RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 NISCHQ9Y2I1 1504 aa36.74■■■■□ 3.47
YIF1A-208ENST00000485820 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
YIF1A-208ENST00000485820 ABCC9O60706 1549 aa32.21■■■□□ 2.75
YIF1A-208ENST00000485820 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
YIF1A-208ENST00000485820 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
YIF1A-208ENST00000485820 NACADO15069 1562 aa30.81■■■□□ 2.52
YIF1A-208ENST00000485820 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
YIF1A-208ENST00000485820 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
YIF1A-208ENST00000485820 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
YIF1A-208ENST00000485820 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
YIF1A-208ENST00000485820 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
YIF1A-208ENST00000485820 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
YIF1A-208ENST00000485820 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
YIF1A-208ENST00000485820 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
YIF1A-208ENST00000485820 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
YIF1A-208ENST00000485820 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
YIF1A-208ENST00000485820 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
YIF1A-208ENST00000485820 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
YIF1A-208ENST00000485820 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
YIF1A-208ENST00000485820 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
YIF1A-208ENST00000485820 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
YIF1A-208ENST00000485820 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
YIF1A-208ENST00000485820 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
YIF1A-208ENST00000485820 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
YIF1A-208ENST00000485820 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
YIF1A-208ENST00000485820 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
YIF1A-208ENST00000485820 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
YIF1A-208ENST00000485820 WIZO95785 1651 aa28■■■□□ 2.07
YIF1A-208ENST00000485820 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
YIF1A-208ENST00000485820 NESP48681 1621 aa27.84■■■□□ 2.05
YIF1A-208ENST00000485820 ERCC6Q03468 1493 aa27.73■■■□□ 2.03
YIF1A-208ENST00000485820 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
YIF1A-208ENST00000485820 TOP2AP11388 1531 aaKnown RBP27.64■■■□□ 2.02
YIF1A-208ENST00000485820 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
YIF1A-208ENST00000485820 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
YIF1A-208ENST00000485820 CUX2O14529 1486 aa27.52■■■□□ 2
YIF1A-208ENST00000485820 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
YIF1A-208ENST00000485820 CFTRP13569 1480 aa27.41■■□□□ 1.98
YIF1A-208ENST00000485820 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
YIF1A-208ENST00000485820 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
YIF1A-208ENST00000485820 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
YIF1A-208ENST00000485820 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
YIF1A-208ENST00000485820 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
YIF1A-208ENST00000485820 WDR62O43379 1518 aa27.16■■□□□ 1.94
YIF1A-208ENST00000485820 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
YIF1A-208ENST00000485820 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
YIF1A-208ENST00000485820 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
YIF1A-208ENST00000485820 DNAJC5Q9H3Z4 198 aa27.01■■□□□ 1.91
YIF1A-208ENST00000485820 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
YIF1A-208ENST00000485820 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
YIF1A-208ENST00000485820 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
YIF1A-208ENST00000485820 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
YIF1A-208ENST00000485820 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
YIF1A-208ENST00000485820 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
YIF1A-208ENST00000485820 CUX1P39880 1505 aa26.56■■□□□ 1.84
YIF1A-208ENST00000485820 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
YIF1A-208ENST00000485820 SOGA1O94964 1423 aa26.5■■□□□ 1.83
YIF1A-208ENST00000485820 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
YIF1A-208ENST00000485820 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
YIF1A-208ENST00000485820 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.832e-8■■■■■ 27.5
YIF1A-208ENST00000485820 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
YIF1A-208ENST00000485820 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
YIF1A-208ENST00000485820 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
YIF1A-208ENST00000485820 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
YIF1A-208ENST00000485820 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
YIF1A-208ENST00000485820 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
YIF1A-208ENST00000485820 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
YIF1A-208ENST00000485820 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
YIF1A-208ENST00000485820 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
YIF1A-208ENST00000485820 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
YIF1A-208ENST00000485820 CHD1O14646 1710 aa26.17■■□□□ 1.78
YIF1A-208ENST00000485820 FBLN2P98095 1184 aa26.17■■□□□ 1.78
YIF1A-208ENST00000485820 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
YIF1A-208ENST00000485820 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
YIF1A-208ENST00000485820 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
YIF1A-208ENST00000485820 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
YIF1A-208ENST00000485820 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
YIF1A-208ENST00000485820 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
YIF1A-208ENST00000485820 SYNJ2O15056 1496 aa26.03■■□□□ 1.76
YIF1A-208ENST00000485820 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
YIF1A-208ENST00000485820 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
YIF1A-208ENST00000485820 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
YIF1A-208ENST00000485820 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
YIF1A-208ENST00000485820 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
YIF1A-208ENST00000485820 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
YIF1A-208ENST00000485820 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
YIF1A-208ENST00000485820 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
YIF1A-208ENST00000485820 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
YIF1A-208ENST00000485820 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
YIF1A-208ENST00000485820 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
YIF1A-208ENST00000485820 IGF1RP08069 1367 aa25.77■■□□□ 1.72
YIF1A-208ENST00000485820 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
YIF1A-208ENST00000485820 NUP160Q12769 1436 aa25.75■■□□□ 1.71
YIF1A-208ENST00000485820 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
YIF1A-208ENST00000485820 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
YIF1A-208ENST00000485820 CUL7Q14999 1698 aa25.59■■□□□ 1.69
YIF1A-208ENST00000485820 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
YIF1A-208ENST00000485820 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
YIF1A-208ENST00000485820 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
YIF1A-208ENST00000485820 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms