RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 JPH4Q96JJ6 628 aa40.38■■■■■ 4.05
RNF38-208ENST00000488058 PRG4Q92954 1404 aaPredicted RBP40.37■■■■■ 4.05
RNF38-208ENST00000488058 KIAA0586Q9BVV6 1533 aa40.3■■■■■ 4.04
RNF38-208ENST00000488058 TRHP20396 242 aaPredicted RBP40.23■■■■■ 4.03
RNF38-208ENST00000488058 RAPGEF2Q9Y4G8 1499 aa40.18■■■■■ 4.02
RNF38-208ENST00000488058 IQGAP2Q13576 1575 aa40.07■■■■■ 4.01
RNF38-208ENST00000488058 CARMIL2Q6F5E8 1435 aa39.92■■■■□ 3.98
RNF38-208ENST00000488058 TTBK1Q5TCY1 1321 aaPredicted RBP39.9■■■■□ 3.98
RNF38-208ENST00000488058 PRXQ9BXM0 1461 aa39.89■■■■□ 3.98
RNF38-208ENST00000488058 CTTNBP2Q8WZ74 1663 aa39.88■■■■□ 3.97
RNF38-208ENST00000488058 PTPRGP23470 1445 aa39.82■■■■□ 3.97
RNF38-208ENST00000488058 ADCY10Q96PN6 1610 aa39.81■■■■□ 3.96
RNF38-208ENST00000488058 CSRNP3Q8WYN3 585 aa39.81■■■■□ 3.96
RNF38-208ENST00000488058 TNIKQ9UKE5 1360 aa39.81■■■■□ 3.96
RNF38-208ENST00000488058 UGGT2Q9NYU1 1516 aa39.79■■■■□ 3.96
RNF38-208ENST00000488058 DISP1Q96F81 1524 aa39.78■■■■□ 3.96
RNF38-208ENST00000488058 NPM1P06748 294 aaKnown RBP eCLIP39.77■■■■□ 3.96
RNF38-208ENST00000488058 EEA1Q15075 1411 aa39.75■■■■□ 3.95
RNF38-208ENST00000488058 FAM9AQ8IZU1 332 aaPredicted RBP39.72■■■■□ 3.95
RNF38-208ENST00000488058 CHIC1Q5VXU3 224 aa39.71■■■■□ 3.95
RNF38-208ENST00000488058 KIAA0556O60303 1618 aa39.7■■■■□ 3.95
RNF38-208ENST00000488058 MAPKBP1O60336 1514 aa39.59■■■■□ 3.93
RNF38-208ENST00000488058 KIF13AQ9H1H9 1805 aa39.58■■■■□ 3.93
RNF38-208ENST00000488058 GOLGA3Q08378 1498 aa39.56■■■■□ 3.92
RNF38-208ENST00000488058 UACAQ9BZF9 1416 aa39.54■■■■□ 3.92
RNF38-208ENST00000488058 ABCC2Q92887 1545 aa39.5■■■■□ 3.91
RNF38-208ENST00000488058 UHRF1BP1LA0JNW5 1464 aa39.48■■■■□ 3.91
RNF38-208ENST00000488058 ABCC10Q5T3U5 1492 aa39.46■■■■□ 3.91
RNF38-208ENST00000488058 FAM69CQ0P6D2 419 aa39.44■■■■□ 3.9
RNF38-208ENST00000488058 DIP2BQ9P265 1576 aa39.42■■■■□ 3.9
RNF38-208ENST00000488058 KIF21BO75037 1637 aa39.42■■■■□ 3.9
RNF38-208ENST00000488058 P3H3Q8IVL6 736 aa39.37■■■■□ 3.89
RNF38-208ENST00000488058 PLB1Q6P1J6 1458 aa39.35■■■■□ 3.89
RNF38-208ENST00000488058 RANGAP1P46060 587 aaPredicted RBP39.33■■■■□ 3.89
RNF38-208ENST00000488058 ASXL2Q76L83 1435 aa39.31■■■■□ 3.88
RNF38-208ENST00000488058 EHMT2Q96KQ7 1210 aa39.31■■■■□ 3.88
RNF38-208ENST00000488058 ZCCHC11Q5TAX3 1644 aaKnown RBP39.31■■■■□ 3.88
RNF38-208ENST00000488058 KDM5BQ9UGL1 1544 aa39.3■■■■□ 3.88
RNF38-208ENST00000488058 SAMD9Q5K651 1589 aa39.28■■■■□ 3.88
RNF38-208ENST00000488058 ABCA8O94911 1581 aa39.26■■■■□ 3.88
RNF38-208ENST00000488058 TSPOAP1O95153 1857 aa39.22■■■■□ 3.87
RNF38-208ENST00000488058 UBTFP17480 764 aaKnown RBP39.16■■■■□ 3.86
RNF38-208ENST00000488058 GLI2P10070 1586 aa39.08■■■■□ 3.85
RNF38-208ENST00000488058 FHOD3Q2V2M9 1422 aa39.08■■■■□ 3.85
RNF38-208ENST00000488058 ARID3CA6NKF2 412 aa39.07■■■■□ 3.85
RNF38-208ENST00000488058 EPRSP07814 1512 aaKnown RBP39.07■■■■□ 3.84
RNF38-208ENST00000488058 WDR7Q9Y4E6 1490 aa39.05■■■■□ 3.84
RNF38-208ENST00000488058 EFCAB5A4FU69 1503 aa39.04■■■■□ 3.84
RNF38-208ENST00000488058 RAPGEF6Q8TEU7 1601 aa39.03■■■■□ 3.84
RNF38-208ENST00000488058 PPRC1Q5VV67 1664 aaKnown RBP38.94■■■■□ 3.82
RNF38-208ENST00000488058 KDM6BO15054 1643 aa38.94■■■■□ 3.82
RNF38-208ENST00000488058 MAP3K4Q9Y6R4 1608 aa38.94■■■■□ 3.82
RNF38-208ENST00000488058 ATP10BO94823 1461 aa38.93■■■■□ 3.82
RNF38-208ENST00000488058 KCNH8Q96L42 1107 aa38.92■■■■□ 3.82
RNF38-208ENST00000488058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.87■■■■□ 3.81
RNF38-208ENST00000488058 HNRNPUL2Q1KMD3 747 aaKnown RBP38.87■■■■□ 3.81
RNF38-208ENST00000488058 NUP153P49790 1475 aaKnown RBP38.84■■■■□ 3.81
RNF38-208ENST00000488058 ARHGAP35Q9NRY4 1499 aa38.79■■■■□ 3.8
RNF38-208ENST00000488058 CFAP43Q8NDM7 1665 aa38.78■■■■□ 3.8
RNF38-208ENST00000488058 TEX14Q8IWB6 1497 aa38.78■■■■□ 3.8
RNF38-208ENST00000488058 CD109Q6YHK3 1445 aa38.73■■■■□ 3.79
RNF38-208ENST00000488058 FMN1Q68DA7 1419 aa38.67■■■■□ 3.78
RNF38-208ENST00000488058 ATP1B4Q9UN42 357 aaPredicted RBP38.65■■■■□ 3.78
RNF38-208ENST00000488058 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.78
RNF38-208ENST00000488058 ABCA9Q8IUA7 1624 aa38.6■■■■□ 3.77
RNF38-208ENST00000488058 CDK13Q14004 1512 aaKnown RBP38.59■■■■□ 3.77
RNF38-208ENST00000488058 PLEKHD1A6NEE1 506 aa38.59■■■■□ 3.77
RNF38-208ENST00000488058 HECW1Q76N89 1606 aa38.59■■■■□ 3.77
RNF38-208ENST00000488058 COL17A1Q9UMD9 1497 aaPredicted RBP38.58■■■■□ 3.77
RNF38-208ENST00000488058 AEBP2Q6ZN18 517 aaPredicted RBP38.49■■■■□ 3.75
RNF38-208ENST00000488058 CLIP1P30622 1438 aa38.46■■■■□ 3.75
RNF38-208ENST00000488058 PCF11O94913 1555 aaKnown RBP38.4■■■■□ 3.74
RNF38-208ENST00000488058 LRRIQ1Q96JM4 1722 aa38.38■■■■□ 3.73
RNF38-208ENST00000488058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.37■■■■□ 3.73
RNF38-208ENST00000488058 TTC37Q6PGP7 1564 aa38.34■■■■□ 3.73
RNF38-208ENST00000488058 CDK11AQ9UQ88 783 aaPredicted RBP38.33■■■■□ 3.73
RNF38-208ENST00000488058 CASKIN1Q8WXD9 1431 aa38.32■■■■□ 3.73
RNF38-208ENST00000488058 NEO1Q92859 1461 aa38.3■■■■□ 3.72
RNF38-208ENST00000488058 ARAP3Q8WWN8 1544 aa38.3■■■■□ 3.72
RNF38-208ENST00000488058 PHLDB1Q86UU1 1377 aa38.29■■■■□ 3.72
RNF38-208ENST00000488058 CCDC18Q5T9S5 1454 aa38.23■■■■□ 3.71
RNF38-208ENST00000488058 FYCO1Q9BQS8 1478 aa38.22■■■■□ 3.71
RNF38-208ENST00000488058 TROQ12816 1431 aaPredicted RBP38.21■■■■□ 3.71
RNF38-208ENST00000488058 KIF14Q15058 1648 aa38.2■■■■□ 3.71
RNF38-208ENST00000488058 CFAP74Q9C0B2 1584 aa38.2■■■■□ 3.71
RNF38-208ENST00000488058 FANCAO15360 1455 aa38.2■■■■□ 3.71
RNF38-208ENST00000488058 CEP162Q5TB80 1403 aa38.2■■■■□ 3.71
RNF38-208ENST00000488058 KDM4FA0A1W2PPD8 638 aa38.16■■■■□ 3.7
RNF38-208ENST00000488058 RAPGEF3O95398 923 aa38.16■■■■□ 3.7
RNF38-208ENST00000488058 AKNAQ7Z591 1439 aa38.14■■■■□ 3.7
RNF38-208ENST00000488058 LOC105371045A0A1W2PR82 267 aa38.14■■■■□ 3.7
RNF38-208ENST00000488058 MYO5CQ9NQX4 1742 aa38.14■■■■□ 3.7
RNF38-208ENST00000488058 PLCH2O75038 1416 aa38.11■■■■□ 3.69
RNF38-208ENST00000488058 FRMPD1Q5SYB0 1578 aa38.09■■■■□ 3.69
RNF38-208ENST00000488058 ADGRL1O94910 1474 aa38.09■■■■□ 3.69
RNF38-208ENST00000488058 DENND4BO75064 1496 aaPredicted RBP38.07■■■■□ 3.68
RNF38-208ENST00000488058 RICTORQ6R327 1708 aa38.02■■■■□ 3.68
RNF38-208ENST00000488058 ARHGAP5Q13017 1502 aa37.98■■■■□ 3.67
RNF38-208ENST00000488058 EFCAB2Q5VUJ9 269 aa37.98■■■■□ 3.67
RNF38-208ENST00000488058 SCAPERQ9BY12 1400 aa37.95■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms