RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 ERCC6L2Q5T890 1561 aa25.55■■□□□ 1.68
YIF1A-208ENST00000485820 KIAA0586Q9BVV6 1533 aa25.46■■□□□ 1.67
YIF1A-208ENST00000485820 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
YIF1A-208ENST00000485820 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
YIF1A-208ENST00000485820 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
YIF1A-208ENST00000485820 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
YIF1A-208ENST00000485820 IQGAP2Q13576 1575 aa25.25■■□□□ 1.63
YIF1A-208ENST00000485820 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
YIF1A-208ENST00000485820 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
YIF1A-208ENST00000485820 CARMIL2Q6F5E8 1435 aa25.17■■□□□ 1.62
YIF1A-208ENST00000485820 PTPRGP23470 1445 aa25.14■■□□□ 1.62
YIF1A-208ENST00000485820 EEA1Q15075 1411 aa25.13■■□□□ 1.61
YIF1A-208ENST00000485820 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
YIF1A-208ENST00000485820 UGGT2Q9NYU1 1516 aa25.13■■□□□ 1.61
YIF1A-208ENST00000485820 TNIKQ9UKE5 1360 aa25.13■■□□□ 1.61
YIF1A-208ENST00000485820 CTTNBP2Q8WZ74 1663 aa25.1■■□□□ 1.61
YIF1A-208ENST00000485820 ADCY10Q96PN6 1610 aa25.08■■□□□ 1.61
YIF1A-208ENST00000485820 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
YIF1A-208ENST00000485820 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.6
YIF1A-208ENST00000485820 NPM1P06748 294 aaKnown RBP eCLIP25.06■■□□□ 1.6
YIF1A-208ENST00000485820 KIAA0556O60303 1618 aa25.01■■□□□ 1.59
YIF1A-208ENST00000485820 UACAQ9BZF9 1416 aa24.95■■□□□ 1.59
YIF1A-208ENST00000485820 MAPKBP1O60336 1514 aa24.95■■□□□ 1.58
YIF1A-208ENST00000485820 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
YIF1A-208ENST00000485820 UHRF1BP1LA0JNW5 1464 aa24.94■■□□□ 1.58
YIF1A-208ENST00000485820 KIF13AQ9H1H9 1805 aa24.92■■□□□ 1.58
YIF1A-208ENST00000485820 ABCC2Q92887 1545 aa24.91■■□□□ 1.58
YIF1A-208ENST00000485820 ABCC10Q5T3U5 1492 aa24.89■■□□□ 1.57
YIF1A-208ENST00000485820 KIF21BO75037 1637 aa24.88■■□□□ 1.57
YIF1A-208ENST00000485820 FAM69CQ0P6D2 419 aa24.87■■□□□ 1.57
YIF1A-208ENST00000485820 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
YIF1A-208ENST00000485820 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.56
YIF1A-208ENST00000485820 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
YIF1A-208ENST00000485820 DIP2BQ9P265 1576 aa24.81■■□□□ 1.56
YIF1A-208ENST00000485820 ABCA8O94911 1581 aa24.79■■□□□ 1.56
YIF1A-208ENST00000485820 SAMD9Q5K651 1589 aa24.79■■□□□ 1.56
YIF1A-208ENST00000485820 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
YIF1A-208ENST00000485820 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
YIF1A-208ENST00000485820 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
YIF1A-208ENST00000485820 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
YIF1A-208ENST00000485820 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
YIF1A-208ENST00000485820 GLI2P10070 1586 aa24.66■■□□□ 1.54
YIF1A-208ENST00000485820 TSPOAP1O95153 1857 aa24.66■■□□□ 1.54
YIF1A-208ENST00000485820 FHOD3Q2V2M9 1422 aa24.64■■□□□ 1.54
YIF1A-208ENST00000485820 EPRSP07814 1512 aaKnown RBP24.64■■□□□ 1.53
YIF1A-208ENST00000485820 ATP10BO94823 1461 aa24.62■■□□□ 1.53
YIF1A-208ENST00000485820 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
YIF1A-208ENST00000485820 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
YIF1A-208ENST00000485820 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
YIF1A-208ENST00000485820 RAPGEF6Q8TEU7 1601 aa24.59■■□□□ 1.53
YIF1A-208ENST00000485820 KCNH8Q96L42 1107 aa24.56■■□□□ 1.52
YIF1A-208ENST00000485820 PPRC1Q5VV67 1664 aaKnown RBP24.54■■□□□ 1.52
YIF1A-208ENST00000485820 MAP3K4Q9Y6R4 1608 aa24.53■■□□□ 1.52
YIF1A-208ENST00000485820 NUP153P49790 1475 aaKnown RBP24.52■■□□□ 1.52
YIF1A-208ENST00000485820 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
YIF1A-208ENST00000485820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
YIF1A-208ENST00000485820 HNRNPUL2Q1KMD3 747 aaKnown RBP24.46■■□□□ 1.51
YIF1A-208ENST00000485820 KDM6BO15054 1643 aa24.45■■□□□ 1.5
YIF1A-208ENST00000485820 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
YIF1A-208ENST00000485820 CFAP43Q8NDM7 1665 aa24.42■■□□□ 1.5
YIF1A-208ENST00000485820 FMN1Q68DA7 1419 aa24.42■■□□□ 1.5
YIF1A-208ENST00000485820 TEX14Q8IWB6 1497 aa24.4■■□□□ 1.5
YIF1A-208ENST00000485820 PLEKHD1A6NEE1 506 aa24.39■■□□□ 1.49
YIF1A-208ENST00000485820 MAGI3Q5TCQ9 1506 aa24.39■■□□□ 1.49
YIF1A-208ENST00000485820 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
YIF1A-208ENST00000485820 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
YIF1A-208ENST00000485820 ABCA9Q8IUA7 1624 aa24.34■■□□□ 1.49
YIF1A-208ENST00000485820 CDK13Q14004 1512 aaKnown RBP24.31■■□□□ 1.48
YIF1A-208ENST00000485820 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
YIF1A-208ENST00000485820 CLIP1P30622 1438 aa24.28■■□□□ 1.48
YIF1A-208ENST00000485820 LRRIQ1Q96JM4 1722 aa24.23■■□□□ 1.47
YIF1A-208ENST00000485820 CASKIN1Q8WXD9 1431 aa24.22■■□□□ 1.47
YIF1A-208ENST00000485820 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
YIF1A-208ENST00000485820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.47
YIF1A-208ENST00000485820 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
YIF1A-208ENST00000485820 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.46
YIF1A-208ENST00000485820 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.46
YIF1A-208ENST00000485820 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
YIF1A-208ENST00000485820 NEO1Q92859 1461 aa24.16■■□□□ 1.46
YIF1A-208ENST00000485820 TTC37Q6PGP7 1564 aa24.14■■□□□ 1.45
YIF1A-208ENST00000485820 TROQ12816 1431 aaPredicted RBP24.13■■□□□ 1.45
YIF1A-208ENST00000485820 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
YIF1A-208ENST00000485820 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
YIF1A-208ENST00000485820 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
YIF1A-208ENST00000485820 KDM4FA0A1W2PPD8 638 aa24.1■■□□□ 1.45
YIF1A-208ENST00000485820 RAPGEF3O95398 923 aa24.1■■□□□ 1.45
YIF1A-208ENST00000485820 CCDC18Q5T9S5 1454 aa24.1■■□□□ 1.45
YIF1A-208ENST00000485820 PLCH2O75038 1416 aa24.09■■□□□ 1.45
YIF1A-208ENST00000485820 FANCAO15360 1455 aa24.08■■□□□ 1.45
YIF1A-208ENST00000485820 KIF14Q15058 1648 aa24.07■■□□□ 1.44
YIF1A-208ENST00000485820 AKNAQ7Z591 1439 aa24.07■■□□□ 1.44
YIF1A-208ENST00000485820 CFAP74Q9C0B2 1584 aa24.02■■□□□ 1.44
YIF1A-208ENST00000485820 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
YIF1A-208ENST00000485820 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
YIF1A-208ENST00000485820 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
YIF1A-208ENST00000485820 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
YIF1A-208ENST00000485820 RICTORQ6R327 1708 aa23.96■■□□□ 1.43
YIF1A-208ENST00000485820 SCAPERQ9BY12 1400 aa23.94■■□□□ 1.42
YIF1A-208ENST00000485820 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
YIF1A-208ENST00000485820 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms