RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 PRG4Q92954 1404 aaPredicted RBP20.56■□□□□ 0.88
SFXN3-206ENST00000487721 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
SFXN3-206ENST00000487721 CARMIL1Q5VZK9 1371 aa20.53■□□□□ 0.88
SFXN3-206ENST00000487721 CUL7Q14999 1698 aa20.48■□□□□ 0.87
SFXN3-206ENST00000487721 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
SFXN3-206ENST00000487721 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
SFXN3-206ENST00000487721 FAM69CQ0P6D2 419 aa20.4■□□□□ 0.86
SFXN3-206ENST00000487721 KIAA0586Q9BVV6 1533 aa20.37■□□□□ 0.85
SFXN3-206ENST00000487721 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
SFXN3-206ENST00000487721 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
SFXN3-206ENST00000487721 EEA1Q15075 1411 aa20.33■□□□□ 0.84
SFXN3-206ENST00000487721 ABCC10Q5T3U5 1492 aa20.31■□□□□ 0.84
SFXN3-206ENST00000487721 KIF13AQ9H1H9 1805 aa20.29■□□□□ 0.84
SFXN3-206ENST00000487721 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.83
SFXN3-206ENST00000487721 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
SFXN3-206ENST00000487721 MAPKBP1O60336 1514 aa20.26■□□□□ 0.83
SFXN3-206ENST00000487721 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
SFXN3-206ENST00000487721 PTPRGP23470 1445 aa20.25■□□□□ 0.83
SFXN3-206ENST00000487721 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
SFXN3-206ENST00000487721 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
SFXN3-206ENST00000487721 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
SFXN3-206ENST00000487721 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
SFXN3-206ENST00000487721 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
SFXN3-206ENST00000487721 UGGT2Q9NYU1 1516 aa20.1■□□□□ 0.81
SFXN3-206ENST00000487721 ABCC2Q92887 1545 aa20.09■□□□□ 0.81
SFXN3-206ENST00000487721 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
SFXN3-206ENST00000487721 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
SFXN3-206ENST00000487721 UACAQ9BZF9 1416 aa20.06■□□□□ 0.8
SFXN3-206ENST00000487721 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
SFXN3-206ENST00000487721 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
SFXN3-206ENST00000487721 KDM6BO15054 1643 aa20.05■□□□□ 0.8
SFXN3-206ENST00000487721 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
SFXN3-206ENST00000487721 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
SFXN3-206ENST00000487721 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
SFXN3-206ENST00000487721 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
SFXN3-206ENST00000487721 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
SFXN3-206ENST00000487721 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
SFXN3-206ENST00000487721 KIF21BO75037 1637 aa19.98■□□□□ 0.79
SFXN3-206ENST00000487721 KIAA0556O60303 1618 aa19.98■□□□□ 0.79
SFXN3-206ENST00000487721 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
SFXN3-206ENST00000487721 GLI2P10070 1586 aa19.96■□□□□ 0.79
SFXN3-206ENST00000487721 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
SFXN3-206ENST00000487721 KDM5BQ9UGL1 1544 aa19.95■□□□□ 0.78
SFXN3-206ENST00000487721 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
SFXN3-206ENST00000487721 COL17A1Q9UMD9 1497 aaPredicted RBP19.87■□□□□ 0.77
SFXN3-206ENST00000487721 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
SFXN3-206ENST00000487721 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
SFXN3-206ENST00000487721 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
SFXN3-206ENST00000487721 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
SFXN3-206ENST00000487721 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
SFXN3-206ENST00000487721 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
SFXN3-206ENST00000487721 MAP3K4Q9Y6R4 1608 aa19.81■□□□□ 0.76
SFXN3-206ENST00000487721 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
SFXN3-206ENST00000487721 FHOD3Q2V2M9 1422 aa19.78■□□□□ 0.76
SFXN3-206ENST00000487721 ABCA8O94911 1581 aa19.77■□□□□ 0.76
SFXN3-206ENST00000487721 CD109Q6YHK3 1445 aa19.76■□□□□ 0.75
SFXN3-206ENST00000487721 ADGRL1O94910 1474 aa19.76■□□□□ 0.75
SFXN3-206ENST00000487721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
SFXN3-206ENST00000487721 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
SFXN3-206ENST00000487721 ARID3CA6NKF2 412 aa19.73■□□□□ 0.75
SFXN3-206ENST00000487721 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
SFXN3-206ENST00000487721 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
SFXN3-206ENST00000487721 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
SFXN3-206ENST00000487721 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
SFXN3-206ENST00000487721 ATP10BO94823 1461 aa19.67■□□□□ 0.74
SFXN3-206ENST00000487721 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
SFXN3-206ENST00000487721 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
SFXN3-206ENST00000487721 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
SFXN3-206ENST00000487721 CLIP1P30622 1438 aa19.62■□□□□ 0.73
SFXN3-206ENST00000487721 NUP153P49790 1475 aaKnown RBP19.61■□□□□ 0.73
SFXN3-206ENST00000487721 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
SFXN3-206ENST00000487721 ILDR1Q86SU0 546 aaPredicted RBP19.57■□□□□ 0.72
SFXN3-206ENST00000487721 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
SFXN3-206ENST00000487721 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
SFXN3-206ENST00000487721 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
SFXN3-206ENST00000487721 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
SFXN3-206ENST00000487721 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
SFXN3-206ENST00000487721 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
SFXN3-206ENST00000487721 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
SFXN3-206ENST00000487721 CASKIN1Q8WXD9 1431 aa19.49■□□□□ 0.71
SFXN3-206ENST00000487721 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
SFXN3-206ENST00000487721 NEO1Q92859 1461 aa19.46■□□□□ 0.71
SFXN3-206ENST00000487721 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
SFXN3-206ENST00000487721 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
SFXN3-206ENST00000487721 FYCO1Q9BQS8 1478 aa19.42■□□□□ 0.7
SFXN3-206ENST00000487721 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
SFXN3-206ENST00000487721 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
SFXN3-206ENST00000487721 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
SFXN3-206ENST00000487721 PTPRMP28827 1452 aa19.35■□□□□ 0.69
SFXN3-206ENST00000487721 AKNAQ7Z591 1439 aa19.35■□□□□ 0.69
SFXN3-206ENST00000487721 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
SFXN3-206ENST00000487721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.68
SFXN3-206ENST00000487721 FANCAO15360 1455 aa19.32■□□□□ 0.68
SFXN3-206ENST00000487721 ADAMTSL3P82987 1691 aa19.32■□□□□ 0.68
SFXN3-206ENST00000487721 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
SFXN3-206ENST00000487721 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
SFXN3-206ENST00000487721 PLCH2O75038 1416 aa19.29■□□□□ 0.68
SFXN3-206ENST00000487721 KIF14Q15058 1648 aa19.28■□□□□ 0.68
SFXN3-206ENST00000487721 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
SFXN3-206ENST00000487721 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms