RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPNE1-226ENST00000486021 KIAA0586Q9BVV6 1533 aa12.73□□□□□ -0.37
CPNE1-226ENST00000486021 IGF1RP08069 1367 aa12.72□□□□□ -0.37
CPNE1-226ENST00000486021 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.37
CPNE1-226ENST00000486021 CARMIL2Q6F5E8 1435 aa12.7□□□□□ -0.38
CPNE1-226ENST00000486021 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
CPNE1-226ENST00000486021 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-226ENST00000486021 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
CPNE1-226ENST00000486021 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
CPNE1-226ENST00000486021 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
CPNE1-226ENST00000486021 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
CPNE1-226ENST00000486021 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
CPNE1-226ENST00000486021 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
CPNE1-226ENST00000486021 PTPRGP23470 1445 aa12.59□□□□□ -0.39
CPNE1-226ENST00000486021 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
CPNE1-226ENST00000486021 GOLGA3Q08378 1498 aa12.56□□□□□ -0.4
CPNE1-226ENST00000486021 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
CPNE1-226ENST00000486021 EEA1Q15075 1411 aa12.54□□□□□ -0.4
CPNE1-226ENST00000486021 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
CPNE1-226ENST00000486021 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
CPNE1-226ENST00000486021 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
CPNE1-226ENST00000486021 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
CPNE1-226ENST00000486021 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
CPNE1-226ENST00000486021 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
CPNE1-226ENST00000486021 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-226ENST00000486021 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
CPNE1-226ENST00000486021 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
CPNE1-226ENST00000486021 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
CPNE1-226ENST00000486021 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-226ENST00000486021 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
CPNE1-226ENST00000486021 PRXQ9BXM0 1461 aa12.46□□□□□ -0.41
CPNE1-226ENST00000486021 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
CPNE1-226ENST00000486021 KDM6BO15054 1643 aa12.44□□□□□ -0.42
CPNE1-226ENST00000486021 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
CPNE1-226ENST00000486021 GLI2P10070 1586 aa12.43□□□□□ -0.42
CPNE1-226ENST00000486021 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
CPNE1-226ENST00000486021 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
CPNE1-226ENST00000486021 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
CPNE1-226ENST00000486021 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
CPNE1-226ENST00000486021 MAP3K4Q9Y6R4 1608 aa12.37□□□□□ -0.43
CPNE1-226ENST00000486021 KIF21BO75037 1637 aa12.36□□□□□ -0.43
CPNE1-226ENST00000486021 ABCA8O94911 1581 aa12.35□□□□□ -0.43
CPNE1-226ENST00000486021 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
CPNE1-226ENST00000486021 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
CPNE1-226ENST00000486021 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
CPNE1-226ENST00000486021 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.44
CPNE1-226ENST00000486021 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
CPNE1-226ENST00000486021 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
CPNE1-226ENST00000486021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-226ENST00000486021 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
CPNE1-226ENST00000486021 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
CPNE1-226ENST00000486021 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
CPNE1-226ENST00000486021 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
CPNE1-226ENST00000486021 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
CPNE1-226ENST00000486021 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
CPNE1-226ENST00000486021 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.45
CPNE1-226ENST00000486021 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
CPNE1-226ENST00000486021 ATP10BO94823 1461 aa12.23□□□□□ -0.45
CPNE1-226ENST00000486021 PLEKHD1A6NEE1 506 aa12.23□□□□□ -0.45
CPNE1-226ENST00000486021 RANGAP1P46060 587 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-226ENST00000486021 ABCA9Q8IUA7 1624 aa12.22□□□□□ -0.45
CPNE1-226ENST00000486021 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
CPNE1-226ENST00000486021 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
CPNE1-226ENST00000486021 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-226ENST00000486021 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
CPNE1-226ENST00000486021 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
CPNE1-226ENST00000486021 NEO1Q92859 1461 aa12.17□□□□□ -0.46
CPNE1-226ENST00000486021 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
CPNE1-226ENST00000486021 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
CPNE1-226ENST00000486021 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
CPNE1-226ENST00000486021 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-226ENST00000486021 CLIP1P30622 1438 aa12.11□□□□□ -0.47
CPNE1-226ENST00000486021 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
CPNE1-226ENST00000486021 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
CPNE1-226ENST00000486021 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-226ENST00000486021 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
CPNE1-226ENST00000486021 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
CPNE1-226ENST00000486021 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
CPNE1-226ENST00000486021 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
CPNE1-226ENST00000486021 KIF14Q15058 1648 aa12.08□□□□□ -0.48
CPNE1-226ENST00000486021 FANCAO15360 1455 aa12.08□□□□□ -0.48
CPNE1-226ENST00000486021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPNE1-226ENST00000486021 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-226ENST00000486021 AKNAQ7Z591 1439 aa12.05□□□□□ -0.48
CPNE1-226ENST00000486021 RICTORQ6R327 1708 aa12.05□□□□□ -0.48
CPNE1-226ENST00000486021 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
CPNE1-226ENST00000486021 CDK13Q14004 1512 aaKnown RBP12.04□□□□□ -0.48
CPNE1-226ENST00000486021 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
CPNE1-226ENST00000486021 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
CPNE1-226ENST00000486021 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
CPNE1-226ENST00000486021 PLCH2O75038 1416 aa12.03□□□□□ -0.48
CPNE1-226ENST00000486021 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-226ENST00000486021 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-226ENST00000486021 CASKIN1Q8WXD9 1431 aa12.02□□□□□ -0.49
CPNE1-226ENST00000486021 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
CPNE1-226ENST00000486021 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
CPNE1-226ENST00000486021 RAPGEF3O95398 923 aa12□□□□□ -0.49
CPNE1-226ENST00000486021 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
CPNE1-226ENST00000486021 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
CPNE1-226ENST00000486021 ZMYM4Q5VZL5 1548 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms