RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 RBM22Q9NW64 420 aaKnown RBP eCLIP7.48□□□□□ -1.211e-17■■□□□ 12.5
CPNE1-226ENST00000486021 EFTUD2Q15029 972 aaKnown RBP eCLIP7.06□□□□□ -1.289e-17■■■■■ 37.6
CPNE1-226ENST00000486021 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.62□□□□□ -1.032e-15■■■■■ 106
CPNE1-226ENST00000486021 G3BP1Q13283 466 aaKnown RBP eCLIP9.25□□□□□ -0.934e-13■□□□□ 10.6
CPNE1-226ENST00000486021 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.011e-12■■■□□ 16.3
CPNE1-226ENST00000486021 PRPF4O43172 522 aaKnown RBP eCLIP7.24□□□□□ -1.251e-12■■□□□ 12.8
CPNE1-226ENST00000486021 RPS3P23396 243 aaKnown RBP eCLIP7.23□□□□□ -1.258e-12■□□□□ 8.6
CPNE1-226ENST00000486021 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.091e-11■■■■■ 108.6
CPNE1-226ENST00000486021 GTF2F1P35269 517 aaKnown RBP eCLIP8.24□□□□□ -1.091e-9■■■■□ 19.4
CPNE1-226ENST00000486021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.581e-8■□□□□ 10.9
CPNE1-226ENST00000486021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.95□□□□□ -1.143e-8■■■■■ 270.2
CPNE1-226ENST00000486021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.39□□□□□ -1.395e-8■■■■□ 21.5
CPNE1-226ENST00000486021 SF3B4Q15427 424 aaKnown RBP eCLIP7□□□□□ -1.298e-8■■■■■ 28.6
CPNE1-226ENST00000486021 SF3A3Q12874 501 aaKnown RBP eCLIP6.39□□□□□ -1.398e-8■■■■■ 30.1
CPNE1-226ENST00000486021 AQRO60306 1485 aaKnown RBP eCLIP13.17□□□□□ -0.39e-8■■■■□ 25.1
CPNE1-226ENST00000486021 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.952e-7■■■■□ 22.1
CPNE1-226ENST00000486021 PABPC4Q13310 644 aaKnown RBP eCLIP9.14□□□□□ -0.957e-7■■■□□ 14.8
CPNE1-226ENST00000486021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.6□□□□□ -1.198e-7■■□□□ 12
CPNE1-226ENST00000486021 EIF3HO15372 352 aaKnown RBP eCLIP7.11□□□□□ -1.271e-6■■□□□ 11.9
CPNE1-226ENST00000486021 RBM5P52756 815 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■□□ 15.7
CPNE1-226ENST00000486021 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.844e-6■■□□□ 12.1
CPNE1-226ENST00000486021 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7□□□□□ -1.294e-6■■■□□ 17.2
CPNE1-226ENST00000486021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.948e-6■■□□□ 11.7
Retrieved 23 of 23 RNA–protein pairs in 5.6 ms