RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 JPH4Q96JJ6 628 aa31.13■■■□□ 2.57
CCDC12-205ENST00000488069 PRG4Q92954 1404 aaPredicted RBP31.12■■■□□ 2.57
CCDC12-205ENST00000488069 CARMIL1Q5VZK9 1371 aa31.08■■■□□ 2.57
CCDC12-205ENST00000488069 KIAA0586Q9BVV6 1533 aa31.05■■■□□ 2.56
CCDC12-205ENST00000488069 RAPGEF2Q9Y4G8 1499 aa30.85■■■□□ 2.53
CCDC12-205ENST00000488069 IQGAP2Q13576 1575 aa30.82■■■□□ 2.52
CCDC12-205ENST00000488069 CARMIL2Q6F5E8 1435 aa30.75■■■□□ 2.51
CCDC12-205ENST00000488069 ADCY10Q96PN6 1610 aa30.71■■■□□ 2.51
CCDC12-205ENST00000488069 NPM1P06748 294 aaKnown RBP eCLIP30.7■■■□□ 2.51
CCDC12-205ENST00000488069 PTPRGP23470 1445 aa30.69■■■□□ 2.5
CCDC12-205ENST00000488069 TNIKQ9UKE5 1360 aa30.67■■■□□ 2.5
CCDC12-205ENST00000488069 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
CCDC12-205ENST00000488069 TTBK1Q5TCY1 1321 aaPredicted RBP30.62■■■□□ 2.49
CCDC12-205ENST00000488069 PRXQ9BXM0 1461 aa30.62■■■□□ 2.49
CCDC12-205ENST00000488069 MAPKBP1O60336 1514 aa30.62■■■□□ 2.49
CCDC12-205ENST00000488069 DISP1Q96F81 1524 aa30.62■■■□□ 2.49
CCDC12-205ENST00000488069 CTTNBP2Q8WZ74 1663 aa30.58■■■□□ 2.49
CCDC12-205ENST00000488069 KIF13AQ9H1H9 1805 aa30.58■■■□□ 2.49
CCDC12-205ENST00000488069 ABCC10Q5T3U5 1492 aa30.53■■■□□ 2.48
CCDC12-205ENST00000488069 KIAA0556O60303 1618 aa30.53■■■□□ 2.48
CCDC12-205ENST00000488069 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
CCDC12-205ENST00000488069 FAM69CQ0P6D2 419 aa30.48■■■□□ 2.47
CCDC12-205ENST00000488069 CSRNP3Q8WYN3 585 aa30.48■■■□□ 2.47
CCDC12-205ENST00000488069 UACAQ9BZF9 1416 aa30.47■■■□□ 2.47
CCDC12-205ENST00000488069 UHRF1BP1LA0JNW5 1464 aa30.47■■■□□ 2.47
CCDC12-205ENST00000488069 DIP2BQ9P265 1576 aa30.46■■■□□ 2.47
CCDC12-205ENST00000488069 EEA1Q15075 1411 aa30.46■■■□□ 2.47
CCDC12-205ENST00000488069 GOLGA3Q08378 1498 aa30.44■■■□□ 2.46
CCDC12-205ENST00000488069 PLB1Q6P1J6 1458 aa30.33■■■□□ 2.45
CCDC12-205ENST00000488069 ASXL2Q76L83 1435 aa30.33■■■□□ 2.45
CCDC12-205ENST00000488069 KDM5BQ9UGL1 1544 aa30.32■■■□□ 2.44
CCDC12-205ENST00000488069 FAM9AQ8IZU1 332 aaPredicted RBP30.27■■■□□ 2.44
CCDC12-205ENST00000488069 ZCCHC11Q5TAX3 1644 aaKnown RBP30.26■■■□□ 2.44
CCDC12-205ENST00000488069 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
CCDC12-205ENST00000488069 TSPOAP1O95153 1857 aa30.22■■■□□ 2.43
CCDC12-205ENST00000488069 ABCA8O94911 1581 aa30.21■■■□□ 2.43
CCDC12-205ENST00000488069 GLI2P10070 1586 aa30.2■■■□□ 2.43
CCDC12-205ENST00000488069 KIF21BO75037 1637 aa30.17■■■□□ 2.42
CCDC12-205ENST00000488069 SAMD9Q5K651 1589 aa30.16■■■□□ 2.42
CCDC12-205ENST00000488069 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
CCDC12-205ENST00000488069 EPRSP07814 1512 aaKnown RBP30.15■■■□□ 2.42
CCDC12-205ENST00000488069 KDM6BO15054 1643 aa30.11■■■□□ 2.41
CCDC12-205ENST00000488069 WDR7Q9Y4E6 1490 aa30.11■■■□□ 2.41
CCDC12-205ENST00000488069 PPRC1Q5VV67 1664 aaKnown RBP30.06■■■□□ 2.4
CCDC12-205ENST00000488069 MAP3K4Q9Y6R4 1608 aa30.05■■■□□ 2.4
CCDC12-205ENST00000488069 RANGAP1P46060 587 aaPredicted RBP30.04■■■□□ 2.4
CCDC12-205ENST00000488069 RAPGEF6Q8TEU7 1601 aa29.97■■■□□ 2.39
CCDC12-205ENST00000488069 TEX14Q8IWB6 1497 aa29.97■■■□□ 2.39
CCDC12-205ENST00000488069 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
CCDC12-205ENST00000488069 EFCAB5A4FU69 1503 aa29.96■■■□□ 2.39
CCDC12-205ENST00000488069 ATP10BO94823 1461 aa29.96■■■□□ 2.39
CCDC12-205ENST00000488069 ARID3CA6NKF2 412 aa29.96■■■□□ 2.39
CCDC12-205ENST00000488069 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
CCDC12-205ENST00000488069 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
CCDC12-205ENST00000488069 UBTFP17480 764 aaKnown RBP29.93■■■□□ 2.38
CCDC12-205ENST00000488069 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
CCDC12-205ENST00000488069 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
CCDC12-205ENST00000488069 CD109Q6YHK3 1445 aa29.88■■■□□ 2.37
CCDC12-205ENST00000488069 NUP153P49790 1475 aaKnown RBP29.86■■■□□ 2.37
CCDC12-205ENST00000488069 MAGI3Q5TCQ9 1506 aa29.85■■■□□ 2.37
CCDC12-205ENST00000488069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.83■■■□□ 2.37
CCDC12-205ENST00000488069 HNRNPUL2Q1KMD3 747 aaKnown RBP29.83■■■□□ 2.37
CCDC12-205ENST00000488069 COL17A1Q9UMD9 1497 aaPredicted RBP29.81■■■□□ 2.36
CCDC12-205ENST00000488069 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
CCDC12-205ENST00000488069 ARHGAP35Q9NRY4 1499 aa29.72■■■□□ 2.35
CCDC12-205ENST00000488069 FMN1Q68DA7 1419 aa29.7■■■□□ 2.34
CCDC12-205ENST00000488069 PLEKHD1A6NEE1 506 aa29.68■■■□□ 2.34
CCDC12-205ENST00000488069 HECW1Q76N89 1606 aa29.6■■■□□ 2.33
CCDC12-205ENST00000488069 KDM4FA0A1W2PPD8 638 aa29.6■■■□□ 2.33
CCDC12-205ENST00000488069 PHLDB1Q86UU1 1377 aa29.6■■■□□ 2.33
CCDC12-205ENST00000488069 CDK13Q14004 1512 aaKnown RBP29.6■■■□□ 2.33
CCDC12-205ENST00000488069 ARAP3Q8WWN8 1544 aa29.6■■■□□ 2.33
CCDC12-205ENST00000488069 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
CCDC12-205ENST00000488069 NEO1Q92859 1461 aa29.55■■■□□ 2.32
CCDC12-205ENST00000488069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.51■■■□□ 2.322e-6■■■□□ 16.6
CCDC12-205ENST00000488069 ADGRL1O94910 1474 aa29.49■■■□□ 2.31
CCDC12-205ENST00000488069 TTC37Q6PGP7 1564 aa29.47■■■□□ 2.31
CCDC12-205ENST00000488069 CDK11AQ9UQ88 783 aaPredicted RBP29.47■■■□□ 2.31
CCDC12-205ENST00000488069 CFAP74Q9C0B2 1584 aa29.43■■■□□ 2.3
CCDC12-205ENST00000488069 FANCAO15360 1455 aa29.42■■■□□ 2.3
CCDC12-205ENST00000488069 RAPGEF3O95398 923 aa29.41■■■□□ 2.3
CCDC12-205ENST00000488069 CLIP1P30622 1438 aa29.4■■■□□ 2.3
CCDC12-205ENST00000488069 PCF11O94913 1555 aaKnown RBP29.39■■■□□ 2.3
CCDC12-205ENST00000488069 CASKIN1Q8WXD9 1431 aa29.39■■■□□ 2.3
CCDC12-205ENST00000488069 AKNAQ7Z591 1439 aa29.38■■■□□ 2.29
CCDC12-205ENST00000488069 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
CCDC12-205ENST00000488069 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
CCDC12-205ENST00000488069 FRMPD1Q5SYB0 1578 aa29.36■■■□□ 2.29
CCDC12-205ENST00000488069 DENND4BO75064 1496 aaPredicted RBP29.35■■■□□ 2.29
CCDC12-205ENST00000488069 CCDC18Q5T9S5 1454 aa29.35■■■□□ 2.29
CCDC12-205ENST00000488069 KIF14Q15058 1648 aa29.34■■■□□ 2.29
CCDC12-205ENST00000488069 PLCH2O75038 1416 aa29.34■■■□□ 2.29
CCDC12-205ENST00000488069 FYCO1Q9BQS8 1478 aa29.31■■■□□ 2.28
CCDC12-205ENST00000488069 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
CCDC12-205ENST00000488069 RICTORQ6R327 1708 aa29.29■■■□□ 2.28
CCDC12-205ENST00000488069 EFCAB2Q5VUJ9 269 aa29.23■■■□□ 2.27
CCDC12-205ENST00000488069 ARHGEF40Q8TER5 1519 aa29.22■■■□□ 2.27
CCDC12-205ENST00000488069 SCAPERQ9BY12 1400 aa29.2■■■□□ 2.27
CCDC12-205ENST00000488069 ZMYM4Q5VZL5 1548 aa29.2■■■□□ 2.27
CCDC12-205ENST00000488069 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms