RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 ADCY10Q96PN6 1610 aa18.25■□□□□ 0.51
PTPN7-213ENST00000486116 PRG4Q92954 1404 aaPredicted RBP18.24■□□□□ 0.51
PTPN7-213ENST00000486116 HECW2Q9P2P5 1572 aa18.24■□□□□ 0.51
PTPN7-213ENST00000486116 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
PTPN7-213ENST00000486116 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
PTPN7-213ENST00000486116 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
PTPN7-213ENST00000486116 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPN7-213ENST00000486116 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
PTPN7-213ENST00000486116 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
PTPN7-213ENST00000486116 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
PTPN7-213ENST00000486116 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
PTPN7-213ENST00000486116 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
PTPN7-213ENST00000486116 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
PTPN7-213ENST00000486116 GLI2P10070 1586 aa17.99■□□□□ 0.47
PTPN7-213ENST00000486116 FBXO41Q8TF61 875 aa17.98■□□□□ 0.47
PTPN7-213ENST00000486116 COL17A1Q9UMD9 1497 aaPredicted RBP17.97■□□□□ 0.47
PTPN7-213ENST00000486116 CUL7Q14999 1698 aa17.93■□□□□ 0.46
PTPN7-213ENST00000486116 MAP3K4Q9Y6R4 1608 aa17.91■□□□□ 0.46
PTPN7-213ENST00000486116 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
PTPN7-213ENST00000486116 ABCC2Q92887 1545 aa17.89■□□□□ 0.45
PTPN7-213ENST00000486116 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
PTPN7-213ENST00000486116 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
PTPN7-213ENST00000486116 PTPRGP23470 1445 aa17.82■□□□□ 0.44
PTPN7-213ENST00000486116 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
PTPN7-213ENST00000486116 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
PTPN7-213ENST00000486116 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.44
PTPN7-213ENST00000486116 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
PTPN7-213ENST00000486116 KIF21BO75037 1637 aa17.77■□□□□ 0.44
PTPN7-213ENST00000486116 TTBK1Q5TCY1 1321 aaPredicted RBP17.75■□□□□ 0.43
PTPN7-213ENST00000486116 ZCCHC11Q5TAX3 1644 aaKnown RBP17.74■□□□□ 0.43
PTPN7-213ENST00000486116 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
PTPN7-213ENST00000486116 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
PTPN7-213ENST00000486116 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
PTPN7-213ENST00000486116 CARMIL2Q6F5E8 1435 aa17.68■□□□□ 0.42
PTPN7-213ENST00000486116 IGF1RP08069 1367 aa17.66■□□□□ 0.42
PTPN7-213ENST00000486116 ADAMTSL3P82987 1691 aa17.65■□□□□ 0.42
PTPN7-213ENST00000486116 IQGAP2Q13576 1575 aa17.65■□□□□ 0.42
PTPN7-213ENST00000486116 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.42
PTPN7-213ENST00000486116 DISP1Q96F81 1524 aa17.62■□□□□ 0.41
PTPN7-213ENST00000486116 PTPRMP28827 1452 aa17.62■□□□□ 0.41
PTPN7-213ENST00000486116 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
PTPN7-213ENST00000486116 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
PTPN7-213ENST00000486116 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
PTPN7-213ENST00000486116 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
PTPN7-213ENST00000486116 SOCS7O14512 581 aa17.58■□□□□ 0.4
PTPN7-213ENST00000486116 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
PTPN7-213ENST00000486116 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
PTPN7-213ENST00000486116 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
PTPN7-213ENST00000486116 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
PTPN7-213ENST00000486116 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
PTPN7-213ENST00000486116 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
PTPN7-213ENST00000486116 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
PTPN7-213ENST00000486116 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
PTPN7-213ENST00000486116 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
PTPN7-213ENST00000486116 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
PTPN7-213ENST00000486116 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
PTPN7-213ENST00000486116 CERKQ8TCT0 537 aa17.43■□□□□ 0.38
PTPN7-213ENST00000486116 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
PTPN7-213ENST00000486116 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
PTPN7-213ENST00000486116 ABCA8O94911 1581 aa17.4■□□□□ 0.38
PTPN7-213ENST00000486116 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
PTPN7-213ENST00000486116 HSPA2P54652 639 aa17.38■□□□□ 0.37
PTPN7-213ENST00000486116 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
PTPN7-213ENST00000486116 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
PTPN7-213ENST00000486116 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
PTPN7-213ENST00000486116 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
PTPN7-213ENST00000486116 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
PTPN7-213ENST00000486116 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-213ENST00000486116 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
PTPN7-213ENST00000486116 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PTPN7-213ENST00000486116 RICTORQ6R327 1708 aa17.27■□□□□ 0.35
PTPN7-213ENST00000486116 NEO1Q92859 1461 aa17.26■□□□□ 0.35
PTPN7-213ENST00000486116 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
PTPN7-213ENST00000486116 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
PTPN7-213ENST00000486116 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
PTPN7-213ENST00000486116 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
PTPN7-213ENST00000486116 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
PTPN7-213ENST00000486116 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PTPN7-213ENST00000486116 ATP10BO94823 1461 aa17.2■□□□□ 0.34
PTPN7-213ENST00000486116 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
PTPN7-213ENST00000486116 FANCAO15360 1455 aa17.17■□□□□ 0.34
PTPN7-213ENST00000486116 POGZQ7Z3K3 1410 aa17.14■□□□□ 0.33
PTPN7-213ENST00000486116 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
PTPN7-213ENST00000486116 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
PTPN7-213ENST00000486116 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-213ENST00000486116 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
PTPN7-213ENST00000486116 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
PTPN7-213ENST00000486116 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
PTPN7-213ENST00000486116 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
PTPN7-213ENST00000486116 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
PTPN7-213ENST00000486116 LTBP4Q8N2S1 1624 aa17.09■□□□□ 0.33
PTPN7-213ENST00000486116 RAPGEF6Q8TEU7 1601 aa17.08■□□□□ 0.32
PTPN7-213ENST00000486116 ARHGEF12Q9NZN5 1544 aa17.08■□□□□ 0.32
PTPN7-213ENST00000486116 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
PTPN7-213ENST00000486116 MLECQ14165 292 aa17.05■□□□□ 0.32
PTPN7-213ENST00000486116 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
PTPN7-213ENST00000486116 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
PTPN7-213ENST00000486116 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.32
PTPN7-213ENST00000486116 MAGI2Q86UL8 1455 aa17.02■□□□□ 0.32
PTPN7-213ENST00000486116 PTPRTO14522 1441 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms