RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 KIF13AQ9H1H9 1805 aa35.49■■■■□ 3.27
PHF1-208ENST00000486845 KIF27Q86VH2 1401 aa35.34■■■■□ 3.25
PHF1-208ENST00000486845 KIAA0586Q9BVV6 1533 aa35.34■■■■□ 3.25
PHF1-208ENST00000486845 NPM1P06748 294 aaKnown RBP eCLIP35.34■■■■□ 3.25
PHF1-208ENST00000486845 CUL7Q14999 1698 aa35.33■■■■□ 3.25
PHF1-208ENST00000486845 IGF1RP08069 1367 aa35.32■■■■□ 3.24
PHF1-208ENST00000486845 MAPKBP1O60336 1514 aa35.32■■■■□ 3.24
PHF1-208ENST00000486845 ABCC10Q5T3U5 1492 aa35.31■■■■□ 3.24
PHF1-208ENST00000486845 ADCY10Q96PN6 1610 aa35.28■■■■□ 3.24
PHF1-208ENST00000486845 FAM69CQ0P6D2 419 aa35.27■■■■□ 3.24
PHF1-208ENST00000486845 DIP2BQ9P265 1576 aa35.22■■■■□ 3.23
PHF1-208ENST00000486845 CARMIL1Q5VZK9 1371 aa35.1■■■■□ 3.21
PHF1-208ENST00000486845 PTPRGP23470 1445 aa35.06■■■■□ 3.2
PHF1-208ENST00000486845 CARMIL2Q6F5E8 1435 aa35.02■■■■□ 3.2
PHF1-208ENST00000486845 KDM6BO15054 1643 aa34.99■■■■□ 3.19
PHF1-208ENST00000486845 TNIKQ9UKE5 1360 aa34.99■■■■□ 3.19
PHF1-208ENST00000486845 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
PHF1-208ENST00000486845 TSPOAP1O95153 1857 aa34.96■■■■□ 3.19
PHF1-208ENST00000486845 ABCC2Q92887 1545 aa34.93■■■■□ 3.18
PHF1-208ENST00000486845 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
PHF1-208ENST00000486845 UHRF1BP1LA0JNW5 1464 aa34.84■■■■□ 3.17
PHF1-208ENST00000486845 PLB1Q6P1J6 1458 aa34.84■■■■□ 3.17
PHF1-208ENST00000486845 ASXL2Q76L83 1435 aa34.82■■■■□ 3.17
PHF1-208ENST00000486845 DISP1Q96F81 1524 aa34.8■■■■□ 3.16
PHF1-208ENST00000486845 UACAQ9BZF9 1416 aa34.79■■■■□ 3.16
PHF1-208ENST00000486845 GLI2P10070 1586 aa34.79■■■■□ 3.16
PHF1-208ENST00000486845 RAPGEF2Q9Y4G8 1499 aa34.76■■■■□ 3.15
PHF1-208ENST00000486845 UGGT2Q9NYU1 1516 aa34.73■■■■□ 3.15
PHF1-208ENST00000486845 KDM4FA0A1W2PPD8 638 aa34.72■■■■□ 3.15
PHF1-208ENST00000486845 PPRC1Q5VV67 1664 aaKnown RBP34.7■■■■□ 3.15
PHF1-208ENST00000486845 KDM5BQ9UGL1 1544 aa34.67■■■■□ 3.14
PHF1-208ENST00000486845 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
PHF1-208ENST00000486845 EPRSP07814 1512 aaKnown RBP34.61■■■■□ 3.13
PHF1-208ENST00000486845 ZCCHC11Q5TAX3 1644 aaKnown RBP34.59■■■■□ 3.13
PHF1-208ENST00000486845 MAP3K4Q9Y6R4 1608 aa34.57■■■■□ 3.12
PHF1-208ENST00000486845 TEX14Q8IWB6 1497 aa34.52■■■■□ 3.12
PHF1-208ENST00000486845 CTTNBP2Q8WZ74 1663 aa34.51■■■■□ 3.12
PHF1-208ENST00000486845 COL17A1Q9UMD9 1497 aaPredicted RBP34.46■■■■□ 3.11
PHF1-208ENST00000486845 WDR7Q9Y4E6 1490 aa34.46■■■■□ 3.11
PHF1-208ENST00000486845 GOLGA3Q08378 1498 aa34.45■■■■□ 3.1
PHF1-208ENST00000486845 ADGRL1O94910 1474 aa34.42■■■■□ 3.1
PHF1-208ENST00000486845 ABCA8O94911 1581 aa34.34■■■■□ 3.09
PHF1-208ENST00000486845 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
PHF1-208ENST00000486845 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
PHF1-208ENST00000486845 MAGI3Q5TCQ9 1506 aa34.26■■■■□ 3.08
PHF1-208ENST00000486845 CD109Q6YHK3 1445 aa34.26■■■■□ 3.07
PHF1-208ENST00000486845 KCNH8Q96L42 1107 aa34.22■■■■□ 3.07
PHF1-208ENST00000486845 FAM9AQ8IZU1 332 aaPredicted RBP34.16■■■■□ 3.06
PHF1-208ENST00000486845 HECW2Q9P2P5 1572 aa34.04■■■■□ 3.04
PHF1-208ENST00000486845 ATP10BO94823 1461 aa34.04■■■■□ 3.04
PHF1-208ENST00000486845 P3H3Q8IVL6 736 aa34.03■■■■□ 3.04
PHF1-208ENST00000486845 ARID3CA6NKF2 412 aa34.01■■■■□ 3.03
PHF1-208ENST00000486845 ARAP3Q8WWN8 1544 aa34■■■■□ 3.03
PHF1-208ENST00000486845 SAMD9Q5K651 1589 aa33.99■■■■□ 3.03
PHF1-208ENST00000486845 ILDR1Q86SU0 546 aaPredicted RBP33.96■■■■□ 3.03
PHF1-208ENST00000486845 CSRNP3Q8WYN3 585 aa33.96■■■■□ 3.03
PHF1-208ENST00000486845 ABCA9Q8IUA7 1624 aa33.96■■■■□ 3.03
PHF1-208ENST00000486845 KIF21BO75037 1637 aa33.95■■■■□ 3.03
PHF1-208ENST00000486845 PHLDB1Q86UU1 1377 aa33.93■■■■□ 3.02
PHF1-208ENST00000486845 RAPGEF6Q8TEU7 1601 aa33.93■■■■□ 3.02
PHF1-208ENST00000486845 NEO1Q92859 1461 aa33.83■■■■□ 3.01
PHF1-208ENST00000486845 EEA1Q15075 1411 aa33.82■■■■□ 3
PHF1-208ENST00000486845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.81■■■■□ 3
PHF1-208ENST00000486845 HNRNPUL2Q1KMD3 747 aaKnown RBP33.81■■■■□ 3
PHF1-208ENST00000486845 NUP153P49790 1475 aaKnown RBP33.78■■■■□ 3
PHF1-208ENST00000486845 RAPGEF3O95398 923 aa33.74■■■□□ 2.99
PHF1-208ENST00000486845 FHOD3Q2V2M9 1422 aa33.72■■■□□ 2.99
PHF1-208ENST00000486845 RANGAP1P46060 587 aaPredicted RBP33.7■■■□□ 2.99
PHF1-208ENST00000486845 ADAMTSL3P82987 1691 aa33.7■■■□□ 2.99
PHF1-208ENST00000486845 FRMPD1Q5SYB0 1578 aa33.69■■■□□ 2.98
PHF1-208ENST00000486845 PTPRMP28827 1452 aa33.66■■■□□ 2.98
PHF1-208ENST00000486845 PLEKHD1A6NEE1 506 aa33.63■■■□□ 2.97
PHF1-208ENST00000486845 EFCAB5A4FU69 1503 aa33.62■■■□□ 2.97
PHF1-208ENST00000486845 BCORL1Q5H9F3 1711 aa33.61■■■□□ 2.97
PHF1-208ENST00000486845 CFAP74Q9C0B2 1584 aa33.58■■■□□ 2.97
PHF1-208ENST00000486845 DENND4BO75064 1496 aaPredicted RBP33.57■■■□□ 2.97
PHF1-208ENST00000486845 ARID4BQ4LE39 1312 aaPredicted RBP33.57■■■□□ 2.97
PHF1-208ENST00000486845 ARHGEF40Q8TER5 1519 aa33.57■■■□□ 2.96
PHF1-208ENST00000486845 AKNAQ7Z591 1439 aa33.54■■■□□ 2.96
PHF1-208ENST00000486845 RICTORQ6R327 1708 aa33.54■■■□□ 2.96
PHF1-208ENST00000486845 FANCAO15360 1455 aa33.54■■■□□ 2.96
PHF1-208ENST00000486845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.53■■■□□ 2.96
PHF1-208ENST00000486845 MADDQ8WXG6 1647 aa33.53■■■□□ 2.96
PHF1-208ENST00000486845 TTC37Q6PGP7 1564 aa33.49■■■□□ 2.95
PHF1-208ENST00000486845 ZMYM4Q5VZL5 1548 aa33.44■■■□□ 2.94
PHF1-208ENST00000486845 CDK13Q14004 1512 aaKnown RBP33.43■■■□□ 2.94
PHF1-208ENST00000486845 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
PHF1-208ENST00000486845 RIMS1Q86UR5 1692 aaKnown RBP33.41■■■□□ 2.94
PHF1-208ENST00000486845 ZFYVE16Q7Z3T8 1539 aa33.38■■■□□ 2.93
PHF1-208ENST00000486845 POGZQ7Z3K3 1410 aa33.38■■■□□ 2.93
PHF1-208ENST00000486845 MAGI2Q86UL8 1455 aa33.37■■■□□ 2.93
PHF1-208ENST00000486845 LMTK3Q96Q04 1460 aa33.37■■■□□ 2.93
PHF1-208ENST00000486845 FBXO41Q8TF61 875 aa33.35■■■□□ 2.93
PHF1-208ENST00000486845 PLCH2O75038 1416 aa33.33■■■□□ 2.93
PHF1-208ENST00000486845 YEATS2Q9ULM3 1422 aa33.33■■■□□ 2.93
PHF1-208ENST00000486845 FMN1Q68DA7 1419 aa33.32■■■□□ 2.92
PHF1-208ENST00000486845 HECW1Q76N89 1606 aa33.31■■■□□ 2.92
PHF1-208ENST00000486845 SCAPERQ9BY12 1400 aa33.28■■■□□ 2.92
PHF1-208ENST00000486845 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
PHF1-208ENST00000486845 SIGLEC1Q9BZZ2 1709 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms