RERE-214ENST00000488215 KIAA0586Q9BVV6 1533 aa16.74■□□□□ 0.27
RERE-214ENST00000488215 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
RERE-214ENST00000488215 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
RERE-214ENST00000488215 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
RERE-214ENST00000488215 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
RERE-214ENST00000488215 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
RERE-214ENST00000488215 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
RERE-214ENST00000488215 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
RERE-214ENST00000488215 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
RERE-214ENST00000488215 KIAA0556O60303 1618 aa16.53■□□□□ 0.24
RERE-214ENST00000488215 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
RERE-214ENST00000488215 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
RERE-214ENST00000488215 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
RERE-214ENST00000488215 PTPRGP23470 1445 aa16.53■□□□□ 0.24
RERE-214ENST00000488215 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.24
RERE-214ENST00000488215 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
RERE-214ENST00000488215 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
RERE-214ENST00000488215 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
RERE-214ENST00000488215 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
RERE-214ENST00000488215 EEA1Q15075 1411 aa16.45■□□□□ 0.22
RERE-214ENST00000488215 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
RERE-214ENST00000488215 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
RERE-214ENST00000488215 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
RERE-214ENST00000488215 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
RERE-214ENST00000488215 UHRF1BP1LA0JNW5 1464 aa16.42■□□□□ 0.22
RERE-214ENST00000488215 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
RERE-214ENST00000488215 FAM9AQ8IZU1 332 aaPredicted RBP16.39■□□□□ 0.21
RERE-214ENST00000488215 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
RERE-214ENST00000488215 TSPOAP1O95153 1857 aa16.36■□□□□ 0.21
RERE-214ENST00000488215 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
RERE-214ENST00000488215 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
RERE-214ENST00000488215 KIF21BO75037 1637 aa16.35■□□□□ 0.21
RERE-214ENST00000488215 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
RERE-214ENST00000488215 ABCA8O94911 1581 aa16.33■□□□□ 0.2
RERE-214ENST00000488215 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
RERE-214ENST00000488215 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
RERE-214ENST00000488215 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
RERE-214ENST00000488215 KDM6BO15054 1643 aa16.28■□□□□ 0.2
RERE-214ENST00000488215 GLI2P10070 1586 aa16.28■□□□□ 0.2
RERE-214ENST00000488215 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
RERE-214ENST00000488215 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
RERE-214ENST00000488215 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
RERE-214ENST00000488215 PPRC1Q5VV67 1664 aaKnown RBP16.25■□□□□ 0.19
RERE-214ENST00000488215 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
RERE-214ENST00000488215 MAP3K4Q9Y6R4 1608 aa16.24■□□□□ 0.19
RERE-214ENST00000488215 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
RERE-214ENST00000488215 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
RERE-214ENST00000488215 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
RERE-214ENST00000488215 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
RERE-214ENST00000488215 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
RERE-214ENST00000488215 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
RERE-214ENST00000488215 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
RERE-214ENST00000488215 ATP10BO94823 1461 aa16.15■□□□□ 0.18
RERE-214ENST00000488215 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
RERE-214ENST00000488215 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
RERE-214ENST00000488215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
RERE-214ENST00000488215 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
RERE-214ENST00000488215 CD109Q6YHK3 1445 aa16.1■□□□□ 0.17
RERE-214ENST00000488215 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
RERE-214ENST00000488215 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
RERE-214ENST00000488215 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
RERE-214ENST00000488215 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.16
RERE-214ENST00000488215 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
RERE-214ENST00000488215 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
RERE-214ENST00000488215 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
RERE-214ENST00000488215 FMN1Q68DA7 1419 aa16.03■□□□□ 0.16
RERE-214ENST00000488215 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
RERE-214ENST00000488215 PCF11O94913 1555 aaKnown RBP15.97■□□□□ 0.15
RERE-214ENST00000488215 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
RERE-214ENST00000488215 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
RERE-214ENST00000488215 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.15
RERE-214ENST00000488215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.14
RERE-214ENST00000488215 CFAP74Q9C0B2 1584 aa15.94■□□□□ 0.14
RERE-214ENST00000488215 NEO1Q92859 1461 aa15.93■□□□□ 0.14
RERE-214ENST00000488215 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
RERE-214ENST00000488215 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
RERE-214ENST00000488215 CLIP1P30622 1438 aa15.92■□□□□ 0.14
RERE-214ENST00000488215 KIF14Q15058 1648 aa15.91■□□□□ 0.14
RERE-214ENST00000488215 FRMPD1Q5SYB0 1578 aa15.9■□□□□ 0.14
RERE-214ENST00000488215 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.13
RERE-214ENST00000488215 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
RERE-214ENST00000488215 FANCAO15360 1455 aa15.89■□□□□ 0.13
RERE-214ENST00000488215 PHLDB1Q86UU1 1377 aa15.88■□□□□ 0.13
RERE-214ENST00000488215 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
RERE-214ENST00000488215 CCDC18Q5T9S5 1454 aa15.87■□□□□ 0.13
RERE-214ENST00000488215 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
RERE-214ENST00000488215 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
RERE-214ENST00000488215 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
RERE-214ENST00000488215 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
RERE-214ENST00000488215 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
RERE-214ENST00000488215 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
RERE-214ENST00000488215 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
RERE-214ENST00000488215 ARHGEF40Q8TER5 1519 aa15.82■□□□□ 0.12
RERE-214ENST00000488215 ARHGAP5Q13017 1502 aa15.8■□□□□ 0.12
RERE-214ENST00000488215 PLCH2O75038 1416 aa15.8■□□□□ 0.12
RERE-214ENST00000488215 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
RERE-214ENST00000488215 ZMYM4Q5VZL5 1548 aa15.78■□□□□ 0.12
RERE-214ENST00000488215 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms