RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KIF21BO75037 1637 aa18.78■□□□□ 0.6
NUP50-216ENST00000486184 NUP160Q12769 1436 aa18.77■□□□□ 0.6
NUP50-216ENST00000486184 CTTNBP2Q8WZ74 1663 aa18.77■□□□□ 0.6
NUP50-216ENST00000486184 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
NUP50-216ENST00000486184 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
NUP50-216ENST00000486184 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
NUP50-216ENST00000486184 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
NUP50-216ENST00000486184 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
NUP50-216ENST00000486184 SHROOM2Q13796 1616 aa18.66■□□□□ 0.58
NUP50-216ENST00000486184 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
NUP50-216ENST00000486184 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
NUP50-216ENST00000486184 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
NUP50-216ENST00000486184 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
NUP50-216ENST00000486184 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
NUP50-216ENST00000486184 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
NUP50-216ENST00000486184 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
NUP50-216ENST00000486184 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
NUP50-216ENST00000486184 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
NUP50-216ENST00000486184 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
NUP50-216ENST00000486184 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
NUP50-216ENST00000486184 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
NUP50-216ENST00000486184 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
NUP50-216ENST00000486184 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
NUP50-216ENST00000486184 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
NUP50-216ENST00000486184 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
NUP50-216ENST00000486184 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
NUP50-216ENST00000486184 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
NUP50-216ENST00000486184 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
NUP50-216ENST00000486184 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
NUP50-216ENST00000486184 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NUP50-216ENST00000486184 PTPRGP23470 1445 aa18.37■□□□□ 0.53
NUP50-216ENST00000486184 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
NUP50-216ENST00000486184 CLIP1P30622 1438 aa18.32■□□□□ 0.52
NUP50-216ENST00000486184 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
NUP50-216ENST00000486184 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
NUP50-216ENST00000486184 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
NUP50-216ENST00000486184 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
NUP50-216ENST00000486184 RAPGEF6Q8TEU7 1601 aa18.26■□□□□ 0.51
NUP50-216ENST00000486184 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
NUP50-216ENST00000486184 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
NUP50-216ENST00000486184 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
NUP50-216ENST00000486184 ABCA8O94911 1581 aa18.24■□□□□ 0.51
NUP50-216ENST00000486184 PLB1Q6P1J6 1458 aa18.23■□□□□ 0.51
NUP50-216ENST00000486184 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
NUP50-216ENST00000486184 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.51
NUP50-216ENST00000486184 ADRA2BP18089 450 aa18.2■□□□□ 0.5
NUP50-216ENST00000486184 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
NUP50-216ENST00000486184 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
NUP50-216ENST00000486184 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
NUP50-216ENST00000486184 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
NUP50-216ENST00000486184 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
NUP50-216ENST00000486184 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
NUP50-216ENST00000486184 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
NUP50-216ENST00000486184 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
NUP50-216ENST00000486184 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
NUP50-216ENST00000486184 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
NUP50-216ENST00000486184 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
NUP50-216ENST00000486184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
NUP50-216ENST00000486184 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
NUP50-216ENST00000486184 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
NUP50-216ENST00000486184 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
NUP50-216ENST00000486184 ATP10BO94823 1461 aa18.05■□□□□ 0.48
NUP50-216ENST00000486184 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
NUP50-216ENST00000486184 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
NUP50-216ENST00000486184 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
NUP50-216ENST00000486184 ASXL2Q76L83 1435 aa18.03■□□□□ 0.48
NUP50-216ENST00000486184 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
NUP50-216ENST00000486184 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
NUP50-216ENST00000486184 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
NUP50-216ENST00000486184 CDK11AQ9UQ88 783 aaPredicted RBP17.98■□□□□ 0.47
NUP50-216ENST00000486184 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
NUP50-216ENST00000486184 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
NUP50-216ENST00000486184 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
NUP50-216ENST00000486184 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
NUP50-216ENST00000486184 APLP2Q06481 763 aa17.93■□□□□ 0.46
NUP50-216ENST00000486184 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
NUP50-216ENST00000486184 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
NUP50-216ENST00000486184 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
NUP50-216ENST00000486184 GLI2P10070 1586 aa17.91■□□□□ 0.46
NUP50-216ENST00000486184 KIF14Q15058 1648 aa17.91■□□□□ 0.46
NUP50-216ENST00000486184 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
NUP50-216ENST00000486184 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
NUP50-216ENST00000486184 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
NUP50-216ENST00000486184 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
NUP50-216ENST00000486184 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
NUP50-216ENST00000486184 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
NUP50-216ENST00000486184 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
NUP50-216ENST00000486184 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
NUP50-216ENST00000486184 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
NUP50-216ENST00000486184 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
NUP50-216ENST00000486184 MYO5CQ9NQX4 1742 aa17.84■□□□□ 0.45
NUP50-216ENST00000486184 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
NUP50-216ENST00000486184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
NUP50-216ENST00000486184 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
NUP50-216ENST00000486184 CD109Q6YHK3 1445 aa17.8■□□□□ 0.44
NUP50-216ENST00000486184 PPRC1Q5VV67 1664 aaKnown RBP17.79■□□□□ 0.44
NUP50-216ENST00000486184 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
NUP50-216ENST00000486184 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
NUP50-216ENST00000486184 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.43
NUP50-216ENST00000486184 CDC42BPAQ5VT25 1732 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms